; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000744 (gene) of Chayote v1 genome

Gene IDSed0000744
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L44
Genome locationLG05:25425249..25426157
RNA-Seq ExpressionSed0000744
SyntenySed0000744
Gene Ontology termsNA
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052773.1 60S ribosomal protein L44 [Cucumis melo var. makuwa]6.2e-3143.59Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSATV------PCHDDACFSPELKKPPPWPPMNSTTPVVRAQIT----
        MA+SS+K  PSK PF FL  CF SS K+  +K      R+RR  SL FRFKKSSATV      P HD+  FSP+ KKPPP   +    P V  +I     
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSATV------PCHDDACFSPELKKPPPWPPMNSTTPVVRAQIT----

Query:  -ESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV----------------------AALATIQPETFYGRKPAASAS--------QPVIVIVAMAI
         ESLKPSQTRKK EST+ + T ++  P R+  A L SV                      AA+AT  P    G KP    +          VI++V +AI
Subjt:  -ESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV----------------------AALATIQPETFYGRKPAASAS--------QPVIVIVAMAI

Query:  LVLWGRVCATLCTAALFYISRL----LEPGGGGG
        +VLWGR+CA LCT ALFY+ R     +E GGGGG
Subjt:  LVLWGRVCATLCTAALFYISRL----LEPGGGGG

KAG6606901.1 60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]8.9e-4652.23Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSA-----------TVPCHDDACFSPELKKPPPWPPMNSTTPVVRAQI
        MAE+SEK+SPSKRP HFLL CFGSSPKVQ +K P  GR D R PS RFRFKKSSA           TVPC D A FSPE KKPPP P + S  P VR +I
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSA-----------TVPCHDDACFSPELKKPPPWPPMNSTTPVVRAQI

Query:  TESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV--------------------AALATIQPETFYGRKPA--ASASQP------VIVIVAMAILV
         E +KPSQT KKTESTR DS      PA+R  ALL S+                    +A+ T  P +   RKPA  A  + P      +IVIVA+AI+V
Subjt:  TESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV--------------------AALATIQPETFYGRKPA--ASASQP------VIVIVAMAILV

Query:  LWGRVCATLCTAALFYISRLLE---PGGGGGERRVWNRDGRSGYGKI
        LWG++CA LCT ALFY  R L       GGGE RV NR G SG+GK+
Subjt:  LWGRVCATLCTAALFYISRLLE---PGGGGGERRVWNRDGRSGYGKI

KGN58547.1 hypothetical protein Csa_002056 [Cucumis sativus]7.6e-2942.49Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSATV------PCHDDACFSPELKKPPPWPPMNSTTPVVRAQIT--ES
        MA+SSE I PSK P HFL  CF SS K+  +K      R RR  S  FRFKKSSATV      P HD+  F PE KK PP   +    P V  +I    S
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSATV------PCHDDACFSPELKKPPPWPPMNSTTPVVRAQIT--ES

Query:  LKPSQTRKKTESTRPDSTAERFPPARRATALLPSV----------------------AALATIQPETFYGRKPAASAS--------QPVIVIVAMAILVL
        LKPSQTRKK  ST+ + T ++  P R+  ALL SV                      AA+AT  P    G KP               VI++V +AI++L
Subjt:  LKPSQTRKKTESTRPDSTAERFPPARRATALLPSV----------------------AALATIQPETFYGRKPAASAS--------QPVIVIVAMAILVL

Query:  WGRVCATLCTAALFYISRL----LEPGGGGGER
        WGR+CA LCT ALFY+ R     +EP GGG  R
Subjt:  WGRVCATLCTAALFYISRL----LEPGGGGGER

XP_022949237.1 uncharacterized protein LOC111452650 [Cucurbita moschata]9.9e-4551.21Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSA-----------TVPCHDDACFSPELKKPPPWPPMNSTTPVVRAQI
        MAE+SEK+SPSKRP HFLL CFGSSPKVQ +K P  GRRD R PS RFRFKKSSA           TVPC D A FSPE KKPPP P + S  P VR +I
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSA-----------TVPCHDDACFSPELKKPPPWPPMNSTTPVVRAQI

Query:  TESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV--------------------AALATIQPETFYGRKPA--------ASASQPVIVIVAMAILV
         E +KPSQ  KKTESTR D       PA+R  ALL S+                    +A+ T  P +   RKPA        A     +IVIVA+AI+V
Subjt:  TESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV--------------------AALATIQPETFYGRKPA--------ASASQPVIVIVAMAILV

Query:  LWGRVCATLCTAALFYISRLLEPG---GGGGERRVWNRDGRSGYGKIS
        LWG++CA LCT ALFY  R L       GGGE RV NR G SG+ K+S
Subjt:  LWGRVCATLCTAALFYISRLLEPG---GGGGERRVWNRDGRSGYGKIS

XP_022982640.1 uncharacterized protein LOC111481455 [Cucurbita maxima]2.1e-2642.42Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSAT------VPCHDDACFSPELKKPPPWPPMNSTTPVVRAQITESLK
        MAESS+     K   HFL  CF SSP VQ QK       +RR PSLRFRFKK SAT      VPCHD+  FSPE   PPP  P+     ++     +++K
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSAT------VPCHDDACFSPELKKPPPWPPMNSTTPVVRAQITESLK

Query:  PSQTRKKTESTRPDSTAERFPPARRATALLPS-----------VAALATIQPETFYGRKPA--ASASQPVI------VIVAMAILVLWGRVCATLCTAAL
         S+TRKK+EST+ + T E+ PPA++ +  L S             A+A   P T      +  A  + P I      VIVA+AI+VLWGR+CA LCTAAL
Subjt:  PSQTRKKTESTRPDSTAERFPPARRATALLPS-----------VAALATIQPETFYGRKPA--ASASQPVI------VIVAMAILVLWGRVCATLCTAAL

Query:  FYISRLLEPGGGGGERRVWNRDGRSGYGKIS
        FY+ R L       E  V   DG   +GK+S
Subjt:  FYISRLLEPGGGGGERRVWNRDGRSGYGKIS

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ2 Uncharacterized protein3.7e-2942.49Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSATV------PCHDDACFSPELKKPPPWPPMNSTTPVVRAQIT--ES
        MA+SSE I PSK P HFL  CF SS K+  +K      R RR  S  FRFKKSSATV      P HD+  F PE KK PP   +    P V  +I    S
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSATV------PCHDDACFSPELKKPPPWPPMNSTTPVVRAQIT--ES

Query:  LKPSQTRKKTESTRPDSTAERFPPARRATALLPSV----------------------AALATIQPETFYGRKPAASAS--------QPVIVIVAMAILVL
        LKPSQTRKK  ST+ + T ++  P R+  ALL SV                      AA+AT  P    G KP               VI++V +AI++L
Subjt:  LKPSQTRKKTESTRPDSTAERFPPARRATALLPSV----------------------AALATIQPETFYGRKPAASAS--------QPVIVIVAMAILVL

Query:  WGRVCATLCTAALFYISRL----LEPGGGGGER
        WGR+CA LCT ALFY+ R     +EP GGG  R
Subjt:  WGRVCATLCTAALFYISRL----LEPGGGGGER

A0A5A7UA28 60S ribosomal protein L443.0e-3143.59Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSATV------PCHDDACFSPELKKPPPWPPMNSTTPVVRAQIT----
        MA+SS+K  PSK PF FL  CF SS K+  +K      R+RR  SL FRFKKSSATV      P HD+  FSP+ KKPPP   +    P V  +I     
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSATV------PCHDDACFSPELKKPPPWPPMNSTTPVVRAQIT----

Query:  -ESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV----------------------AALATIQPETFYGRKPAASAS--------QPVIVIVAMAI
         ESLKPSQTRKK EST+ + T ++  P R+  A L SV                      AA+AT  P    G KP    +          VI++V +AI
Subjt:  -ESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV----------------------AALATIQPETFYGRKPAASAS--------QPVIVIVAMAI

Query:  LVLWGRVCATLCTAALFYISRL----LEPGGGGG
        +VLWGR+CA LCT ALFY+ R     +E GGGGG
Subjt:  LVLWGRVCATLCTAALFYISRL----LEPGGGGG

A0A6J1F3C2 uncharacterized protein LOC1114417601.7e-2645.93Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSAT------VPCHDDACFSPELKKPPPWPPMNSTTPVVRAQITESLK
        MAESS+     K   HFL  CF SSP VQ QK  P    +RR PSLRFRFKKSSAT      VPCHD+   SPE   PPP PP+     +V +   +++K
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSAT------VPCHDDACFSPELKKPPPWPPMNSTTPVVRAQITESLK

Query:  PSQTRK---------KTESTRPDSTAERFPP--------ARRATALLP-SVAALATIQPETFYGRKPAASASQP---VIVIVAMAILVLWGRVCATLCTA
        PS+TRK         K+EST+ +STAE+            +++ + LP + AAL T  P +   + P  S ++    VIVIVA+AI+VLWGR+CA LCTA
Subjt:  PSQTRK---------KTESTRPDSTAERFPP--------ARRATALLP-SVAALATIQPETFYGRKPAASASQP---VIVIVAMAILVLWGRVCATLCTA

Query:  ALFYISRLL
        ALFY+ R L
Subjt:  ALFYISRLL

A0A6J1GBH7 uncharacterized protein LOC1114526504.8e-4551.21Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSA-----------TVPCHDDACFSPELKKPPPWPPMNSTTPVVRAQI
        MAE+SEK+SPSKRP HFLL CFGSSPKVQ +K P  GRRD R PS RFRFKKSSA           TVPC D A FSPE KKPPP P + S  P VR +I
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSA-----------TVPCHDDACFSPELKKPPPWPPMNSTTPVVRAQI

Query:  TESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV--------------------AALATIQPETFYGRKPA--------ASASQPVIVIVAMAILV
         E +KPSQ  KKTESTR D       PA+R  ALL S+                    +A+ T  P +   RKPA        A     +IVIVA+AI+V
Subjt:  TESLKPSQTRKKTESTRPDSTAERFPPARRATALLPSV--------------------AALATIQPETFYGRKPA--------ASASQPVIVIVAMAILV

Query:  LWGRVCATLCTAALFYISRLLEPG---GGGGERRVWNRDGRSGYGKIS
        LWG++CA LCT ALFY  R L       GGGE RV NR G SG+ K+S
Subjt:  LWGRVCATLCTAALFYISRLLEPG---GGGGERRVWNRDGRSGYGKIS

A0A6J1IZW6 uncharacterized protein LOC1114814551.0e-2642.42Show/hide
Query:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSAT------VPCHDDACFSPELKKPPPWPPMNSTTPVVRAQITESLK
        MAESS+     K   HFL  CF SSP VQ QK       +RR PSLRFRFKK SAT      VPCHD+  FSPE   PPP  P+     ++     +++K
Subjt:  MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSAT------VPCHDDACFSPELKKPPPWPPMNSTTPVVRAQITESLK

Query:  PSQTRKKTESTRPDSTAERFPPARRATALLPS-----------VAALATIQPETFYGRKPA--ASASQPVI------VIVAMAILVLWGRVCATLCTAAL
         S+TRKK+EST+ + T E+ PPA++ +  L S             A+A   P T      +  A  + P I      VIVA+AI+VLWGR+CA LCTAAL
Subjt:  PSQTRKKTESTRPDSTAERFPPARRATALLPS-----------VAALATIQPETFYGRKPA--ASASQPVI------VIVAMAILVLWGRVCATLCTAAL

