; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000725 (gene) of Chayote v1 genome

Gene IDSed0000725
OrganismSechium edule (Chayote v1)
DescriptionR3H domain-containing protein 1-like isoform X1
Genome locationLG03:15560344..15564287
RNA-Seq ExpressionSed0000725
SyntenySed0000725
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001374 - R3H domain
IPR024771 - SUZ domain
IPR036867 - R3H domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595430.1 R3H domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]4.3e-13075.61Show/hide
Query:  DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVRKSIEARFPPVCLS
        D LK+KLS+VDPFL+EA+ NPRHRLTILRMELDIQRFL+NQEQQVFEFQHFPTSYLRLAAHRV+QHY LQTMV DNGIDG GRI+VR + EARFPP+CLS
Subjt:  DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVRKSIEARFPPVCLS

Query:  QIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVEKY
        QIPAK+  D+  G VK IAIRPRLNKSSDD GNGMAR+ L RT+EQR EEYDKARARIFS HGS     VLSNA  E  D+  N GDG +G RVNEVEKY
Subjt:  QIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVEKY

Query:  TIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGLNQMFRTTANTPWP
        T IK+AGSGATSRVAILRD+EKDLSDPDYDRSY R  R LPIN TP +NF P TVQ+IP SF GYH+PRNEV LGY SPSPIKT GLNQ+ RT AN PWP
Subjt:  TIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGLNQMFRTTANTPWP

Query:  CPGMPYAHTTFRAPLYHQSLSFDYLQYH
          GM +AHTTFRAPLY Q+L  +Y+QYH
Subjt:  CPGMPYAHTTFRAPLYHQSLSFDYLQYH

XP_008455743.1 PREDICTED: R3H domain-containing protein 1-like isoform X1 [Cucumis melo]4.3e-13072.14Show/hide
Query:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR
        MDSSS+S      D LK K+S+VDPFL+E +HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRV+QHY LQTMV DNGIDG GRI+V+
Subjt:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR

Query:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD
        K++EARFP +CLSQIPAK+LAD++PGHVK IA+RP+ NK SDD GN MA++S GRT+EQRKEEYDKARARIFSS  S+G+VDVLS+  TE L +  N+ D
Subjt:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD

Query:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL
          +  RVN+VEKY    +AG+GA+SRVAILRD+EKDLSDPDYDRSY+R  + LPINLTP++NF P T QNI  SF GYH+PRNEV LGY SPS IKTVGL
Subjt:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL

Query:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH
        NQM R++AN PWPC GMPY H+ F+APLY QSLSFDY+QY+
Subjt:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH

XP_011653850.1 uncharacterized protein LOC101216736 [Cucumis sativus]9.2e-13372.73Show/hide
Query:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR
        MDSSS S      D LK K+S VDPFL+EA+HNPRHRLTILRMELDIQRFLQNQ+QQ+FEFQHFPTSYLRLAAHRV+QHY LQTMV DNGIDG GRI+V+
Subjt:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR

Query:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD
        K++EARFP +CLSQIPAK+LAD++PGHVK IAIRPR NK SD+ GN MA++S  RT+EQRKEEYDKARARIFSS GS G V+VL +   E L +  N+ D
Subjt:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD

Query:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL
         V+  RVN+VEKYT + +AG+GA+SRVAILRD+EKDLSDPDYDRSY+R  + LPINLTP++NF P TVQNI  SF GYH+PRNEV LGY SPSPIKTVGL
Subjt:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL

Query:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH
        NQ+ R +AN PWPC GMPY HT F+APLY QSLSFDYLQY+
Subjt:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH

XP_023518666.1 R3H domain-containing protein 1-like [Cucurbita pepo subsp. pepo]5.9e-13276.52Show/hide
Query:  DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVRKSIEARFPPVCLS
        D  K+KLS+VDPFLVEA+HNPRHRLTILRMELDIQRFL+NQEQQVFEFQHFPTSYLRLAAHRV+QHY LQTMV DNGIDG GRI+VR + EARFPP+CLS
Subjt:  DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVRKSIEARFPPVCLS

Query:  QIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVEKY
        QIPAK+  D+  G VK IAIRPRLNKSSDD GNGMAR+ LGRT+EQR EEYDKARARIFS HGS     VLSNA  E  D+  N GDG +G RVNEVEKY
Subjt:  QIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVEKY

Query:  TIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGLNQMFRTTANTPWP
        T IK+AGSGATSRVAILRD+EKDLSDPDYDRSY R  R LPIN TP +NF P TVQ+IP SF GYH+PRNEV LGY SPSPIKT GLNQ+ RT AN PWP
Subjt:  TIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGLNQMFRTTANTPWP

Query:  CPGMPYAHTTFRAPLYHQSLSFDYLQYH
          GM +AHTTFRAPLY Q+L  DY+QYH
Subjt:  CPGMPYAHTTFRAPLYHQSLSFDYLQYH

XP_038883354.1 R3H domain-containing protein 1-like [Benincasa hispida]5.4e-13373.31Show/hide
Query:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR
        MDSSS+S      D LK K+S VDPFL+EA+HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRV+QHY LQT V DNGIDG GRI+VR
Subjt:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR

Query:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD
        K++EARFP VCLSQIPAK+ AD++PG VK IAIRPR NKSSDD GN MA++SLGR++EQRKEEYDKARARIFSS GS G+VDVLS    E LD+S N+ D
Subjt:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD

Query:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL
         V+  RVN VEK T +K+ G+GA+SRVAILRD+EKDLSDPDYDRSY+R  + LPINLTP++NF P T+QN+P SF GYH+PRNE  L Y SPS IKTVGL
Subjt:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL

Query:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH
        NQ+ R +AN PWPC GMPY HT F+APLY+QSLSFDY+QY+
Subjt:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH

TrEMBL top hitse value%identityAlignment
A0A0A0L247 Uncharacterized protein4.4e-13372.73Show/hide
Query:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR
        MDSSS S      D LK K+S VDPFL+EA+HNPRHRLTILRMELDIQRFLQNQ+QQ+FEFQHFPTSYLRLAAHRV+QHY LQTMV DNGIDG GRI+V+
Subjt:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR

Query:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD
        K++EARFP +CLSQIPAK+LAD++PGHVK IAIRPR NK SD+ GN MA++S  RT+EQRKEEYDKARARIFSS GS G V+VL +   E L +  N+ D
Subjt:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD

Query:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL
         V+  RVN+VEKYT + +AG+GA+SRVAILRD+EKDLSDPDYDRSY+R  + LPINLTP++NF P TVQNI  SF GYH+PRNEV LGY SPSPIKTVGL
Subjt:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL

Query:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH
        NQ+ R +AN PWPC GMPY HT F+APLY QSLSFDYLQY+
Subjt:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH

A0A1S3C2A6 R3H domain-containing protein 1-like isoform X12.1e-13072.14Show/hide
Query:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR
        MDSSS+S      D LK K+S+VDPFL+E +HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRV+QHY LQTMV DNGIDG GRI+V+
Subjt:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR

Query:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD
        K++EARFP +CLSQIPAK+LAD++PGHVK IA+RP+ NK SDD GN MA++S GRT+EQRKEEYDKARARIFSS  S+G+VDVLS+  TE L +  N+ D
Subjt:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD

Query:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL
          +  RVN+VEKY    +AG+GA+SRVAILRD+EKDLSDPDYDRSY+R  + LPINLTP++NF P T QNI  SF GYH+PRNEV LGY SPS IKTVGL
Subjt:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL

Query:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH
        NQM R++AN PWPC GMPY H+ F+APLY QSLSFDY+QY+
Subjt:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH

A0A5A7SJ76 R3H domain-containing protein 1-like isoform X12.1e-13072.14Show/hide
Query:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR
        MDSSS+S      D LK K+S+VDPFL+E +HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRV+QHY LQTMV DNGIDG GRI+V+
Subjt:  MDSSSSS------DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVR

Query:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD
        K++EARFP +CLSQIPAK+LAD++PGHVK IA+RP+ NK SDD GN MA++S GRT+EQRKEEYDKARARIFSS  S+G+VDVLS+  TE L +  N+ D
Subjt:  KSIEARFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD

Query:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL
          +  RVN+VEKY    +AG+GA+SRVAILRD+EKDLSDPDYDRSY+R  + LPINLTP++NF P T QNI  SF GYH+PRNEV LGY SPS IKTVGL
Subjt:  GVDGSRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGL

Query:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH
        NQM R++AN PWPC GMPY H+ F+APLY QSLSFDY+QY+
Subjt:  NQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDYLQYH

A0A6J1DP27 R3H domain-containing protein 1-like isoform X12.7e-13073.03Show/hide
Query:  SSDLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVRKSIEARFPPVC
        SSD LK K+S+VDPFLVEA+ NPRHRLTILRMELDIQ FLQNQEQQ+FEFQHF TSYLRLAAHRV+QHY LQTMV DN IDG GRI+VRK++EA+FPP+C
Subjt:  SSDLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVRKSIEARFPPVC

Query:  LSQIPAKKLADERPGHVKIIAIRPRLNKSSDDGNG-MARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVE
        LSQIPAK+ AD+  G VK IA+RPR NKSSDDG G MA++ LGRT+EQRKEEYDKARARIFSS GS G+VDV S+  TE LD+S N+ D  +G RVN+V+
Subjt:  LSQIPAKKLADERPGHVKIIAIRPRLNKSSDDGNG-MARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVE

Query:  KYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGLNQMFRTTANTP
        KY+ IK+AGSG TSRVAILRD+EKDLSDPDYDRSY R  + LPIN TP++NF P T+QNI  SF GYH+PRN+V L Y SPSPIKTVGLN + RTT N P
Subjt:  KYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGLNQMFRTTANTP

Query:  WPCPGMPYAHTTFRAPLYHQSLSFDYLQYH
        WPC GMPY HT F+ PLY QSLSF+YLQ H
Subjt:  WPCPGMPYAHTTFRAPLYHQSLSFDYLQYH

A0A6J1HM58 uncharacterized protein LOC111465900 isoform X14.6e-13075.3Show/hide
Query:  DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVRKSIEARFPPVCLS
        D LK+KLS+VDPFLVEA+ NPRHRLTILRMELDIQRFL+NQEQQVFEFQHFPTSYLRLAAHRV+QHY LQTMV DNGIDG GRI+VR + EARFPP+CLS
Subjt:  DLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVRKSIEARFPPVCLS

Query:  QIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVEKY
        QIPA++  D+ PG VK IAIRPRLNK SDD GNGMAR+ LGRT+EQR EEYDKARARIFS HGS     VL NA  E  D+  N GDG +G RVNEVEKY
Subjt:  QIPAKKLADERPGHVKIIAIRPRLNKSSDD-GNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVEKY

Query:  TIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGLNQMFRTTANTPWP
        T IK+AGSGATSRVAILRD+EKDLSDPDYDRSY R  R LPIN TP +NF P TVQ+IP SF GYH+P NEV LGY SPSPIKT GLNQ+ RT AN PWP
Subjt:  TIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGLNQMFRTTANTPWP

Query:  CPGMPYAHTTFRAPLYHQSLSFDYLQYH
          GM +AH TFRAPLY Q+L  DY+QYH
Subjt:  CPGMPYAHTTFRAPLYHQSLSFDYLQYH

SwissProt top hitse value%identityAlignment
A0JNC2 R3H domain-containing protein 21.6e-0730.13Show/hide
Query:  FLVEAV-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVSQHYSLQTMVLDNGIDGPGR-IIVRKSIEARFPPVCLSQIPAKKLA
        FLV  +  NPR R+ +L++E +I  F+ +   Q   F+ FP  TSY R+  HRV+ ++      +D+ +D  G+ +I+ K+   R P     Q  ++ + 
Subjt:  FLVEAV-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVSQHYSLQTMVLDNGIDGPGR-IIVRKSIEARFPPVCLSQIPAKKLA

Query:  DERPGHVKIIAIRPRLNKSSDDGNGMARKSL-----GRTMEQRKEEYDKARARIFS
        DE+    +   I  R + S D  +   R  L      +++E+R+EEY + R RIF+
Subjt:  DERPGHVKIIAIRPRLNKSSDDGNGMARKSL-----GRTMEQRKEEYDKARARIFS

Q15032 R3H domain-containing protein 11.9e-0825.15Show/hide
Query:  FLVEAV-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGR-IIVRKSIEARFPPVCLSQIPAKKLADE
        FLV  + +NPR R+ +L++E +I  F+ N E    +F    TSY R+  HRV+ ++      LD+ +D  G+ +IV K+   R P     Q   + + D+
Subjt:  FLVEAV-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGR-IIVRKSIEARFPPVCLSQIPAKKLADE

Query:  RPGHVKIIAIRPRLNKSSDDGNGMARKSL-----GRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVEKYTIIKNA
        +    +   I  R N S D  +   R  L      +++E+R+EEY +AR RIFS        D L +     +D  +   D     +  ++  + + K+A
Subjt:  RPGHVKIIAIRPRLNKSSDDGNGMARKSL-----GRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVEKYTIIKNA

Query:  GSGATSRVAILRDKEKDLSDP------DYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVG-LNQMFRTTANTPW
           +T+      + E   S+P      D D S     R L   +T   +F  ++V     S        +   +G  S +  ++ G +     + ++   
Subjt:  GSGATSRVAILRDKEKDLSDP------DYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVG-LNQMFRTTANTPW

Query:  PCPGMPYAHTTFRAPLY------HQSLSFD
        P PG   + ++  AP+       H SLSFD
Subjt:  PCPGMPYAHTTFRAPLY------HQSLSFD

Q80TM6 R3H domain-containing protein 21.6e-0730.13Show/hide
Query:  FLVEAV-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVSQHYSLQTMVLDNGIDGPGR-IIVRKSIEARFPPVCLSQIPAKKLA
        FLV  +  NPR R+ +L++E +I  F+ +   Q   F+ FP  TSY R+  HRV+ ++      +D+ +D  G+ +I+ K+   R P     Q  ++ + 
Subjt:  FLVEAV-HNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFP--TSYLRLAAHRVSQHYSLQTMVLDNGIDGPGR-IIVRKSIEARFPPVCLSQIPAKKLA

Query:  DERPGHVKIIAIRPRLNKSSDDGNGMARKSL-----GRTMEQRKEEYDKARARIFS
        DE+    +   I  R + S D  +   R  L      +++E+R+EEY + R RIF+
Subjt:  DERPGHVKIIAIRPRLNKSSDDGNGMARKSL-----GRTMEQRKEEYDKARARIFS

Arabidopsis top hitse value%identityAlignment
AT2G40960.1 Single-stranded nucleic acid binding R3H protein1.0e-5742.82Show/hide
Query:  MDSSSSSDLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDG-PGRIIVRKSIEA
        + S S   ++  K   VDPFLVEA+ NPRHRLTILRMELD+QRFLQ+ +QQ FEFQHFPTSYLR AAHRV+ HY L T V D G DG   RI+V KS ++
Subjt:  MDSSSSSDLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDG-PGRIIVRKSIEA

Query:  RFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDDGNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSR
        RFP   LS+IP K+    +  H+K++ I+PR  K S       +  L +++E+RKE+YD+ARARIF+   +    D  S  +  R++ S ++ +      
Subjt:  RFPPVCLSQIPAKKLADERPGHVKIIAIRPRLNKSSDDGNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSR

Query:  VN-EVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIP---TSFFGYH--MPRNEVFLGYASPSPIKTVGL
         N E +K  I +   S   SR+AILRD+EKD  DPDYDRS  R    LP++    V    +     P     F GY    P +     ++  SP  T GL
Subjt:  VN-EVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIP---TSFFGYH--MPRNEVFLGYASPSPIKTVGL

Query:  NQMFRTTA-NTPWP-CPGMPYAH-------TTFRAPLYHQSLSFDYLQ
        NQ  R  A    WP    + Y H       + F+A  Y Q LSFDY+Q
Subjt:  NQMFRTTA-NTPWP-CPGMPYAH-------TTFRAPLYHQSLSFDYLQ

AT3G10770.1 Single-stranded nucleic acid binding R3H protein1.0e-5747.68Show/hide
Query:  LKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGI---DG-PGRIIVRKSIEARFPPVC
        + +K ++VDPFLVEA+ NPRHRLTILRMELDIQ+F QN EQ  FEF  FPTSYLRLAAHRV+QHY L TM LDNG    DG   RI+V K+ E+RFP VC
Subjt:  LKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGI---DG-PGRIIVRKSIEARFPPVC

