; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000739 (gene) of Chayote v1 genome

Gene IDSed0000739
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG11:27381154..27381978
RNA-Seq ExpressionSed0000739
SyntenySed0000739
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020412.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-14992.7Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK ESIHIREVW+HN+EEEFAL+REIVDQFN+IAMDTEFPGVVVRPVGAFKNIN+YNYQ LKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+S DIFASDSIELLRQCGIDFQK+NEEGID N FGELLMSSGIVLN+NVYWVTFHSGYDFGYLLKLLTCRSLP TQA FFDLI++YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

XP_022132176.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]4.1e-14791.97Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK ESIHIREVW HNLEEEFAL+REIVDQFN+IAMDTEFPGVV+RPVGAFKNINEYNYQ LKDNVD LKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+SEDIFASDSIELLRQCGIDF+K+NEEGID NRF ELLMSSGIVLN+ V WVTFHSGYDFGYLLKLLTCRSLP TQAGFFDLI++YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ+ N
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

XP_022951690.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]3.4e-14992.7Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK ESIHIREVW+HN+EEEFAL+REIVDQFN+IAMDTEFPGVVVRPVGAFKNIN+YNYQ LKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+S DIFASDSIELLRQCGIDFQK+NEEGID N FGELLMSSGIVLN+NVYWVTFHSGYDFGYLLKLLTCRSLP TQA FFDLI++YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

XP_023538244.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo]9.8e-14992.34Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK ESIHIREVW+HN+EEEFAL+REIVD+FN+IAMDTEFPGVVVRPVGAFKNIN+YNYQ LKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+S DIFASDSIELLRQCGIDFQK+NEEGID N FGELLMSSGIVLN+NVYWVTFHSGYDFGYLLKLLTCRSLP TQA FFDLI++YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

XP_038886120.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]5.9e-14690.51Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK ESI+IREVW+HNLEEEFALIREIVDQFN+IAMDTEFPGVVVRPVG+FKNINEYNY+ LK+NVDTLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+ EDI+ASDSIELLR+CGIDF+K NEEGID NRF ELLMSSGIVLN+N+YWVTFHSGYDFGYLLKLLTCR+LP TQA FFDLIH+YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLM+FCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

TrEMBL top hitse value%identityAlignment
A0A0A0LSM4 Poly(A)-specific ribonuclease1.6e-14489.05Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK ESI+IREVW+ NLEEEFALIR+IVDQFN+IAMDTEFPGVVVRPVG+FKNINEYNY+ L++NVDTLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+ +DI+ASDSIELLR+CGIDFQK +EEGID NRFGELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTCR+LP TQA FFDLIH+YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLM+FCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

A0A6J1BRI8 Poly(A)-specific ribonuclease2.0e-14791.97Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK ESIHIREVW HNLEEEFAL+REIVDQFN+IAMDTEFPGVV+RPVGAFKNINEYNYQ LKDNVD LKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+SEDIFASDSIELLRQCGIDF+K+NEEGID NRF ELLMSSGIVLN+ V WVTFHSGYDFGYLLKLLTCRSLP TQAGFFDLI++YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ+ N
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

A0A6J1BVW9 Poly(A)-specific ribonuclease5.4e-14590.15Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK +SI IREVW+ NLEEEFALIREIVD+FN+IAMDTEFPGVV+RPVGAFKNIN+YNYQ LKDNVD LKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+SEDIFASDSIELLRQCGIDF+K+NEEGID NRFGELLMSSG+VLN+ V WVTFHSGYDFGYLLKLLTCR+LP TQAGFFDLI++YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAGVLYGLGVE+GQ TN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

A0A6J1GJJ8 Poly(A)-specific ribonuclease1.6e-14992.7Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK ESIHIREVW+HN+EEEFAL+REIVDQFN+IAMDTEFPGVVVRPVGAFKNIN+YNYQ LKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+S DIFASDSIELLRQCGIDFQK+NEEGID N FGELLMSSGIVLN+NVYWVTFHSGYDFGYLLKLLTCRSLP TQA FFDLI++YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

