; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000738 (gene) of Chayote v1 genome

Gene IDSed0000738
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase RMA1H1-like
Genome locationLG14:23032667..23036912
RNA-Seq ExpressionSed0000738
SyntenySed0000738
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134706.1 E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus]4.9e-11280.48Show/hide
Query:  NLNFHDFSFSF-----FNWKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGR
        +L F D S +F       WKHVSGTE   RE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ+ASLAIDEHPQCPVCKADISHTTMVPLYGR
Subjt:  NLNFHDFSFSF-----FNWKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGR

Query:  GQMTEEVEPEAKLMHRDINIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFR
        GQ  EEVEPE K MH DINIPPRPSACGNQILA PSTH QQQLPYRNPYQRPNHDPL F NYEEDSA +PLLNL RTSFS FHHP++GMIGDFV++ VF 
Subjt:  GQMTEEVEPEAKLMHRDINIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFR

Query:  NSDNVYSYQNTYHPTGTGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        NSDN+YSY+N+Y  TG+ R+RLRRQEMQVDKSLNRISIFLF CV  CVL+F
Subjt:  NSDNVYSYQNTYHPTGTGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

XP_004134707.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus]3.8e-11284.55Show/hide
Query:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI
        WKHVSGTE   RE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ+ASLAIDEHPQCPVCKADISHTTMVPLYGRGQ  EEVEPE K MH DI
Subjt:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI

Query:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG
        NIPPRPSACGNQILA PSTH QQQLPYRNPYQRPNHDPL F NYEEDSA +PLLNL RTSFS FHHP++GMIGDFV++ VF NSDN+YSY+N+Y  TG+ 
Subjt:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG

Query:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        R+RLRRQEMQVDKSLNRISIFLF CV  CVL+F
Subjt:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

XP_008439861.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo]3.8e-11284.98Show/hide
Query:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI
        WKHVS   GTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ+ASLAIDEHPQCPVCKADISHTTMVPLYGRGQM EEVE EAK MHRDI
Subjt:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI

Query:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG
        NIPPRPSACGNQILA PSTH QQQLPYRNPYQRPNHDPL F NYEE SA +PLLNL RTSFS FHHP++GMIGDFV++ VF NSDN+YSY+N+Y  TG+ 
Subjt:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG

Query:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        R+RLRRQEMQVDKSLNRISIFLF CV  CVL+F
Subjt:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

XP_022142014.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia]1.6e-11080.85Show/hide
Query:  WK-HVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRD
        WK HVS T GTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ+ASLA DEHPQCPVCKADISHTTMVPLYGRGQ  EEVEPEAK +HRD
Subjt:  WK-HVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRD

Query:  INIPPRPSACGNQILANPS-THQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTG
        I+IPPRPSACGN +LA PS  HQQQQLPYRNPYQRPNHDPL F NYEEDS+ APLLNL RTSFS FHHP++GMIGD +Y+ VF NS+N+YSY+N+YH TG
Subjt:  INIPPRPSACGNQILANPS-THQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTG

Query:  TGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        +  +RLRRQEMQ  KSLNRISIFL  CV  CVL+F
Subjt:  TGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

XP_038881993.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]2.1e-11585.84Show/hide
Query:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI
        WKHVSGT GTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ+ASLAIDEHPQCPVCKADISHTTMVPLYGRGQ  EEVEPEAK MH DI
Subjt:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI

Query:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG
        NIPPRPSACGNQ+LA PS H QQQLPYRNPYQ+PNHDPL F NYEEDSA APLLNL RTSFSGFHHPL+GMIGDFV++ VF NSDN+YSY+N+Y  TG+ 
Subjt:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG

Query:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        R+RLRRQEMQVDKSLNRISIFLF CV  CVL+F
Subjt:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

TrEMBL top hitse value%identityAlignment
A0A0A0KK60 Rnf51.8e-11284.55Show/hide
Query:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI
        WKHVSGTE   RE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ+ASLAIDEHPQCPVCKADISHTTMVPLYGRGQ  EEVEPE K MH DI
Subjt:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI

Query:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG
        NIPPRPSACGNQILA PSTH QQQLPYRNPYQRPNHDPL F NYEEDSA +PLLNL RTSFS FHHP++GMIGDFV++ VF NSDN+YSY+N+Y  TG+ 
Subjt:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG

Query:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        R+RLRRQEMQVDKSLNRISIFLF CV  CVL+F
Subjt:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

A0A1S3AZB8 E3 ubiquitin-protein ligase RMA1H1-like1.8e-11284.98Show/hide
Query:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI
        WKHVS   GTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ+ASLAIDEHPQCPVCKADISHTTMVPLYGRGQM EEVE EAK MHRDI
Subjt:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI

Query:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG
        NIPPRPSACGNQILA PSTH QQQLPYRNPYQRPNHDPL F NYEE SA +PLLNL RTSFS FHHP++GMIGDFV++ VF NSDN+YSY+N+Y  TG+ 
Subjt:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG

Query:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        R+RLRRQEMQVDKSLNRISIFLF CV  CVL+F
Subjt:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

A0A5A7UGP7 E3 ubiquitin-protein ligase RMA1H1-like1.8e-11284.98Show/hide
Query:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI
        WKHVS   GTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ+ASLAIDEHPQCPVCKADISHTTMVPLYGRGQM EEVE EAK MHRDI
Subjt:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDI

Query:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG
        NIPPRPSACGNQILA PSTH QQQLPYRNPYQRPNHDPL F NYEE SA +PLLNL RTSFS FHHP++GMIGDFV++ VF NSDN+YSY+N+Y  TG+ 
Subjt:  NIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTG

Query:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        R+RLRRQEMQVDKSLNRISIFLF CV  CVL+F
Subjt:  RSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

A0A6J1CKD0 E3 ubiquitin-protein ligase RMA1H1-like7.7e-11180.85Show/hide
Query:  WK-HVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRD
        WK HVS T GTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQ+ASLA DEHPQCPVCKADISHTTMVPLYGRGQ  EEVEPEAK +HRD
Subjt:  WK-HVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRD

Query:  INIPPRPSACGNQILANPS-THQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTG
        I+IPPRPSACGN +LA PS  HQQQQLPYRNPYQRPNHDPL F NYEEDS+ APLLNL RTSFS FHHP++GMIGD +Y+ VF NS+N+YSY+N+YH TG
Subjt:  INIPPRPSACGNQILANPS-THQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTG

Query:  TGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        +  +RLRRQEMQ  KSLNRISIFL  CV  CVL+F
Subjt:  TGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

A0A6J1KVR4 E3 ubiquitin-protein ligase RMA1H1-like isoform X11.3e-11082.48Show/hide
Query:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRD-
        WKHVSGT GTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV++ SLAIDEHPQCPVCKADISHTTMVPLYGRGQM EEV PEA+ +H+D 
Subjt:  WKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRD-

Query:  INIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGT
        ++IPPRPSACGNQILA  STH QQQL YRNPYQRPNHDPL F NYEEDS  AP LNL RTSFSGFHHP++GMIGDF+Y+ VF NSDN+YSYQN+YH TG+
Subjt:  INIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGT

Query:  GRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
         R+RLRRQEMQ +KSLNRISIFLF CV  CVL+F
Subjt:  GRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

SwissProt top hitse value%identityAlignment
O64425 E3 ubiquitin-protein ligase RMA13.5e-3639.73Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLA--IDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSACGNQILAN
        FDCNICLD   EPVVTLCGHL+CWPCI+KWL VQ+ S +     H QCPVCK+ +SH+T+VPLYGRG+ T + E +  +  R +  P       N   A+
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLA--IDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSACGNQILAN

Query:  PSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF--RNSDNVYSYQNTYHPTGTGRSRLRRQEMQVDKS
              Q++ + +P              E    V+ +++    S+S    P++ M+G+ V + +F  R  D  ++Y +TY+  GT   R+RR+ MQ DKS
Subjt:  PSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF--RNSDNVYSYQNTYHPTGTGRSRLRRQEMQVDKS

Query:  LNRISIFLFFCVFFCVLIF
        L RI  F   CV  C+L+F
Subjt:  LNRISIFLFFCVFFCVLIF

P93030 E3 ubiquitin-protein ligase RMA21.4e-2432.02Show/hide
Query:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTAS-LAIDEH------PQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSAC
        G FDCNICLD   +PVVTLCGHL+CWPCI+KW +    S   +D++      P+CPVCK+D+S  T+VP+YGRGQ         K      N+P RP+  
Subjt:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTAS-LAIDEH------PQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSAC

Query:  GNQILA---NPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF-RNSDNVYSYQNTYHPTGTGRSRLR
           +          + Q+  YR P                                    P++G++ + VY  +F  +S N+  Y++          R R
Subjt:  GNQILA---NPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF-RNSDNVYSYQNTYHPTGTGRSRLR

Query:  RQEMQVDKSLNRISIFLFFCVFFCVLIF
        R+ MQ ++SL+R+ +FL   +F C+ +F
Subjt:  RQEMQVDKSLNRISIFLFFCVFFCVLIF

Q6R567 E3 ubiquitin-protein ligase RMA1H15.6e-4238.98Show/hide
Query:  ESLNLNFHDFSFSFFNWKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASL--AIDEHPQCPVCKADISHTTMVPLYGR
        E L+  F+        WK ++       E   G FDCNICLD  HEPV+TLCGHLYCWPCIYKW++ Q+ S   +  + PQCPVCKA++S  T++PLYGR
Subjt:  ESLNLNFHDFSFSFFNWKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASL--AIDEHPQCPVCKADISHTTMVPLYGR

Query:  GQMTEEVEPEAKLMHRDINIPPRPSA--CGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTV
        G  + +   E K  +  I IP RP +  CG   L   +     QL  R  YQ+ +    R   Y+     +P+L+    + +   H    MIG+  Y+ +
Subjt:  GQMTEEVEPEAKLMHRDINIPPRPSA--CGNQILANPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTV

Query:  FRNSD-NVYSYQNTYHPTGTGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
        F NS   +Y+Y N+Y+   +   R+RRQ  Q D+SL RI  FLF C   C+++F
Subjt:  FRNSD-NVYSYQNTYHPTGTGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

Q8GUK7 E3 ubiquitin-protein ligase RMA35.2e-4039.29Show/hide
Query:  HDFSFSFFNWKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHP-QCPVCKADISHTTMVPLYGRGQMTEEVE
        HD  F      +++      +    GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLHVQ +S+++D+H   CPVCK++I+ T++VPLYGRG  +    
Subjt:  HDFSFSFFNWKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHP-QCPVCKADISHTTMVPLYGRGQMTEEVE

Query:  PEAK---LMHRDINIPPRPSACGNQILA----NPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRN
          +K    +  DI   P PSA  N I +    NPS   Q   P  + +Q   + P  F   E         +L       F +P+IGM GD VY+ +F  
Subjt:  PEAK---LMHRDINIPPRPSACGNQILA----NPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRN

Query:  SDNVYS--YQNTYHPTGTGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
          N  +  YQ+             ++ MQ +KSLNR+SIF   C+  C+L+F
Subjt:  SDNVYS--YQNTYHPTGTGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

Q99942 E3 ubiquitin-protein ligase RNF52.3e-1944.86Show/hide
Query:  GTEGTDRET--YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIP
        G EG +RE       F+CNICL+ A E VV++CGHLYCWPC+++WL  +       E  +CPVCKA IS   +VPLYGRG    + +P  K   R     
Subjt:  GTEGTDRET--YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIP

Query:  PRPSACG
        P P + G
Subjt:  PRPSACG

Arabidopsis top hitse value%identityAlignment
AT3G58030.1 RING/U-box superfamily protein1.0e-2239.71Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSACGNQILANPS
        FDCNICLD + EPV+T CGHLYCWPC+Y+WL +  A        +CPVCK +++  T+ P+YGRG    E+E        D  +P RP A   + L N  
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSACGNQILANPS

Query:  THQQQQLPYRNPYQRPNHDPL-RFQN-YEEDSAVAP
                 R+P+  P  + + R QN ++ DS   P
Subjt:  THQQQQLPYRNPYQRPNHDPL-RFQN-YEEDSAVAP

AT4G03510.1 RING membrane-anchor 12.5e-3739.73Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLA--IDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSACGNQILAN
        FDCNICLD   EPVVTLCGHL+CWPCI+KWL VQ+ S +     H QCPVCK+ +SH+T+VPLYGRG+ T + E +  +  R +  P       N   A+
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLA--IDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSACGNQILAN

Query:  PSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF--RNSDNVYSYQNTYHPTGTGRSRLRRQEMQVDKS
              Q++ + +P              E    V+ +++    S+S    P++ M+G+ V + +F  R  D  ++Y +TY+  GT   R+RR+ MQ DKS
Subjt:  PSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF--RNSDNVYSYQNTYHPTGTGRSRLRRQEMQVDKS

Query:  LNRISIFLFFCVFFCVLIF
        L RI  F   CV  C+L+F
Subjt:  LNRISIFLFFCVFFCVLIF

AT4G03510.2 RING membrane-anchor 12.5e-3739.73Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLA--IDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSACGNQILAN
        FDCNICLD   EPVVTLCGHL+CWPCI+KWL VQ+ S +     H QCPVCK+ +SH+T+VPLYGRG+ T + E +  +  R +  P       N   A+
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLA--IDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSACGNQILAN

Query:  PSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF--RNSDNVYSYQNTYHPTGTGRSRLRRQEMQVDKS
              Q++ + +P              E    V+ +++    S+S    P++ M+G+ V + +F  R  D  ++Y +TY+  GT   R+RR+ MQ DKS
Subjt:  PSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF--RNSDNVYSYQNTYHPTGTGRSRLRRQEMQVDKS

Query:  LNRISIFLFFCVFFCVLIF
        L RI  F   CV  C+L+F
Subjt:  LNRISIFLFFCVFFCVLIF

AT4G27470.1 RING membrane-anchor 33.7e-4139.29Show/hide
Query:  HDFSFSFFNWKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHP-QCPVCKADISHTTMVPLYGRGQMTEEVE
        HD  F      +++      +    GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLHVQ +S+++D+H   CPVCK++I+ T++VPLYGRG  +    
Subjt:  HDFSFSFFNWKHVSGTEGTDRETYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHP-QCPVCKADISHTTMVPLYGRGQMTEEVE

Query:  PEAK---LMHRDINIPPRPSACGNQILA----NPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRN
          +K    +  DI   P PSA  N I +    NPS   Q   P  + +Q   + P  F   E         +L       F +P+IGM GD VY+ +F  
Subjt:  PEAK---LMHRDINIPPRPSACGNQILA----NPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRN

Query:  SDNVYS--YQNTYHPTGTGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF
          N  +  YQ+             ++ MQ +KSLNR+SIF   C+  C+L+F
Subjt:  SDNVYS--YQNTYHPTGTGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF

AT4G28270.1 RING membrane-anchor 29.8e-2632.02Show/hide
Query:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTAS-LAIDEH------PQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSAC
        G FDCNICLD   +PVVTLCGHL+CWPCI+KW +    S   +D++      P+CPVCK+D+S  T+VP+YGRGQ         K      N+P RP+  
Subjt:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQTAS-LAIDEH------PQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSAC

Query:  GNQILA---NPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF-RNSDNVYSYQNTYHPTGTGRSRLR
           +          + Q+  YR P                                    P++G++ + VY  +F  +S N+  Y++          R R
Subjt:  GNQILA---NPSTHQQQQLPYRNPYQRPNHDPLRFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVF-RNSDNVYSYQNTYHPTGTGRSRLR