Query:  LSQIPAKKLADERPGHVKIIAIRPRLNKSS---DDGNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVD--VLSNASTERLDLSVNKGD---GVDG
        LS+IP K+  + RP   K IAI+PR  + S     G+G+ +++L R++E+RKEEYDKARARIF+S  S+ + D   L   S E  +  +N+ +    V+ 
Subjt:  LSQIPAKKLADERPGHVKIIAIRPRLNKSS---DDGNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVD--VLSNASTERLDLSVNKGD---GVDG

Query:  SRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRC---GRKLPINLTPT-VNFVPLTVQNIPTSFFGYHMPR-NEVFLGYASPSPIKTVG
        S V+ V +        SG TSRVAI+RD+EKD  DPDYDRSY R         + + P+  +F P+ +       F  HMPR ++  L Y  P       
Subjt:  SRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRC---GRKLPINLTPT-VNFVPLTVQNIPTSFFGYHMPR-NEVFLGYASPSPIKTVG

Query:  LNQMFRTTAN-TPWP-CPGMPYA
        L+      A+ TPWP  P M YA
Subjt:  LNQMFRTTAN-TPWP-CPGMPYA

AT3G10770.2 Single-stranded nucleic acid binding R3H protein1.1e-5948.59Show/hide
Query:  LKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGI---DG-PGRIIVRKSIEARFPPVC
        + +K ++VDPFLVEA+ NPRHRLTILRMELDIQ+F QN EQ  FEF  FPTSYLRLAAHRV+QHY L TM LDNG    DG   RI+V K+ E+RFP VC
Subjt:  LKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGI---DG-PGRIIVRKSIEARFPPVC

Query:  LSQIPAKKLADERPGHVKIIAIRPRLNKSS---DDGNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVD--VLSNASTERLDLSVNKGD---GVDG
        LS+IP K+  + RP   K IAI+PR  + S     G+G+ +++L R++E+RKEEYDKARARIF+S  S+ + D   L   S E  +  +N+ +    V+ 
Subjt:  LSQIPAKKLADERPGHVKIIAIRPRLNKSS---DDGNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVD--VLSNASTERLDLSVNKGD---GVDG

Query:  SRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPR-NEVFLGYASPSPIKTVGLNQM
        S V+ V +        SG TSRVAI+RD+EKD  DPDYDRSY R  R +P       +F P+ +       F  HMPR ++  L Y  P       L+  
Subjt:  SRVNEVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPR-NEVFLGYASPSPIKTVGLNQM

Query:  FRTTAN-TPWP-CPGMPYA
            A+ TPWP  P M YA
Subjt:  FRTTAN-TPWP-CPGMPYA

AT3G56680.1 Single-stranded nucleic acid binding R3H protein4.8e-6345.65Show/hide
Query:  VDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDG-PGRIIVRKSIEARFPPVCLSQIPAKKLA
        VDPFLVEA+HN RHRLTILRMELD+QR LQN EQQ FEFQHFPTSYLRLAAHRV+ HY L T V ++G DG   RI+V K+ E++FP V LS+IP  K +
Subjt:  VDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDG-PGRIIVRKSIEARFPPVCLSQIPAKKLA

Query:  DERPGHVKIIAIRPRLNKSSDDGNGMARKSLG--RTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD-GVDGSRVNEVEKYTIIKNA
        +      + ++I+ R +K S  G G   K+ G  R++E+RKEEYDKAR RIFS        D  S       + S+++ D  V  +   EV+K   I+  
Subjt:  DERPGHVKIIAIRPRLNKSSDDGNGMARKSLG--RTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGD-GVDGSRVNEVEKYTIIKNA

Query:  GSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFF-----GYH-MPRNEVFLGYASPSPIKTVGLNQMFRTTANTPWP
         SG TSRVAI RD+EKD  DPDYDR ++R  R LP+N     N  P  +Q IPT ++     GY+ +P     LG+  P P   +             WP
Subjt:  GSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFF-----GYH-MPRNEVFLGYASPSPIKTVGLNQMFRTTANTPWP