Query:  FYISRLLEPGGGGGERRVWNRDGRSGYGKIS
        FY+ R L       E  V   DG   +GK+S
Subjt:  FYISRLLEPGGGGGERRVWNRDGRSGYGKIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCTTCTGAAAAAATCTCTCCCTCCAAACGCCCATTCCATTTTCTCCTCTGTTGCTTTGGATCTTCCCCCAAAGTTCAAAACCAAAAGAAACCGCCCAACGG
CCGACGGGACCGCCGCGCTCCGTCGCTTCGATTCCGGTTCAAGAAATCCTCTGCAACCGTTCCATGCCACGATGATGCCTGTTTTTCGCCGGAGCTCAAAAAACCGCCGC
CGTGGCCGCCCATGAACTCCACAACTCCGGTAGTCCGAGCCCAGATCACTGAGTCGTTAAAGCCGAGTCAAACTCGGAAGAAAACTGAGTCAACTCGGCCCGATTCCACG
GCGGAGAGATTCCCACCGGCGAGAAGAGCCACCGCGTTGTTGCCCTCCGTCGCCGCCTTGGCAACCATCCAGCCGGAGACCTTCTATGGGCGGAAACCGGCTGCGTCGGC
GAGTCAACCGGTGATTGTGATTGTTGCGATGGCGATTTTGGTACTGTGGGGGCGAGTGTGCGCGACACTGTGCACGGCGGCGCTGTTCTACATAAGCCGCCTGTTGGAAC
CGGGTGGCGGCGGCGGCGAGAGGCGGGTTTGGAACCGAGATGGAAGAAGCGGGTATGGGAAGATTTCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAATTTCAGCTCCAAAATCCAAATGCCGATCTATTATTCCCATGGCGGAATCTTCTGAAAAAATCTCTCCCTCCAAACGCCCATTCCATTTTCTCCTCTGTTGCTTTG
GATCTTCCCCCAAAGTTCAAAACCAAAAGAAACCGCCCAACGGCCGACGGGACCGCCGCGCTCCGTCGCTTCGATTCCGGTTCAAGAAATCCTCTGCAACCGTTCCATGC
CACGATGATGCCTGTTTTTCGCCGGAGCTCAAAAAACCGCCGCCGTGGCCGCCCATGAACTCCACAACTCCGGTAGTCCGAGCCCAGATCACTGAGTCGTTAAAGCCGAG
TCAAACTCGGAAGAAAACTGAGTCAACTCGGCCCGATTCCACGGCGGAGAGATTCCCACCGGCGAGAAGAGCCACCGCGTTGTTGCCCTCCGTCGCCGCCTTGGCAACCA
TCCAGCCGGAGACCTTCTATGGGCGGAAACCGGCTGCGTCGGCGAGTCAACCGGTGATTGTGATTGTTGCGATGGCGATTTTGGTACTGTGGGGGCGAGTGTGCGCGACA
CTGTGCACGGCGGCGCTGTTCTACATAAGCCGCCTGTTGGAACCGGGTGGCGGCGGCGGCGAGAGGCGGGTTTGGAACCGAGATGGAAGAAGCGGGTATGGGAAGATTTC
TTGAGAGGTTTGATTAGGCGCGAAGTATGTTGGTGAATTCGGTTTACGGGAAACCGCCATGTGAGGGAGCTTGAAGAATATTTTAATGGCGGAGAAGTGACAACACTAAA
TTTTGTAAATTAATGGCTACTGCTAAAGAGTTTTTTTTTGTTTCTCTGTTTTTAGAATTAGTTGTAAAGAGCTCCAACATTGTTAAACTAATAATTTGACTCATTGGCGG
ATAAAATAAATAAATGGTTCGAAAACAAA
Protein sequenceShow/hide protein sequence
MAESSEKISPSKRPFHFLLCCFGSSPKVQNQKKPPNGRRDRRAPSLRFRFKKSSATVPCHDDACFSPELKKPPPWPPMNSTTPVVRAQITESLKPSQTRKKTESTRPDST
AERFPPARRATALLPSVAALATIQPETFYGRKPAASASQPVIVIVAMAILVLWGRVCATLCTAALFYISRLLEPGGGGGERRVWNRDGRSGYGKIS