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Sed0000767 (gene) of Chayote v1 genome

Gene IDSed0000767
OrganismSechium edule (Chayote v1)
DescriptionSmall polypeptide ROTUNDIFOLIA LIKE 3
Genome locationLG04:11429273..11429473
RNA-Seq ExpressionSed0000767
SyntenySed0000767
Gene Ontology termsGO:0008285 - negative regulation of cell population proliferation (biological process)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsIPR012552 - DVL


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOX90732.1 ROTUNDIFOLIA like 6, putative [Theobroma cacao]7.6e-0750Show/hide
Query:  MGQCQSKKGNSSEE--------MERSEADKF-GCMEMIKESKSRFYIARRCLIMLICWHKYG
        MGQC S+   +  E        +  SE+++  GC+ M+KE +SRFYIARRCL+ML+CWHKYG
Subjt:  MGQCQSKKGNSSEE--------MERSEADKF-GCMEMIKESKSRFYIARRCLIMLICWHKYG

KAG2243374.1 hypothetical protein Bca52824_094794 [Brassica carinata]4.5e-0750.77Show/hide
Query:  MGQCQS-----------KKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN
        MGQC S            KG   E  ERS     GC+ M+KE +SRFYIARRC++ML+CWHKY N
Subjt:  MGQCQS-----------KKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN

THU73428.1 hypothetical protein C4D60_Mb04t22740 [Musa balbisiana]2.0e-0751.72Show/hide
Query:  MGQCQSK-----KGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYG
        MGQC S+     +G    E E + +DK GC+ + KE +SRFYI RRC++ML+CWHKYG
Subjt:  MGQCQSK-----KGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYG

XP_021274878.1 uncharacterized protein LOC110409752 [Herrania umbratica]5.8e-0750Show/hide
Query:  MGQCQSKKGNSSEE--------MERSEADKF-GCMEMIKESKSRFYIARRCLIMLICWHKYG
        MGQC S+   +  E        +  SE+++  GC+ M+KE +SRFYIARRCL+ML+CWHKYG
Subjt:  MGQCQSKKGNSSEE--------MERSEADKF-GCMEMIKESKSRFYIARRCLIMLICWHKYG

XP_024005666.1 uncharacterized protein LOC112082279 [Eutrema salsugineum]6.9e-0851.56Show/hide
Query:  MGQCQS----------KKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN
        MGQC S          ++G  SE MER++    GC+ M+KE +SRFYIARRC++ML+CWHKY N
Subjt:  MGQCQS----------KKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN

TrEMBL top hitse value%identityAlignment
A0A061DFK8 ROTUNDIFOLIA like 6, putative3.7e-0750Show/hide
Query:  MGQCQSKKGNSSEE--------MERSEADKF-GCMEMIKESKSRFYIARRCLIMLICWHKYG
        MGQC S+   +  E        +  SE+++  GC+ M+KE +SRFYIARRCL+ML+CWHKYG
Subjt:  MGQCQSKKGNSSEE--------MERSEADKF-GCMEMIKESKSRFYIARRCLIMLICWHKYG

A0A3P6AIW3 Uncharacterized protein3.7e-0750Show/hide
Query:  MGQCQSK----------KGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN
        MGQC S           +G   E M+RS     GC+ M+KE +SRFYIARRC++ML+CWHKY N
Subjt:  MGQCQSK----------KGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN

A0A4S8KE72 Uncharacterized protein9.7e-0851.72Show/hide
Query:  MGQCQSK-----KGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYG
        MGQC S+     +G    E E + +DK GC+ + KE +SRFYI RRC++ML+CWHKYG
Subjt:  MGQCQSK-----KGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYG

A0A6J0ZJ08 uncharacterized protein LOC1104097522.8e-0750Show/hide
Query:  MGQCQSKKGNSSEE--------MERSEADKF-GCMEMIKESKSRFYIARRCLIMLICWHKYG
        MGQC S+   +  E        +  SE+++  GC+ M+KE +SRFYIARRCL+ML+CWHKYG
Subjt:  MGQCQSKKGNSSEE--------MERSEADKF-GCMEMIKESKSRFYIARRCLIMLICWHKYG

M0RWD6 Uncharacterized protein9.7e-0851.72Show/hide
Query:  MGQCQSK-----KGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYG
        MGQC S+     +G    E E + +DK GC+ + KE +SRFYI RRC++ML+CWHKYG
Subjt:  MGQCQSK-----KGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYG

SwissProt top hitse value%identityAlignment
B8A9X1 Small polypeptide ROTUNDIFOLIA LIKE 32.8e-0440Show/hide
Query:  QCQSKKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKY
        Q Q ++ N+S+ + +       C+E +KE ++RFYI RRC+ ML+CW  Y
Subjt:  QCQSKKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKY

Q6IM84 Small polypeptide DEVIL 171.7e-0952.46Show/hide
Query:  MGQCQS-----KKGNSSEE--MERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN
        MGQC S     +K    EE   E  E    GC+ M+KE +SRFYIARRC++ML+CWHKY N
Subjt:  MGQCQS-----KKGNSSEE--MERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN

Q6IM86 Small polypeptide DEVIL 159.7e-0545.83Show/hide
Query:  SKKGNSSEEMERSEADKFG-CMEMIKESKSRFYIARRCLIMLICWHKY
        SK  + S  + +  A   G C ++ KE KSRFYI +RC++ML+CWHK+
Subjt:  SKKGNSSEEMERSEADKFG-CMEMIKESKSRFYIARRCLIMLICWHKY

Q8L7D0 Small polypeptide DEVIL 131.3e-0445.83Show/hide
Query:  KKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN
        K+  SS     S   K+    + KE K+RFYI RRC+ ML+CWHK+G+
Subjt:  KKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN

Q8LE84 Small polypeptide DEVIL 182.6e-0564.29Show/hide
Query:  CMEMIKESKSRFYIARRCLIMLICWHKY
        C  M KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKESKSRFYIARRCLIMLICWHKY

Arabidopsis top hitse value%identityAlignment
AT2G29125.1 ROTUNDIFOLIA like 29.0e-0645.83Show/hide
Query:  KKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN
        K+  SS     S   K+    + KE K+RFYI RRC+ ML+CWHK+G+
Subjt:  KKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN

AT3G46613.1 ROTUNDIFOLIA like 46.9e-0645.83Show/hide
Query:  SKKGNSSEEMERSEADKFG-CMEMIKESKSRFYIARRCLIMLICWHKY
        SK  + S  + +  A   G C ++ KE KSRFYI +RC++ML+CWHK+
Subjt:  SKKGNSSEEMERSEADKFG-CMEMIKESKSRFYIARRCLIMLICWHKY

AT3G55515.1 ROTUNDIFOLIA like 72.0e-0545.24Show/hide
Query:  RSEADKFG----CMEMIKESKSRFYIARRCLIMLICWHKYGN
        R +  K+G    C  ++KE ++RFYI RRC++MLICW  + N
Subjt:  RSEADKFG----CMEMIKESKSRFYIARRCLIMLICWHKYGN

AT4G35783.1 ROTUNDIFOLIA like 61.2e-1052.46Show/hide
Query:  MGQCQS-----KKGNSSEE--MERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN
        MGQC S     +K    EE   E  E    GC+ M+KE +SRFYIARRC++ML+CWHKY N
Subjt:  MGQCQS-----KKGNSSEE--MERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGN

AT5G59510.1 ROTUNDIFOLIA like 51.8e-0664.29Show/hide
Query:  CMEMIKESKSRFYIARRCLIMLICWHKY
        C  M KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKESKSRFYIARRCLIMLICWHKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAGTGTCAATCAAAAAAAGGGAACAGCAGCGAAGAGATGGAAAGATCAGAAGCAGACAAGTTTGGATGTATGGAGATGATCAAAGAGAGCAAGTCCAGGTTCTA
TATAGCAAGGAGATGTCTCATCATGCTCATCTGCTGGCATAAATATGGTAACAAAACACAACTACAAACTAACAAATATTTTATAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAGTGTCAATCAAAAAAAGGGAACAGCAGCGAAGAGATGGAAAGATCAGAAGCAGACAAGTTTGGATGTATGGAGATGATCAAAGAGAGCAAGTCCAGGTTCTA
TATAGCAAGGAGATGTCTCATCATGCTCATCTGCTGGCATAAATATGGTAACAAAACACAACTACAAACTAACAAATATTTTATAAGCTAA
Protein sequenceShow/hide protein sequence
MGQCQSKKGNSSEEMERSEADKFGCMEMIKESKSRFYIARRCLIMLICWHKYGNKTQLQTNKYFIS