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Sed0000749 (gene) of Chayote v1 genome

Gene IDSed0000749
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein, group 3-like
Genome locationLG01:15871240..15871753
RNA-Seq ExpressionSed0000749
SyntenySed0000749
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573277.1 hypothetical protein SDJN03_27164, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2052.74Show/hide
Query:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA
        S+ +SR++FTTS +K   +GHG DANRDPRPDLAYEDAKE AKE    MKE+AKD AE       E TN+ AETARAAKEKVKDYA DA+EKAKEGTNR 
Subjt:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA

Query:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR
        AET      +     +  + K       G    TE+V    ++ +R
Subjt:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR

KAG7012442.1 hypothetical protein SDJN02_25194, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-2052.74Show/hide
Query:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA
        S+ +SR++FTTS +K   +GHG DANRDPRPDLAYEDAKE AKE    MKE+AKD AE       E TN+ AETARAAKEKVKDYA DA+EKAKEGTNR 
Subjt:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA

Query:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR
        AET      +     +  + K       G    TE+V    ++ +R
Subjt:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR

XP_022954521.1 late embryogenesis abundant protein, group 3 isoform X1 [Cucurbita moschata]3.7e-2052.74Show/hide
Query:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA
        S+ +SR++FTTS +K   +GHG DANRDPRPDLAYEDAKE AKE    MKE+AKD AE       E TN+ AETARAAKEKVKDYA DA+EKAKEGTNR 
Subjt:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA

Query:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR
        AET      +     +  + K       G    TE+V    ++ +R
Subjt:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR

XP_022954522.1 late embryogenesis abundant protein, group 3 isoform X2 [Cucurbita moschata]3.7e-2052.74Show/hide
Query:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA
        S+ +SR++FTTS +K   +GHG DANRDPRPDLAYEDAKE AKE    MKE+AKD AE       E TN+ AETARAAKEKVKDYA DA+EKAKEGTNR 
Subjt:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA

Query:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR
        AET      +     +  + K       G    TE+V    ++ +R
Subjt:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR

XP_022994469.1 late embryogenesis abundant protein, group 3-like [Cucurbita maxima]3.9e-2252.87Show/hide
Query:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYED----AKEGAKEMKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA
        ST +SR++FTTS +K   +GHGVDANRDPRPDLAYED    AKEGA++MKE+AKD AE       E TN+ AETARAAKEKVKDYA DAKEKAKEGTNR 
Subjt:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYED----AKEGAKEMKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA

Query:  AETGRGCKGKDGRDGEEGEAKCGRGMG------GGEGHDTESVMVANQEQQRRKVVD
        AET          D  E   +  +GM         EG    +  V N  ++ +K V+
Subjt:  AETGRGCKGKDGRDGEEGEAKCGRGMG------GGEGHDTESVMVANQEQQRRKVVD

TrEMBL top hitse value%identityAlignment
A0A0A0LRY0 Uncharacterized protein1.1e-1753.33Show/hide
Query:  STNMSRLAFTTSTNKH-NTDGHGVDANRDPRPDLAYED---------------AKEGAKEMKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYD
        ST +S L+F+TS +KH + DG+GVDANRD  PD AYED               AKEGAKEMKE+AKD ++       E TN+ +ETA AAKEKVKDYA D
Subjt:  STNMSRLAFTTSTNKH-NTDGHGVDANRDPRPDLAYED---------------AKEGAKEMKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYD

Query:  AKEKAKEGTNRAAETGRGC--KGKDGRDGEEGEAK
        AKEKAKEGTNRA ET      + K+G  G + + K
Subjt:  AKEKAKEGTNRAAETGRGC--KGKDGRDGEEGEAK

A0A6J1CFT8 late embryogenesis abundant protein, group 39.1e-1747.22Show/hide
Query:  MSSSTNMSRLAFTTSTNKHNTDGHGVDANRD-------PRPDLAYEDAKEGAKE----MKERA-------KDVAEEGTNRVAETARAAKEKVKDYAYDAK
        + SST +SR++F TS +KH    +G +AN D       PRPDLAYEDAKE  KE    MKE+A       KD AEE +NR AETARAAKEKVKDYA+DAK
Subjt:  MSSSTNMSRLAFTTSTNKHNTDGHGVDANRD-------PRPDLAYEDAKEGAKE----MKERA-------KDVAEEGTNRVAETARAAKEKVKDYAYDAK

Query:  EKAKEGTNRAAETG--------RGCKG-KDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQRRKVVDETGVRTNFDD
        EKAKEGT RAAET            KG K+  +   G AK G    G +   T        +   +K+ D T + TN DD
Subjt:  EKAKEGTNRAAETG--------RGCKG-KDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQRRKVVDETGVRTNFDD

A0A6J1GR50 late embryogenesis abundant protein, group 3 isoform X11.8e-2052.74Show/hide
Query:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA
        S+ +SR++FTTS +K   +GHG DANRDPRPDLAYEDAKE AKE    MKE+AKD AE       E TN+ AETARAAKEKVKDYA DA+EKAKEGTNR 
Subjt:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA

Query:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR
        AET      +     +  + K       G    TE+V    ++ +R
Subjt:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR

A0A6J1GR73 late embryogenesis abundant protein, group 3 isoform X21.8e-2052.74Show/hide
Query:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA
        S+ +SR++FTTS +K   +GHG DANRDPRPDLAYEDAKE AKE    MKE+AKD AE       E TN+ AETARAAKEKVKDYA DA+EKAKEGTNR 
Subjt:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKE----MKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA

Query:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR
        AET      +     +  + K       G    TE+V    ++ +R
Subjt:  AETGRGCKGKDGRDGEEGEAKCGRGMGGGEGHDTESVMVANQEQQR

A0A6J1K2X8 late embryogenesis abundant protein, group 3-like1.9e-2252.87Show/hide
Query:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYED----AKEGAKEMKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA
        ST +SR++FTTS +K   +GHGVDANRDPRPDLAYED    AKEGA++MKE+AKD AE       E TN+ AETARAAKEKVKDYA DAKEKAKEGTNR 
Subjt:  STNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYED----AKEGAKEMKERAKDVAE-------EGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRA

Query:  AETGRGCKGKDGRDGEEGEAKCGRGMG------GGEGHDTESVMVANQEQQRRKVVD
        AET          D  E   +  +GM         EG    +  V N  ++ +K V+
Subjt:  AETGRGCKGKDGRDGEEGEAKCGRGMG------GGEGHDTESVMVANQEQQRRKVVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G44310.1 Late embryogenesis abundant protein (LEA) family protein6.7e-0438.38Show/hide
Query:  RDPRPDLAYEDAKEGAKEMKERAKDVAEEGTNRVAETARAAKEKVKDYAYDAKEKAK-----------EGTNRAAETGRGCKGKDGRDGEEGEAKCGRG
        ++   D AY D KE  K+  E AKD   EG +R A+ A   KEK KD AYD KEK K           EG +RAA+     K K     E+ + K   G
Subjt:  RDPRPDLAYEDAKEGAKEMKERAKDVAEEGTNRVAETARAAKEKVKDYAYDAKEKAK-----------EGTNRAAETGRGCKGKDGRDGEEGEAKCGRG

AT5G44310.2 Late embryogenesis abundant protein (LEA) family protein6.7e-0438.38Show/hide
Query:  RDPRPDLAYEDAKEGAKEMKERAKDVAEEGTNRVAETARAAKEKVKDYAYDAKEKAK-----------EGTNRAAETGRGCKGKDGRDGEEGEAKCGRG
        ++   D AY D KE  K+  E AKD   EG +R A+ A   KEK KD AYD KEK K           EG +RAA+     K K     E+ + K   G
Subjt:  RDPRPDLAYEDAKEGAKEMKERAKDVAEEGTNRVAETARAAKEKVKDYAYDAKEKAK-----------EGTNRAAETGRGCKGKDGRDGEEGEAKCGRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCTTCAACCAACATGTCCAGGCTCGCTTTCACTACTTCCACCAACAAACATAATACGGATGGACATGGCGTGGATGCAAACAGAGACCCAAGACCAGACTTGGC
ATACGAAGATGCAAAGGAAGGAGCCAAAGAAATGAAGGAGAGAGCAAAAGACGTGGCGGAGGAAGGAACGAATAGAGTTGCGGAGACCGCGCGGGCTGCGAAGGAGAAGG
TTAAAGACTACGCCTACGACGCCAAGGAGAAGGCCAAGGAAGGAACGAACCGTGCTGCGGAGACTGGCAGAGGATGCAAAGGAAAAGACGGAAGAGATGGCGAAGAAGGG
GAAGCAAAGTGTGGAAGGGGCATGGGAGGCGGCGAAGGGCACGACACAGAGAGTGTAATGGTGGCTAATCAGGAACAACAGAGAAGGAAGGTGGTGGATGAAACTGGTGT
CAGGACAAACTTTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCTTCAACCAACATGTCCAGGCTCGCTTTCACTACTTCCACCAACAAACATAATACGGATGGACATGGCGTGGATGCAAACAGAGACCCAAGACCAGACTTGGC
ATACGAAGATGCAAAGGAAGGAGCCAAAGAAATGAAGGAGAGAGCAAAAGACGTGGCGGAGGAAGGAACGAATAGAGTTGCGGAGACCGCGCGGGCTGCGAAGGAGAAGG
TTAAAGACTACGCCTACGACGCCAAGGAGAAGGCCAAGGAAGGAACGAACCGTGCTGCGGAGACTGGCAGAGGATGCAAAGGAAAAGACGGAAGAGATGGCGAAGAAGGG
GAAGCAAAGTGTGGAAGGGGCATGGGAGGCGGCGAAGGGCACGACACAGAGAGTGTAATGGTGGCTAATCAGGAACAACAGAGAAGGAAGGTGGTGGATGAAACTGGTGT
CAGGACAAACTTTGATGATTGA
Protein sequenceShow/hide protein sequence
MSSSTNMSRLAFTTSTNKHNTDGHGVDANRDPRPDLAYEDAKEGAKEMKERAKDVAEEGTNRVAETARAAKEKVKDYAYDAKEKAKEGTNRAAETGRGCKGKDGRDGEEG
EAKCGRGMGGGEGHDTESVMVANQEQQRRKVVDETGVRTNFDD