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Sed0000784 (gene) of Chayote v1 genome

Gene IDSed0000784
OrganismSechium edule (Chayote v1)
DescriptionPatatin
Genome locationLG14:22378980..22379785
RNA-Seq ExpressionSed0000784
SyntenySed0000784
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594656.1 hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4177.78Show/hide
Query:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK
        M A+ PLAIGTRGT+GSLV KEIEYF KLELER GGS+R+SG+A +    KTSFW++SL+WKWKKRRTN+GILPNICSAVELSKSNRFNGIPGF YRILK
Subjt:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK

Query:  DDLNHFPI
        +D+ HFPI
Subjt:  DDLNHFPI

XP_022926407.1 uncharacterized protein LOC111433571 [Cucurbita moschata]3.0e-4278.7Show/hide
Query:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK
        M A+ PLAIGTRGT+GSLV KEIEYF KLELER GGS+R+SG+A +    KTSFW++SL+WKWKKRRTN+GILPNICSAVELSKSNRFNGIPGF YRILK
Subjt:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK

Query:  DDLNHFPI
        DD+ HFPI
Subjt:  DDLNHFPI

XP_023003961.1 uncharacterized protein LOC111497407 [Cucurbita maxima]5.2e-4277.78Show/hide
Query:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK
        M A+ PLAIGTRGT+GSLV KEIEYF KLELER GGS+R+SG+A +    +TSFW++SL+WKWKKRRTN+GILPNICSAVELSKSNRFNGIPGF YRILK
Subjt:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK

Query:  DDLNHFPI
        DD+ HFPI
Subjt:  DDLNHFPI

XP_023518155.1 uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo]3.0e-4278.7Show/hide
Query:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK
        M A+ PLAIGTRGT+GSLV KEIEYF KLELER GGS+R+SG+A +    KTSFW++SL+WKWKKRRTN+GILPNICSAVELSKSNRFNGIPGF YRILK
Subjt:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK

Query:  DDLNHFPI
        DD+ HFPI
Subjt:  DDLNHFPI

XP_023544018.1 uncharacterized protein LOC111803725 [Cucurbita pepo subsp. pepo]2.9e-3775.93Show/hide
Query:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK
        MD I PLAIGTRGTVGSLV KEIEYF K E+ER G S+RISG+A +    K SFW+VSLTWKWKKR+ N+GILPNICSAVELSKSNRFNGIPGF+YRILK
Subjt:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK

Query:  DDLNHFPI
         D   FPI
Subjt:  DDLNHFPI

TrEMBL top hitse value%identityAlignment
A0A0A0KL84 Uncharacterized protein2.5e-3472.64Show/hide
Query:  AIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACKKT----SFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILKDD
        A+ PLAIGTRGTVGSLV KEIEYF KLELER G S  ISG A +++    SFW++SLTWKWKKR+ N+G+LPNI SAVE SKSNRFNGIPGF YRILKDD
Subjt:  AIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACKKT----SFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILKDD

Query:  LNHFPI
           FPI
Subjt:  LNHFPI

A0A6J1CKN5 uncharacterized protein LOC1110124774.1e-3772.73Show/hide
Query:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRR--TNHGILPNICSAVELSKSNRFNGIPGFAYRI
        M ++ PLAIGTRGTVGSLV KEIEYF KLELER GGS+RI+ EA +    K SFW++S TWKWKKRR  + +GILPNICSAVELSKSNRFNGIPGF YRI
Subjt:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRR--TNHGILPNICSAVELSKSNRFNGIPGFAYRI

Query:  LKDDLNHFPI
        LK+D+N+F I
Subjt:  LKDDLNHFPI

A0A6J1EEE9 uncharacterized protein LOC1114335711.5e-4278.7Show/hide
Query:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK
        M A+ PLAIGTRGT+GSLV KEIEYF KLELER GGS+R+SG+A +    KTSFW++SL+WKWKKRRTN+GILPNICSAVELSKSNRFNGIPGF YRILK
Subjt:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK

Query:  DDLNHFPI
        DD+ HFPI
Subjt:  DDLNHFPI

A0A6J1IJL8 uncharacterized protein LOC1114776861.4e-3775.93Show/hide
Query:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK
        MD I PLAIGTRGTVGSLV KEIEYF K E+ER G S+RISG+A +    K SFW+VSLTWKWKKR+ N+GILPNICSAVELSKSNRFNGIPGF+YRILK
Subjt:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK

Query:  DDLNHFPI
         D   FPI
Subjt:  DDLNHFPI

A0A6J1KQQ8 uncharacterized protein LOC1114974072.5e-4277.78Show/hide
Query:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK
        M A+ PLAIGTRGT+GSLV KEIEYF KLELER GGS+R+SG+A +    +TSFW++SL+WKWKKRRTN+GILPNICSAVELSKSNRFNGIPGF YRILK
Subjt:  MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACK----KTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILK

Query:  DDLNHFPI
        DD+ HFPI
Subjt:  DDLNHFPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein3.0e-1643.52Show/hide
Query:  PLAIGTRGTVGSLVKKEIEYFAKLEL------ERRGGSE------RISGEACKKTSFWVVSLTWKWKKRRTNHG---ILPNICSAVELSKSNRFNGIPGF
        P+AIGTRGT+GSLV+KEI+YF            RRG SE      +    +  +   W     W+ KKR+T  G     P++CSAVE+S  NR   +PGF
Subjt:  PLAIGTRGTVGSLVKKEIEYFAKLEL------ERRGGSE------RISGEACKKTSFWVVSLTWKWKKRRTNHG---ILPNICSAVELSKSNRFNGIPGF

Query:  AYRILKDD
         YRILK D
Subjt:  AYRILKDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCATTGTTCCACTTGCAATTGGCACGAGAGGAACTGTCGGGTCGCTGGTTAAGAAGGAGATCGAGTACTTCGCCAAGCTCGAGCTCGAACGCCGTGGTGGCTC
GGAGAGGATAAGTGGAGAAGCTTGCAAGAAGACAAGCTTTTGGGTTGTGTCATTGACATGGAAGTGGAAGAAGAGAAGAACCAACCATGGGATTCTGCCTAACATTTGCT
CTGCTGTTGAACTCTCAAAGAGCAATCGGTTTAATGGGATTCCTGGTTTTGCTTACAGGATTCTCAAAGATGATCTCAATCACTTTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
CTCAAAAGTCCTCGAGAAAAGGGTCCTGTAAAGGCTGTGAAAGCAATGCCACTTTCACTTTCTTTTAGAGTAAAATGTATAAAGGGATGAGCACAAGCAGTAGCTTTCTG
TGAGAGAAATGGATGCCATTGTTCCACTTGCAATTGGCACGAGAGGAACTGTCGGGTCGCTGGTTAAGAAGGAGATCGAGTACTTCGCCAAGCTCGAGCTCGAACGCCGT
GGTGGCTCGGAGAGGATAAGTGGAGAAGCTTGCAAGAAGACAAGCTTTTGGGTTGTGTCATTGACATGGAAGTGGAAGAAGAGAAGAACCAACCATGGGATTCTGCCTAA
CATTTGCTCTGCTGTTGAACTCTCAAAGAGCAATCGGTTTAATGGGATTCCTGGTTTTGCTTACAGGATTCTCAAAGATGATCTCAATCACTTTCCCATTTGATTTCAGC
TTCCATGTTCATATGGATCTTGTTTGCTTTTTGTGGAATTGCTTTTCCTTGGTCTGTTTGTATTTTGTTTCAAGGTTTGCAATGTTTTGACTGGCAAAAGCAAGAGTTTT
GTTGCTGATTTGATTGAAACAGACACTGTTCAAAACAAGATTGTATGTGAAACTATCATCAATTGACGTTTCTTTTTTTGGTTCTTAATTCCAAGAGTGAGATTGAGGGC
AGTCATGCTTTTGCCAAGGAGATTTCGAGTAAAGTGATAGTTGATTCGTCTAATGTTGTTCACTTTGAGTATAAACGTTACTAACTTTCGTTTCTGTTTCACTCTAAGGG
TGTGTTTGGGCCCCCGTTTATGTAAACGGCCGAGTT
Protein sequenceShow/hide protein sequence
MDAIVPLAIGTRGTVGSLVKKEIEYFAKLELERRGGSERISGEACKKTSFWVVSLTWKWKKRRTNHGILPNICSAVELSKSNRFNGIPGFAYRILKDDLNHFPI