A0A6J1KLE0 Poly(A)-specific ribonuclease1.6e-14992.7Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MSILPK ESIHIREVW+HN+EEEFAL+REIVDQFN+IAMDTEFPGVVVRPVGAFKNIN+YNYQ LKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREFN+S DIFASDSIELLRQCGIDFQK+NEEGID N FGELLMSSGIVLN+NVYWVTFHSGYDFGYLLKLLTCRSLP TQA FFDLI++YFPMVYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 79.1e-8155.39Show/hide
Query:  SIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNL
        S  I EVW+ NL+EE   IR+++ ++N++AMDTEFPGVV RP+G F++  +Y YQ+L+ NVD LK+IQLGLTF +E G  P  GT     WQFNF+ FNL
Subjt:  SIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNL

Query:  SEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDIKHLMKFCN
        +ED++A DSIELL   GI F+KH EEGI+   F ELLM+SG+VL E V W++FHSGYDFGYL+K+LT  +LP  +  FF+++ ++FP++YD+K+LMK C 
Subjt:  SEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDIKHLMKFCN

Query:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLG-----VENG
        +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+ FF       KY G LYGLG     V+NG
Subjt:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLG-----VENG

Q9LEU4 Probable CCR4-associated factor 1 homolog 102.9e-11974.25Show/hide
Query:  KAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW +NL EEFALIREIVD+F++IAMDTEFPGVV++PV  FK  N+ NY+ LK+NVD LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFRE
Subjt:  KAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFRE

Query:  FNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDIKHLMK
        FN+ EDI+AS+SIELLRQCGIDF+K+ E+GID  RFGEL+MSSGIVLN+ + WVTFH GYDFGYL+KLLTC+ LP  QA FF L++VYFP VYDIKHLM 
Subjt:  FNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+G TT
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTT

Q9S9P2 Probable CCR4-associated factor 1 homolog 28.4e-9562.5Show/hide
Query:  ESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNIN------EYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQF
        ++I IREVW+HNLE+E ALI + +D F ++AMDTEFPG+V + V A  N N      EYNY  LK NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  ESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNIN------EYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQF

Query:  NFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDIK
        NFREFN+  D+FA DSIELLR+  ID +K+NE G+DA RF ELLM SG+VLN+ ++WVTFH GYDFGYLLKLL+ + LP   + FFD +  +FP+VYDIK
Subjt:  NFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDIK

Query:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL
        +LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS  KY+G L+GL
Subjt:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 65.3e-12174.54Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  LIR++VD F ++AMDTEFPG+VVRPVG FK+  +Y+Y+ LK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREF+L  DIFA DSIELL+Q GID  K+  +GID+ RF ELLMSSGIVLNENV+WVTFHSGYDFGYLLKLLTC++LP +Q  FF LI+VYFP VYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.0e-12477.21Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTD-KFCIW
        MS+  K +SI IREVW+ NLE E ALIRE+VD F F+AMDTEFPG+V RPVG FK   EY+Y+ LK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTD-KFCIW

Query:  QFNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYD
        QFNFREF+L  DI+A+DSIELLRQ GIDF K+NE GID+ RF ELLMSSGIVLNENV+WVTFHSGYDFGYLLKLLTC++LP TQ GFF++I VYFP VYD
Subjt:  QFNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVENGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.7e-12274.54Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  LIR++VD F ++AMDTEFPG+VVRPVG FK+  +Y+Y+ LK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREF+L  DIFA DSIELL+Q GID  K+  +GID+ RF ELLMSSGIVLNENV+WVTFHSGYDFGYLLKLLTC++LP +Q  FF LI+VYFP VYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.7e-12274.54Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  LIR++VD F ++AMDTEFPG+VVRPVG FK+  +Y+Y+ LK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREF+L  DIFA DSIELL+Q GID  K+  +GID+ RF ELLMSSGIVLNENV+WVTFHSGYDFGYLLKLLTC++LP +Q  FF LI+VYFP VYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.0e-12174.35Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  LIR++VD F ++AMDTEFPG+VVRPVG FK+  +Y+Y+ LK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQ

Query:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI
        FNFREF+L  DIFA DSIELL+Q GID  K+  +GID+ RF ELLMSSGIVLNENV+WVTFHSGYDFGYLLKLLTC++LP +Q  FF LI+VYFP VYDI
Subjt:  FNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVEN
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVEN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVEN

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.3e-12677.21Show/hide
Query:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTD-KFCIW
        MS+  K +SI IREVW+ NLE E ALIRE+VD F F+AMDTEFPG+V RPVG FK   EY+Y+ LK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTD-KFCIW

Query:  QFNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYD
        QFNFREF+L  DI+A+DSIELLRQ GIDF K+NE GID+ RF ELLMSSGIVLNENV+WVTFHSGYDFGYLLKLLTC++LP TQ GFF++I VYFP VYD
Subjt:  QFNFREFNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVENGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-12074.25Show/hide
Query:  KAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW +NL EEFALIREIVD+F++IAMDTEFPGVV++PV  FK  N+ NY+ LK+NVD LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFRE
Subjt:  KAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFRE

Query:  FNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDIKHLMK
        FN+ EDI+AS+SIELLRQCGIDF+K+ E+GID  RFGEL+MSSGIVLN+ + WVTFH GYDFGYL+KLLTC+ LP  QA FF L++VYFP VYDIKHLM 
Subjt:  FNLSEDIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+G TT
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTGCCGAAAGCTGAGTCCATTCATATCCGTGAGGTGTGGAGCCACAACTTGGAGGAAGAGTTCGCTCTAATTCGTGAAATTGTTGACCAATTTAACTTCAT
AGCCATGGATACGGAGTTTCCCGGCGTCGTGGTTCGCCCTGTCGGCGCCTTTAAGAATATCAATGAATATAACTACCAAATCCTCAAGGATAACGTCGACACCTTGAAGT
TGATTCAGTTGGGTCTTACGTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACGGATAAGTTCTGCATTTGGCAGTTCAATTTCCGGGAGTTCAACCTTAGTGAG
GATATTTTCGCTAGTGATTCGATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGCACAATGAGGAGGGTATTGATGCCAATCGGTTCGGCGAGCTTCTAATGTC
ATCTGGGATTGTGTTGAACGAGAATGTTTATTGGGTGACGTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCTTACCGGCGACGCAGG
CTGGATTTTTTGATTTGATCCATGTGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTGCATGGTGGGTTGAACAAGCTTGCAGAGTTG
TTAGAGGTGGAGAGGATTGGAGTCTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGATCTACACAGAA
ATACGCAGGTGTTTTATATGGTCTCGGTGTTGAAAATGGCCAGACTACTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTGCCGAAAGCTGAGTCCATTCATATCCGTGAGGTGTGGAGCCACAACTTGGAGGAAGAGTTCGCTCTAATTCGTGAAATTGTTGACCAATTTAACTTCAT
AGCCATGGATACGGAGTTTCCCGGCGTCGTGGTTCGCCCTGTCGGCGCCTTTAAGAATATCAATGAATATAACTACCAAATCCTCAAGGATAACGTCGACACCTTGAAGT
TGATTCAGTTGGGTCTTACGTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACGGATAAGTTCTGCATTTGGCAGTTCAATTTCCGGGAGTTCAACCTTAGTGAG
GATATTTTCGCTAGTGATTCGATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGCACAATGAGGAGGGTATTGATGCCAATCGGTTCGGCGAGCTTCTAATGTC
ATCTGGGATTGTGTTGAACGAGAATGTTTATTGGGTGACGTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCTTACCGGCGACGCAGG
CTGGATTTTTTGATTTGATCCATGTGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTGCATGGTGGGTTGAACAAGCTTGCAGAGTTG
TTAGAGGTGGAGAGGATTGGAGTCTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGATCTACACAGAA
ATACGCAGGTGTTTTATATGGTCTCGGTGTTGAAAATGGCCAGACTACTAATTGA
Protein sequenceShow/hide protein sequence
MSILPKAESIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQILKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNLSE
DIFASDSIELLRQCGIDFQKHNEEGIDANRFGELLMSSGIVLNENVYWVTFHSGYDFGYLLKLLTCRSLPATQAGFFDLIHVYFPMVYDIKHLMKFCNSLHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQTTN