CuGenDBv2

Gene ID	Sed0000730
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Genome location	LG08:39414607..39419481
RNA-Seq Expression	Sed0000730
Synteny	Sed0000730
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0005737 - cytoplasm (cellular component) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR001841 - Zinc finger, RING-type IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR039525 - E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6572988.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-178

85.87

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Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGGAAS G QLYFCYTCNRTVT+  SSSSD+LCPNCNDSFVEE+ETPNPNPS  PNPF+SFTSEAFPPFSTGGGGNGGFPIIFS+SSSSGG+G 
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSMMNDLSALLGGGSFR    SSSLQDP+GFNPLLFLQNYLQ+ANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKSA
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IEALPNIKITEELLASDSSQCAVCKDTFELN+E KQMPCKHIYH DCI+PWLELHNSCPVCRYELPTDDPDY+QRTRGTSAPN+SQ      GDSST G 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        N G S  +SGENSQTQQMADRRVRRIAFPWPF GFG AAETS+SGGGNN GN ++P SRNRGSQNSS+PM+ED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

KAG7012172.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.2e-179

86.13

Show/hide

Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGGAAS G QLYFCYTCNRTVT+  SSSSD+LCPNCNDSFVEE+ETPNPNPS  PNPF+SFTSEAFPPFSTGGGGNGGFPIIFS+SSSSGG+G 
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSMMNDLSALLGGGSFR    SSSLQDP+GFNPLLFLQNYLQ+ANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKSA
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IEALPNIKITEELLASDSSQCAVCKDTFELN+E KQMPCKHIYH DCI+PWLELHNSCPVCRYELPTDDPDY+QRTRGTSAPN+SQ      GDSST G 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        N G S  +SGENSQTQQMADRRVRRIAFPWPF GFG AAETS+SGGGNN GN D+P SRNRGSQNSS+PM+ED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

XP_022954506.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]

9.4e-179

85.87

Show/hide

Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGGAAS G QLYFCYTCNRTVT+  SSSSD+LCPNCNDSFVEE+ETPNPNPS  PNPF+SFTSEAFPPFSTGGGGNGGFPIIFS+SSSSGG+G 
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSMMNDLSALLGGGSFR    SSSLQDP+GFNPLLFLQNYLQ+ANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKSA
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IEALPNIKITEELLASDSSQCAVCKDTFELN+E KQMPCKHIYH DCI+PWLELHNSCPVCRYELPTDDPDY+QRTRGTS+PN+SQ      GDSST G 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        N G S  +SGENSQTQQMADRRVRRIAFPWPF GFG AAETS+SGGGNN GN D+P SRNRGSQNSS+PM+ED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

XP_022994940.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima]

1.1e-179

86.4

Show/hide

Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGGAAS G QLYFCYTCNRTVT+  SSSSD+LCPNCNDSFVEE+ETPNPNPS  PNPF+SFTSEAFPPFSTGGGGNGGFPIIFS+SSSSGG+GG
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSM+NDLSALLGGGSFR    SSSLQDP+GFNPLLFLQNYLQ+ANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKSA
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IEALPNIKITEELLASDSSQCAVCKDTFELN+E KQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDY+QRTRGTSAPN+SQ      GDSST G 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        N G +  +SGENSQTQQMADRRVRRIAFPWPF GFG AAETS+SGGGNN GN D+P SRNRGSQNSS+PM+ED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

XP_023542390.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]

4.2e-179

86.13

Show/hide

Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGGAAS G QLYFCYTCNRTVT+  SSSSD+LCP+CNDSFVEE+ETPNPNPS  PNPF+SFTSEAFPPFSTGGGGNGGFPIIFS+SSSSGG+G 
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSMMNDLSALLGGGSFR    SSSLQDP+GFNPLLFLQNYLQ+ANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKSA
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IEALPNIKITEELLASDSSQCAVCKDTFELN+E KQMPCKHIYHADCI+PWLELHNSCPVCRYELPTDDPDY+QRTRGTSAPN+SQ      GDSST G 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        N G +  +SGENSQTQQMADRRVRRIAFPWPF GFG AAETS+SGGGNN GN DEP SRNRGSQNSS+PM+ED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTV3 RING-type E3 ubiquitin transferase