Query:  CPGMPYAHT-------TFRAPLYHQSLSFDYLQ
           M YAH        + +A    Q LSFDY+Q
Subjt:  CPGMPYAHT-------TFRAPLYHQSLSFDYLQ

AT5G05100.1 Single-stranded nucleic acid binding R3H protein3.0e-5746.27Show/hide
Query:  LKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLD-NGIDGPG-RIIVRKSIEARFPPVCLS
        +  K ++VDPFLVEA+ NPRHRLTILRMELDIQ+F Q+ EQQ +EFQ  PTSYLRL AHRV+QHY L T  L+  G+DG G RI+  K++E+R+P VCLS
Subjt:  LKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLD-NGIDGPG-RIIVRKSIEARFPPVCLS

Query:  QIPAKK-LADERPGHVKIIAIRPRLNK---SSDDGNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNAST---ERLDL-------SVNKGD
        +IP K+     RP   K IAI+PR N+    S  G+G+  K+L R++E+RKEEYDKARARIF+S  S+ + D  + A      RLD        S N+ +
Subjt:  QIPAKK-LADERPGHVKIIAIRPRLNK---SSDDGNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNAST---ERLDL-------SVNKGD

Query:  GVDGSRVN--EVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGY---HMPRNEVFLGYASPSPI
         V     N  +VE+  +I++  SG TSRVAI+RD+EKD  DPDYDR+  R  R  P    P  NF P+    IP  F       MPR +  L Y  P   
Subjt:  GVDGSRVN--EVEKYTIIKNAGSGATSRVAILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGY---HMPRNEVFLGYASPSPI