Query:  RQEMQVDKSLNRISIFLFFCVFFCVLIF
        R+ MQ ++SL+R+ +FL   +F C+ +F
Subjt:  RQEMQVDKSLNRISIFLFFCVFFCVLIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAAGAAAACGGAGGTTCGTCAATAAAACCCCGTTCTCATAAGACGCTTGAAGCCGATCATTACCAACTGGCTTTTTTTTTCTTTTTTTTTTCCTCTGTTTTCTT
GTTCTATCTTTTTATTTTTTTATTTTTTTTATTTTTTTGTGGAAATATATTAGCAAACGAACAGCCGATTCTCTCAATTTCAGGTGAATCACTAAATTTAAACTTTCATG
ATTTTTCTTTTTCATTTTTCAATTGGAAACATGTCTCTGGTACAGAGGGAACTGATAGAGAAACCTACAAGGGTTGCTTTGATTGTAACATCTGCTTAGACTTTGCCCAT
GAGCCAGTGGTTACTCTCTGCGGCCACTTATACTGCTGGCCGTGTATCTACAAATGGCTACATGTCCAGACCGCGTCTCTTGCCATTGACGAGCACCCGCAATGCCCCGT
TTGCAAGGCTGATATCTCCCACACCACAATGGTTCCTCTCTATGGTCGTGGCCAAATGACCGAGGAAGTCGAGCCGGAAGCGAAACTAATGCATCGAGATATCAATATAC
CTCCTAGACCATCAGCTTGTGGTAACCAGATACTTGCTAATCCCAGCACACACCAACAACAACAGCTTCCATATCGAAACCCTTACCAGCGACCGAACCACGACCCGCTT
CGTTTTCAAAACTATGAAGAAGATTCAGCGGTTGCTCCTTTGCTGAACCTTACAAGAACATCATTCAGCGGTTTTCACCATCCGTTGATAGGAATGATTGGCGATTTCGT
GTATTCAACGGTTTTTCGGAACTCGGACAATGTATATTCTTACCAAAACACTTACCATCCAACAGGGACCGGTAGGAGCCGGTTGAGAAGACAGGAAATGCAGGTAGACA
AGTCATTGAACAGAATCTCCATTTTTCTCTTCTTTTGTGTGTTTTTTTGTGTTCTTATCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAAGAAAACGGAGGTTCGTCAATAAAACCCCGTTCTCATAAGACGCTTGAAGCCGATCATTACCAACTGGCTTTTTTTTTCTTTTTTTTTTCCTCTGTTTTCTT
GTTCTATCTTTTTATTTTTTTATTTTTTTTATTTTTTTGTGGAAATATATTAGCAAACGAACAGCCGATTCTCTCAATTTCAGGTGAATCACTAAATTTAAACTTTCATG
ATTTTTCTTTTTCATTTTTCAATTGGAAACATGTCTCTGGTACAGAGGGAACTGATAGAGAAACCTACAAGGGTTGCTTTGATTGTAACATCTGCTTAGACTTTGCCCAT
GAGCCAGTGGTTACTCTCTGCGGCCACTTATACTGCTGGCCGTGTATCTACAAATGGCTACATGTCCAGACCGCGTCTCTTGCCATTGACGAGCACCCGCAATGCCCCGT
TTGCAAGGCTGATATCTCCCACACCACAATGGTTCCTCTCTATGGTCGTGGCCAAATGACCGAGGAAGTCGAGCCGGAAGCGAAACTAATGCATCGAGATATCAATATAC
CTCCTAGACCATCAGCTTGTGGTAACCAGATACTTGCTAATCCCAGCACACACCAACAACAACAGCTTCCATATCGAAACCCTTACCAGCGACCGAACCACGACCCGCTT
CGTTTTCAAAACTATGAAGAAGATTCAGCGGTTGCTCCTTTGCTGAACCTTACAAGAACATCATTCAGCGGTTTTCACCATCCGTTGATAGGAATGATTGGCGATTTCGT
GTATTCAACGGTTTTTCGGAACTCGGACAATGTATATTCTTACCAAAACACTTACCATCCAACAGGGACCGGTAGGAGCCGGTTGAGAAGACAGGAAATGCAGGTAGACA
AGTCATTGAACAGAATCTCCATTTTTCTCTTCTTTTGTGTGTTTTTTTGTGTTCTTATCTTTTGA
Protein sequenceShow/hide protein sequence
MVKENGGSSIKPRSHKTLEADHYQLAFFFFFFSSVFLFYLFIFLFFLFFCGNILANEQPILSISGESLNLNFHDFSFSFFNWKHVSGTEGTDRETYKGCFDCNICLDFAH
EPVVTLCGHLYCWPCIYKWLHVQTASLAIDEHPQCPVCKADISHTTMVPLYGRGQMTEEVEPEAKLMHRDINIPPRPSACGNQILANPSTHQQQQLPYRNPYQRPNHDPL
RFQNYEEDSAVAPLLNLTRTSFSGFHHPLIGMIGDFVYSTVFRNSDNVYSYQNTYHPTGTGRSRLRRQEMQVDKSLNRISIFLFFCVFFCVLIF