2.0e-174

Show/hide

Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGG ASH PQLYFCYTCNRTVT+ PSSSSD+LCPNCNDSFVEE+E+PNPNPS   NPFLSFTSEAFPPFSTGGGGNGGFPIIFS++SSSGG+GG
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSMMNDLSALLGGGS R   SSSSLQ+P+GFNPLLFLQNYLQ+ANVQLVIQNASGEAFHP SNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKSA
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IE LP+IKITEELLA+DSSQCAVCKDTFEL++  K MPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDY+QRTRG+SAPN+SQ      GDSST G 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        N   S  +S ENSQTQQM +RRVRRIAFPWPF GFGSAAETSNSGGGNN GN+DEP SRNRGSQ SS+PMQED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

A0A6J1C723 RING-type E3 ubiquitin transferase

9.5e-177

84.8

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Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGGAASHGPQLYFC+TCNRTVT+ PSSSSD+LCPNCNDSFVEE+E   PNPS  PNPFLSFTS+AFPPF  GGGGNGGFPIIFS++SSSGG+GG
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSMMNDLSALLGGGSFR    SSSLQDP+GFNPLLFLQNYLQ+ANVQLVIQNASGEAFHP SNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKSA
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IEALPNIKI+EELLASDSSQCAVCKDTFEL +E KQMPCKHIYH DCIIPWLELHNSCPVCRYELPTDDPDY+QRTRGTSAPN+SQ      GDSSTDG 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        NAG S  +S ENSQTQQM +RRVRRI+FPWPF GFGSAAETSNSGGGNN GN DEP S NRGS NSS+PMQED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

A0A6J1EDR0 RING-type E3 ubiquitin transferase

2.0e-174

Show/hide

Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGGAASHGPQL+FCYTCNRTVT+ PSSSSD+LCPNCNDSFVEE+++PNPNPS  PNPFLSFTSEAFPPFS+GGGGNGGFPIIFS++SSSGG+GG
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSMMNDLSALLGGGS R    SSSLQDP+GF+PLLFLQNYLQ+ANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKS+
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IEALPNIKITEELLASDSSQCAVCKDTFELN+E KQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDY+QR RGTSAPN+SQ      GDSS  G 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        N G S  +S ENS +Q   +RRVRRIAFPWPF GFGSAAETSNSGGGNN GN DEP SRNRG+Q+SS+PMQED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

A0A6J1GR60 RING-type E3 ubiquitin transferase

4.6e-179

85.87

Show/hide

Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGGAAS G QLYFCYTCNRTVT+  SSSSD+LCPNCNDSFVEE+ETPNPNPS  PNPF+SFTSEAFPPFSTGGGGNGGFPIIFS+SSSSGG+G 
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSMMNDLSALLGGGSFR    SSSLQDP+GFNPLLFLQNYLQ+ANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKSA
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IEALPNIKITEELLASDSSQCAVCKDTFELN+E KQMPCKHIYH DCI+PWLELHNSCPVCRYELPTDDPDY+QRTRGTS+PN+SQ      GDSST G 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        N G S  +SGENSQTQQMADRRVRRIAFPWPF GFG AAETS+SGGGNN GN D+P SRNRGSQNSS+PM+ED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

A0A6J1K0N0 RING-type E3 ubiquitin transferase

5.4e-180

86.4

Show/hide

Query:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG
        +SGD  GGGAAS G QLYFCYTCNRTVT+  SSSSD+LCPNCNDSFVEE+ETPNPNPS  PNPF+SFTSEAFPPFSTGGGGNGGFPIIFS+SSSSGG+GG
Subjt:  SSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGG

Query:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA
        GGSM+NDLSALLGGGSFR    SSSLQDP+GFNPLLFLQNYLQ+ANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP SKSA
Subjt:  GGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSA

Query:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG
        IEALPNIKITEELLASDSSQCAVCKDTFELN+E KQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDY+QRTRGTSAPN+SQ      GDSST G 
Subjt:  IEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQ-----LGDSSTDGG

Query:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID
        N G +  +SGENSQTQQMADRRVRRIAFPWPF GFG AAETS+SGGGNN GN D+P SRNRGSQNSS+PM+ED+D
Subjt:  NAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

SwissProt top hits

e value

%identity

Alignment

O22197 Probable E3 ubiquitin-protein ligase RHC1A

3.6e-32

33.81

Show/hide

Query:  YFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGGGGSMMNDLSALLGGGSF
        ++C+ C R V +      + +C  C   FVEE++    +P              F  F +  G      ++    +          M N L+        
Subjt:  YFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGGGGSMMNDLSALLGGGSF

Query:  RSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSS------NFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSAIEALPNIKITE
        R    SS  ++  G  PLL     +     +L   NA    F+  S        N GDYFFGPGLE+L +QL+     R G PP  +SAI+ALP IKI +
Subjt:  RSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSS------NFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSAIEALPNIKITE

Query:  ELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGDSSTDGGNAGDSPLSSGENSQTQ
          L S  S C VCKD FEL  E KQMPC HIYH+DCI+PWL  HNSCPVCR ELP+            S P+ SQ  + +T   N   S  SS  NS  +
Subjt:  ELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGDSSTDGGNAGDSPLSSGENSQTQ

Query:  QMADRRVRRIAFPWPFGGFG-SAAETSNSGGGNNRGNDDEPRSRNRGSQNSS
        +  + R    +  WPF   G S++ T N GG  N    DE  + ++     S
Subjt:  QMADRRVRRIAFPWPFGGFG-SAAETSNSGGGNNRGNDDEPRSRNRGSQNSS

P0CH30 E3 ubiquitin-protein ligase RING1

4.7e-72

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Query:  MSSSGDNPGGGAASH---GPQLYFCYTCNRTVTV-IPSSSSDILCPNCNDSFVEEIETPNPNPSSA-----PN--PFLSFTSEAFPPFSTGGGGNGGFPI
        MSS G+  GGG A+      + +FCY CNRTV V I   SSD  CP CN+ F+EE + PNPN  S      PN  PF         PF++        P+
Subjt:  MSSSGDNPGGGAASH---GPQLYFCYTCNRTVTV-IPSSSSDILCPNCNDSFVEEIETPNPNPSSA-----PN--PFLSFTSEAFPPFSTGGGGNGGFPI

Query:  IFSSSSSSGGVGGGGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQN-----ANVQLVIQ-NASGEAFHPSSNFNLGDYFFGPGLEQLIQ
        +F SSSS+          N+ S         S P+ S   DP  F+P  F+QN+L +     A ++ VIQ N S + F   +  N+GDYF GPGLEQLIQ
Subjt:  IFSSSSSSGGVGGGGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQN-----ANVQLVIQ-NASGEAFHPSSNFNLGDYFFGPGLEQLIQ

Query:  QLAENDPNRYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSA
        QLAENDPNRYGTPP SKSAIEALP + IT+  L S+ +QCAVC D FE   E KQMPCKH+YH DC++PWLELHNSCPVCR+ELPTDDPDY++R RG   
Subjt:  QLAENDPNRYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSA

Query:  PNQSQLGDSSTDGGNAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFG
                  T GGN GD   +SG+ S        R  RI+ PWPF   G
Subjt:  PNQSQLGDSSTDGGNAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFG

Q8LPN7 E3 ubiquitin-protein ligase RING1-like

1.0e-71

45.53

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Query:  SSGDNPGGGAAS--HGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFP---PFSTGGGGNGGFPIIFSSSSSS
        SSG N  G AA+     +++FCY CN+TVT+  SSS+D  CP CN  F+EE E PNPN S   NP  + +   FP   PFST        P+IF SS+++
Subjt:  SSGDNPGGGAAS--HGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFP---PFSTGGGGNGGFPIIFSSSSSS

Query:  -GGVGGGGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQ-----NANVQLVIQNASGEAFHPSS-----NFNLGDYFFGPGLEQLIQQLA
          G+        D  +L G      + S+      + F+P  FLQN+LQ       + + VI+N      HPS        N GDYFFGPGLEQLIQQLA
Subjt:  -GGVGGGGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQ-----NANVQLVIQNASGEAFHPSS-----NFNLGDYFFGPGLEQLIQQLA

Query:  ENDPNRYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQ
        ENDPNRYGTPP SKSAI+ALP +K+T+++L S+ +QCAVC D FE   +VKQMPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDY+ R++G+     
Subjt:  ENDPNRYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQ

Query:  SQLGDSSTDGGNAGDSPLSSGENSQTQQMADRRVRRIAFPWPF---GGFGSAAETSNSGGGN--NRGND
         Q                 S E  QT + +      I  PWPF    G GS +    +GGGN   RG D
Subjt:  SQLGDSSTDGGNAGDSPLSSGENSQTQQMADRRVRRIAFPWPF---GGFGSAAETSNSGGGN--NRGND

Q94AK4 E3 ubiquitin-protein ligase RZF1

2.1e-32

35.81

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Query:  YFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIET-PNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGGGGS-MMNDLSALL---
        ++C+ C R V +    + D +C  C   FVEEI+  P+               EAF  F         +         SG +G  GS   ++L+ LL   
Subjt:  YFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIET-PNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGGGGS-MMNDLSALL---

Query:  GGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSAIEALPNIKITEE
        G   FR +                       N++V+  + N +      +   N GDYFFGPGLE+LI+QL+    +R G PP  KS+I+ALP IKIT++
Subjt:  GGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSAIEALPNIKITEE

Query:  LLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGDSSTDGGNAGDS-------PLSSG
         L S  S C VCKD FEL  E KQMPC HIYH+DCI+PWL  HNSCPVCR ELP         +RG+S+  QS    S+    N+          P  S 
Subjt:  LLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGDSSTDGGNAGDS-------PLSSG

Query:  ENSQTQQMAD
         +S TQ   D
Subjt:  ENSQTQQMAD

Q9SNB6 E3 ubiquitin-protein ligase RDUF1

4.2e-28

32.32

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Query:  YFCYTCNRTVTV--IPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGV-----GGGGSMMNDLSA
        Y+CY+C R ++V     +++ +LCP CN  F+EEIE              S ++ A  P ST        P + S   +   +         +  N +  
Subjt:  YFCYTCNRTVTV--IPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGV-----GGGGSMMNDLSA

Query:  LLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAE-----NDPNRYGTPPTSKSAIEALP
        L GGG      +   +++ EG       + Y      +    + SG    P  + ++ +   G G E+L++QL++     N   R G PP SKSAIE+LP
Subjt:  LLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAE-----NDPNRYGTPPTSKSAIEALP

Query:  NIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTD
         ++I++    ++++ CAVC + FE   E ++MPCKHI+H DCI+PWL + NSCPVCR+ELP+D
Subjt:  NIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTD

Arabidopsis top hits

e value

%identity

Alignment

AT1G55530.1 RING/U-box superfamily protein

1.6e-38

32.47

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Query:  YFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPF------STGGGGNGGFPIIFSSSSSSGGVGGGGSMMNDLS-A
        Y+C+ C++TV   P   ++I CP C   FVEE+E  + + SS P    +  S   P              N     +  + +            NDL   
Subjt:  YFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPF------STGGGGNGGFPIIFSSSSSSGGVGGGGSMMNDLS-A

Query:  LLGGGSFRSSPSSSSLQDPEGFNPLLFLQN--------------YLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPT
        L      R   S++ LQ  +G    L +++               +  +N  + +QN++     P+   +LGDYF GPG E L+Q+LAENDPNRYGTPP 
Subjt:  LLGGGSFRSSPSSSSLQDPEGFNPLLFLQN--------------YLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPT

Query:  SKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRT-----RGTSAPNQSQLGDSS
         K A+EAL  +KI E L      QC+VC D FE+  E K MPC H +H+DC++PWLELH+SCPVCRY+LP D+      T      G+S+ + +    + 
Subjt:  SKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRT-----RGTSAPNQSQLGDSS

Query:  TDGGNAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNS
           GN         E  + ++  +      + PWPF    S+++ SN+
Subjt:  TDGGNAGDSPLSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNS

AT3G13430.1 RING/U-box superfamily protein

6.8e-34

34.48

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Query:  YFCYTCNRTVTVIPSSSSDIL-CPNCNDSFVEEIETPNPNPS--SAPNPFL-SFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGGGGSMMND------
        Y+C+ C+R  +VIP    +I+ C  C   FVEE++  + + +  S   P L    +      ST    +     I          G  G   ND      
Subjt:  YFCYTCNRTVTVIPSSSSDIL-CPNCNDSFVEEIETPNPNPS--SAPNPFL-SFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGGGGSMMND------

Query:  -----------------LSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAEND-PN
                         ++ L G  +     S ++  +P+    ++ + ++ Q   V    Q++      PS   +LGDYF GPG E L+Q+LAEND  N
Subjt:  -----------------LSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAEND-PN

Query:  RYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGD
        RYGTPP +K A+EAL  +KI + LL     QC+VC D FE+  E K+MPCKH +H+DC++PWLELH+SCPVCRY LPT D D  +    TS  + +    
Subjt:  RYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGD

Query:  SSTDGGNAGDSPLSSGENS
        S+    + G SP SS  NS
Subjt:  SSTDGGNAGDSPLSSGENS

AT3G13430.2 RING/U-box superfamily protein

6.8e-34

34.48

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Query:  YFCYTCNRTVTVIPSSSSDIL-CPNCNDSFVEEIETPNPNPS--SAPNPFL-SFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGGGGSMMND------
        Y+C+ C+R  +VIP    +I+ C  C   FVEE++  + + +  S   P L    +      ST    +     I          G  G   ND      
Subjt:  YFCYTCNRTVTVIPSSSSDIL-CPNCNDSFVEEIETPNPNPS--SAPNPFL-SFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGGGGSMMND------

Query:  -----------------LSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAEND-PN
                         ++ L G  +     S ++  +P+    ++ + ++ Q   V    Q++      PS   +LGDYF GPG E L+Q+LAEND  N
Subjt:  -----------------LSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAEND-PN

Query:  RYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGD
        RYGTPP +K A+EAL  +KI + LL     QC+VC D FE+  E K+MPCKH +H+DC++PWLELH+SCPVCRY LPT D D  +    TS  + +    
Subjt:  RYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGD

Query:  SSTDGGNAGDSPLSSGENS
        S+    + G SP SS  NS
Subjt:  SSTDGGNAGDSPLSSGENS

AT3G19950.1 RING/U-box superfamily protein

7.4e-73

45.53

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Query:  SSGDNPGGGAAS--HGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFP---PFSTGGGGNGGFPIIFSSSSSS
        SSG N  G AA+     +++FCY CN+TVT+  SSS+D  CP CN  F+EE E PNPN S   NP  + +   FP   PFST        P+IF SS+++
Subjt:  SSGDNPGGGAAS--HGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFP---PFSTGGGGNGGFPIIFSSSSSS

Query:  -GGVGGGGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQ-----NANVQLVIQNASGEAFHPSS-----NFNLGDYFFGPGLEQLIQQLA
          G+        D  +L G      + S+      + F+P  FLQN+LQ       + + VI+N      HPS        N GDYFFGPGLEQLIQQLA
Subjt:  -GGVGGGGSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQ-----NANVQLVIQNASGEAFHPSS-----NFNLGDYFFGPGLEQLIQQLA

Query:  ENDPNRYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQ
        ENDPNRYGTPP SKSAI+ALP +K+T+++L S+ +QCAVC D FE   +VKQMPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDY+ R++G+     
Subjt:  ENDPNRYGTPPTSKSAIEALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQ

Query:  SQLGDSSTDGGNAGDSPLSSGENSQTQQMADRRVRRIAFPWPF---GGFGSAAETSNSGGGN--NRGND
         Q                 S E  QT + +      I  PWPF    G GS +    +GGGN   RG D
Subjt:  SQLGDSSTDGGNAGDSPLSSGENSQTQQMADRRVRRIAFPWPF---GGFGSAAETSNSGGGN--NRGND

AT5G56340.1 RING/U-box superfamily protein

1.8e-39

37.74

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Query:  GSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSAI
        G+++  L  +  G +     S ++  +    + ++ +  Y    N  LV+ +   +  HPS   +LGDYF GPGL+ L+Q LAENDPNR GTPP  K A+
Subjt:  GSMMNDLSALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSAI

Query:  EALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGDSSTDGGNAGDSP
        EALP +KI E L      QC+VC D FE   E K+MPCKH +H  CI+PWLELH+SCPVCR+ELP+   D    T+  S           T  GN  ++ 
Subjt:  EALPNIKITEELLASDSSQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGDSSTDGGNAGDSP

Query:  LSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGS
        + + +  +  ++     RR +FPWPF G  S++ +S+S    ++  ++   SR+ GS
Subjt:  LSSGENSQTQQMADRRVRRIAFPWPFGGFGSAAETSNSGGGNNRGNDDEPRSRNRGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCATCGTCCGGTGATAATCCTGGCGGCGGCGCCGCCTCGCACGGCCCACAGCTCTACTTCTGCTATACGTGCAATCGTACGGTAACCGTTATTCCCTCATCTTCCTC
CGATATTTTGTGCCCCAACTGCAACGATAGCTTCGTCGAAGAAATCGAAACTCCAAACCCTAACCCTAGCTCTGCTCCCAATCCTTTCCTCTCCTTCACATCCGAGGCGT
TTCCGCCGTTCAGCACCGGTGGCGGTGGAAATGGCGGTTTCCCGATCATATTCTCCTCCTCGTCGTCTTCCGGTGGCGTTGGCGGTGGGGGTTCTATGATGAATGATCTC
TCGGCGCTGTTGGGCGGCGGTTCTTTTCGATCGTCGCCGTCGTCGTCGTCGTTGCAGGACCCTGAAGGTTTTAATCCCTTGCTGTTTCTTCAGAACTATCTCCAAAACGC
TAATGTTCAATTGGTAATCCAAAACGCTTCGGGAGAGGCTTTTCATCCCTCTTCCAATTTCAATCTTGGCGACTACTTCTTTGGCCCCGGGCTCGAGCAGTTGATTCAAC
AACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCAACTTCGAAGTCAGCGATCGAGGCACTTCCAAATATCAAAATTACAGAGGAATTGTTGGCGTCCGATTCT
TCGCAGTGTGCTGTATGCAAGGACACGTTTGAGCTCAACCAGGAGGTGAAACAGATGCCCTGTAAACACATTTATCATGCAGATTGTATCATTCCCTGGTTGGAATTGCA
CAATTCTTGTCCCGTGTGTCGATACGAATTGCCCACGGATGATCCCGATTACAAGCAAAGGACTCGTGGGACTTCAGCTCCTAATCAAAGTCAATTGGGCGATTCTTCTA
CTGATGGGGGAAATGCTGGTGATAGCCCTCTTAGTTCTGGAGAGAATTCACAGACGCAACAAATGGCTGATCGGAGGGTGAGAAGGATAGCTTTTCCTTGGCCATTTGGA
GGTTTCGGTTCAGCTGCTGAAACAAGTAACAGCGGGGGTGGCAACAACCGTGGAAATGACGACGAACCTAGATCCAGAAATAGGGGAAGTCAGAACTCTTCAGACCCTAT
GCAGGAAGATATTGATTGA