Query:  KTVGLNQMFRTTANTPWPCPGMPYAHTTFRAPLYH
            LN      + T WP   M YA T   + ++H
Subjt:  KTVGLNQMFRTTANTPWPCPGMPYAHTTFRAPLYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTTCTTCTTCTTCAGATTTGCTCAAACAGAAACTCTCTTTGGTTGACCCCTTTTTGGTCGAGGCTGTTCATAACCCTCGACACCGTTTAACCATTCTGCGGAT
GGAACTTGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGTTCGAGTTCCAACACTTTCCTACTTCGTACCTTCGACTTGCAGCTCATCGTGTTTCTCAACACT
ACAGCCTGCAAACTATGGTACTGGATAATGGCATAGATGGTCCAGGGAGGATTATAGTGAGGAAATCTATTGAAGCTCGATTCCCACCTGTCTGCTTATCTCAAATTCCT
GCAAAAAAGTTGGCTGACGAAAGACCTGGGCACGTTAAGATCATTGCCATTAGGCCGAGGCTAAATAAGTCATCTGATGATGGTAATGGTATGGCAAGGAAAAGTCTTGG
TAGGACTATGGAGCAGAGGAAGGAAGAGTATGATAAGGCTCGTGCTCGAATATTCAGTAGCCATGGGAGTGCTGGTACAGTGGATGTATTGTCCAATGCATCCACCGAGC
GGCTGGATTTGTCAGTAAACAAAGGCGACGGGGTTGATGGGAGTAGAGTGAACGAAGTGGAGAAGTATACAATTATAAAAAATGCAGGGAGTGGGGCTACGTCTCGAGTT
GCCATTTTAAGAGATAAGGAAAAGGATCTTAGTGACCCAGATTATGATCGGAGCTACAAAAGGTGTGGTAGGAAGCTTCCAATTAATCTTACTCCAACTGTGAATTTTGT
GCCTCTCACTGTGCAAAACATCCCGACTTCATTTTTCGGTTACCATATGCCAAGGAATGAGGTTTTCTTGGGCTATGCTTCTCCTTCACCTATCAAGACTGTAGGATTGA
ATCAGATGTTTAGAACCACAGCTAATACACCATGGCCATGTCCAGGGATGCCTTATGCACACACTACATTTCGGGCTCCATTGTACCATCAGTCTTTGAGCTTTGACTAT
CTGCAATACCATTGA
mRNA sequenceShow/hide mRNA sequence
CTAAAACCAAAGTCAACACCAACCAATCGCCGACACCGAAACCGCGAAGAAAGGCGAAATTAAGAACAATGGCTTTCGTAATTGTGCATCTGTTCTTGTGGGCAACTCTT
AATTCAGACAAGGAAAGTTAAATCTTTCCATTATTTTGCTACAAATTCAACAACCCTTTTTCAATTTCCCTTTCGCCATTGAACCCTTTTGCGGAGATCAGATTTCTCCA
AAAATCGTCTCTCCATCTCTACGGATTTCTCTCTCTAAGAAGAAGCTTCGAGATTCTGATTACAGTAGTGAGAGAAATTCTTTAGAGAGAGAGAGAGAACCATCACAATG
GATTCTTCTTCTTCTTCAGATTTGCTCAAACAGAAACTCTCTTTGGTTGACCCCTTTTTGGTCGAGGCTGTTCATAACCCTCGACACCGTTTAACCATTCTGCGGATGGA
ACTTGATATTCAAAGGTTTTTGCAAAACCAAGAGCAGCAGGTGTTCGAGTTCCAACACTTTCCTACTTCGTACCTTCGACTTGCAGCTCATCGTGTTTCTCAACACTACA
GCCTGCAAACTATGGTACTGGATAATGGCATAGATGGTCCAGGGAGGATTATAGTGAGGAAATCTATTGAAGCTCGATTCCCACCTGTCTGCTTATCTCAAATTCCTGCA
AAAAAGTTGGCTGACGAAAGACCTGGGCACGTTAAGATCATTGCCATTAGGCCGAGGCTAAATAAGTCATCTGATGATGGTAATGGTATGGCAAGGAAAAGTCTTGGTAG
GACTATGGAGCAGAGGAAGGAAGAGTATGATAAGGCTCGTGCTCGAATATTCAGTAGCCATGGGAGTGCTGGTACAGTGGATGTATTGTCCAATGCATCCACCGAGCGGC
TGGATTTGTCAGTAAACAAAGGCGACGGGGTTGATGGGAGTAGAGTGAACGAAGTGGAGAAGTATACAATTATAAAAAATGCAGGGAGTGGGGCTACGTCTCGAGTTGCC
ATTTTAAGAGATAAGGAAAAGGATCTTAGTGACCCAGATTATGATCGGAGCTACAAAAGGTGTGGTAGGAAGCTTCCAATTAATCTTACTCCAACTGTGAATTTTGTGCC
TCTCACTGTGCAAAACATCCCGACTTCATTTTTCGGTTACCATATGCCAAGGAATGAGGTTTTCTTGGGCTATGCTTCTCCTTCACCTATCAAGACTGTAGGATTGAATC
AGATGTTTAGAACCACAGCTAATACACCATGGCCATGTCCAGGGATGCCTTATGCACACACTACATTTCGGGCTCCATTGTACCATCAGTCTTTGAGCTTTGACTATCTG
CAATACCATTGAATACATCAGTTAGTTAGAAGATAGTGTTAATTAAAACTGATTTACTAAGCTAATTATACTATATACTTACTATGTTTCTTTCAACCCTCCAATTATAA
TTAATTGTTTTAAGATAAACCCTTTTATTTATACTTGCTATTGTTTGTAATGTATAATGCTGATCATTGAGGGCATGTTTGGATGGAGAAGAATGAAATAGTTTGAAT
Protein sequenceShow/hide protein sequence
MDSSSSSDLLKQKLSLVDPFLVEAVHNPRHRLTILRMELDIQRFLQNQEQQVFEFQHFPTSYLRLAAHRVSQHYSLQTMVLDNGIDGPGRIIVRKSIEARFPPVCLSQIP
AKKLADERPGHVKIIAIRPRLNKSSDDGNGMARKSLGRTMEQRKEEYDKARARIFSSHGSAGTVDVLSNASTERLDLSVNKGDGVDGSRVNEVEKYTIIKNAGSGATSRV
AILRDKEKDLSDPDYDRSYKRCGRKLPINLTPTVNFVPLTVQNIPTSFFGYHMPRNEVFLGYASPSPIKTVGLNQMFRTTANTPWPCPGMPYAHTTFRAPLYHQSLSFDY
LQYH