mRNA sequence

Show/hide mRNA sequence

AAGAAAACGAGTTATTTAAAATGAAAATAGAATCTGCTAAATCTGTTTCTCTGGTCTTCCTCGCTTCCTTCTCCGCACCATTCGCGCTCGAATTTCACAATACCGTTCTT
TAATCTCTCCTTCTATCATAAAAGCTTGAGCGAAAAAAATATCTTCAATCTAGAGGTCTCGGTTTGATCGGAATGTCATCGTCCGGTGATAATCCTGGCGGCGGCGCCGC
CTCGCACGGCCCACAGCTCTACTTCTGCTATACGTGCAATCGTACGGTAACCGTTATTCCCTCATCTTCCTCCGATATTTTGTGCCCCAACTGCAACGATAGCTTCGTCG
AAGAAATCGAAACTCCAAACCCTAACCCTAGCTCTGCTCCCAATCCTTTCCTCTCCTTCACATCCGAGGCGTTTCCGCCGTTCAGCACCGGTGGCGGTGGAAATGGCGGT
TTCCCGATCATATTCTCCTCCTCGTCGTCTTCCGGTGGCGTTGGCGGTGGGGGTTCTATGATGAATGATCTCTCGGCGCTGTTGGGCGGCGGTTCTTTTCGATCGTCGCC
GTCGTCGTCGTCGTTGCAGGACCCTGAAGGTTTTAATCCCTTGCTGTTTCTTCAGAACTATCTCCAAAACGCTAATGTTCAATTGGTAATCCAAAACGCTTCGGGAGAGG
CTTTTCATCCCTCTTCCAATTTCAATCTTGGCGACTACTTCTTTGGCCCCGGGCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCT
CCAACTTCGAAGTCAGCGATCGAGGCACTTCCAAATATCAAAATTACAGAGGAATTGTTGGCGTCCGATTCTTCGCAGTGTGCTGTATGCAAGGACACGTTTGAGCTCAA
CCAGGAGGTGAAACAGATGCCCTGTAAACACATTTATCATGCAGATTGTATCATTCCCTGGTTGGAATTGCACAATTCTTGTCCCGTGTGTCGATACGAATTGCCCACGG
ATGATCCCGATTACAAGCAAAGGACTCGTGGGACTTCAGCTCCTAATCAAAGTCAATTGGGCGATTCTTCTACTGATGGGGGAAATGCTGGTGATAGCCCTCTTAGTTCT
GGAGAGAATTCACAGACGCAACAAATGGCTGATCGGAGGGTGAGAAGGATAGCTTTTCCTTGGCCATTTGGAGGTTTCGGTTCAGCTGCTGAAACAAGTAACAGCGGGGG
TGGCAACAACCGTGGAAATGACGACGAACCTAGATCCAGAAATAGGGGAAGTCAGAACTCTTCAGACCCTATGCAGGAAGATATTGATTGAGGATTACTGGTGTGCAAGT
GATTTGAATCTGGAACCGTTACTGAATATAGAAAACATCCTTATATGTTGATTATTAGAGGTTTCCATATATGAGATTTGACTATAATAATCCAAAGTCAAAAGTGATTA
CATGCTGTTCAATGGTTTATCGATGGACTGATCTCTTCTCCCCCTCGGCCAATGTTACCGTGTAAATAAATTGCTCAAAGATCCTCGACATCCATCGGCCCGAGGAGTCG
ATGTGGTTGAAGATTCAAGGCTTGCTAGACGGAAAAATAGAGGTAAGAGTAAATATTGGTTTGGAAAACTTTGTATCTGTATTGAGTCGAGTACATTTTTGGCACTGACT
GATGCATTCACATTTGATATTAGCCGGACATTTTTGTAACACTTTCACTTGGTTTTAGGTAAGAAAAAACATTTTATATTAGCCACACAGATTTGAGCATTGGCCCTTGT
CCGGGATAGTGATATCTCAGCCAGCACAATATATGGGCGATTTCCCTTCGATATCAACAATTATTTTCCTGGCCACATCATTCTTATTCACAAGCAATCTCGTTCAAGAC
TGCATTGTGGTTATACATGTTAATTAATCCAATTTTATTCATATATTTTATTTGAGTTCAACAAAATTCTATACCCTTAAATGCAAGGGGAAAACCAAAAATCATAAATC
TACCATAAATTTAATCATTTAGGTGGGTTTGTATTAAAAGAAAAATCGTTTTGTTGCCGACATATTTTTTCTTCCTTTCCATCTAATTTAGAGGACGAGATTTAGGTCTG
AATGTTCACATTATGTTTCATAGAGATTCTTTTTTCTTTCGGATTAGCTTTTAATTTTTGATGAATTTCTTATGTAATTGAACTAATACTTTTATTTATTAGACTAGGTT
CCGTATGATAGCACTTATTACTATAAATAAAAAAGGGCCACATAGTCAACTAGGGTTCCTTATGATAT

Protein sequence

Show/hide protein sequence

MSSSGDNPGGGAASHGPQLYFCYTCNRTVTVIPSSSSDILCPNCNDSFVEEIETPNPNPSSAPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSSSSSSGGVGGGGSMMNDL
SALLGGGSFRSSPSSSSLQDPEGFNPLLFLQNYLQNANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPTSKSAIEALPNIKITEELLASDS
SQCAVCKDTFELNQEVKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYKQRTRGTSAPNQSQLGDSSTDGGNAGDSPLSSGENSQTQQMADRRVRRIAFPWPFG
GFGSAAETSNSGGGNNRGNDDEPRSRNRGSQNSSDPMQEDID

Sed0000730 (gene) of Chayote v1 genome