; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000812 (gene) of Chayote v1 genome

Gene IDSed0000812
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG05:44432464..44433494
RNA-Seq ExpressionSed0000812
SyntenySed0000812
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604930.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-9263.49Show/hide
Query:  IREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILF
        IREVWA N+ HEI  LD+CL  Y ++SIDTEFPG I+ TPWG+ID++LY D RFNV +TK+IQLG+T  DELGN+GG WEFNFSDFD E DAHNP+SI F
Subjt:  IREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILF

Query:  LKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERL
        LKQNG DF K+K  GI +  F   F+  L+K+ I+RWITFHGLYDIGYL+ AMG V+  PE + EF  +VA +VG VRDLKHMARFCEGLE G +GLE+L
Subjt:  LKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERL

Query:  GELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQ
        G+L+ QKRFG+KHHAGSDSL+ A +H KM++ Y   + ICDG+LYG+S + +
Subjt:  GELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQ

KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]8.3e-9863.16Show/hide
Query:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD
        MG  NRAR RR    I+EVWASN  HEI  L++CLQ   ILSIDTEFPG IRSTPWGSID+++YEDLRFNV +TKLIQLGLTA DE G V G WEFNFSD
Subjt:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD

Query:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR
        FD + D  NPSSI FL+QNG DF K+K +GIPLS FT +F R+++++++ +W+TFHGLYDIGYL++AMG   E PE MEEFA MVA  VG+VRDLK +AR
Subjt:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR

Query:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQFKYIMFGTLMFSQMSSSI
        +CEGLE GR+GLERLGEL+ +KRFGMKHHAGSDSLL A +H KM   + +ES   DG+LYG+  +++   +   T+MF Q+S S+
Subjt:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQFKYIMFGTLMFSQMSSSI

XP_022146113.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]8.5e-9559.79Show/hide
Query:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD
        MG G R  SRRG   IREVW+ N   E++ L+ CL  Y IL+IDTEFPGFIRSTPWG+I+++LY+D RFNV +TKLIQLGLTA DE+GN+G  WEFNFSD
Subjt:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD

Query:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR
        FD + D HN SS+ FLKQNG DF+K+K  GIP++ FT+    + +K++I RW+TFHGLYDIGYLL+AMG   E PE MEEFA +V   +G V DLKHMA+
Subjt:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR

Query:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQFKYIMFGTLMFSQM
        FCEGLEDG++GLE+L +LM QKRFG KHHAGSDSLL A ++ KM   + + S +CDG+LYG+  ++  K  ++  LMF Q+
Subjt:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQFKYIMFGTLMFSQM

XP_022947867.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]9.1e-9764.93Show/hide
Query:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD
        MG  NR R RR    I+EVWASN  HEI  L++CLQ   ILSIDTEFPG IRSTPWGSID+++YEDLRFNV +TKLIQLGLTA DE G V G WEFNFSD
Subjt:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD

Query:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR
        FD + D  NPSSI FL+QNG DF K+K +GIPLS FT +F R+++++++ +W+TFHGLYDIGYL++AMG   E PE MEEFA MVA  VG+VRDLK +AR
Subjt:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR

Query:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQF
        +CEGLE GR+GLERLGEL+ +KRFGMKHHAGSDSLL A +H KM   + +ES   DG+LYG+  ++Q+
Subjt:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQF

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]1.3e-9560.69Show/hide
Query:  GGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFD
        G NR R    K  I +VWASN   EIS+L++CL+ + I+SIDTEFPGFIR++PWGSID+ LYED RFNV +TKLIQLGLTA D+ G +GG WEFNFSDFD
Subjt:  GGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFD

Query:  SEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMARFC
         E DA +PSS  FL+QNG DF K+K  GIP++ FT  FV +++K+ + RW+TFHGLYDIGYL++AMG  E  PE MEEFA +V  ++GIVRDLKHMARFC
Subjt:  SEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMARFC

Query:  EGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQFKYI---MF--GTLMFSQMSSSIPL
        EGLEDG++GLERLG+L+ QKR+G+KH+AGSDSLL A  H +MI+ + M++ ICDGYLYG S ++Q   I   MF    + F Q+  +IPL
Subjt:  EGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQFKYI---MF--GTLMFSQMSSSIPL

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease1.6e-9161.19Show/hide
Query:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD
        MGG N+ RS R K  IR+VWASN   EI+  D+CL+ + IL+IDTEFPGFI  +P GSID +LY+D  FNV +TKLIQLG+TA D+LG +GG WEFNFSD
Subjt:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD

Query:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMAR
        FD E DAH+P +I FL+ NG D +KMK  GIP+++FT  F+ +L+K  I RW+TFHGLYDIGYL++AMG +   P+ MEEFA +V N+VGIVRDLKHMA+
Subjt:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMAR

Query:  FCEGLED-GRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQ
        FCEGL+D GR+GLERLG+L+  KRFGMKH+AGSDSLL A  H +M+E + M S +C+G+LYG S  ++
Subjt:  FCEGLED-GRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQ

A0A5A7TRG1 Poly(A)-specific ribonuclease1.4e-9058.58Show/hide
Query:  MGGGNRARSRRGKL-WIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFS
        MGG N+ RSRR K  +IR+VWASN   EI++ D+CL+ + IL+IDTEFPGFI  +P  SID+++Y++ RFNV + KLIQLG+TA ++ G +GG WEFNFS
Subjt:  MGGGNRARSRRGKL-WIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFS

Query:  DFDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMA
        DFD + D+H+PS+I FL++NG DF+K+K  GIP+++FT  F+ +++K  I RW+TFHGLYDIGYL++AMG +   P+ MEEFA +V N+VGIVRDLKHMA
Subjt:  DFDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMA

Query:  RFCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQ
        RFCEGLEDGR+GLERLG+++ +KRFGMKH+AGSDSLL A  H +M++ + M   +C+G+LYG S  ++
Subjt:  RFCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQ

A0A6J1CXP9 Poly(A)-specific ribonuclease4.1e-9559.79Show/hide
Query:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD
        MG G R  SRRG   IREVW+ N   E++ L+ CL  Y IL+IDTEFPGFIRSTPWG+I+++LY+D RFNV +TKLIQLGLTA DE+GN+G  WEFNFSD
Subjt:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD

Query:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR
        FD + D HN SS+ FLKQNG DF+K+K  GIP++ FT+    + +K++I RW+TFHGLYDIGYLL+AMG   E PE MEEFA +V   +G V DLKHMA+
Subjt:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR

Query:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQFKYIMFGTLMFSQM
        FCEGLEDG++GLE+L +LM QKRFG KHHAGSDSLL A ++ KM   + + S +CDG+LYG+  ++  K  ++  LMF Q+
Subjt:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQFKYIMFGTLMFSQM

A0A6J1G7L2 Poly(A)-specific ribonuclease4.4e-9764.93Show/hide
Query:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD
        MG  NR R RR    I+EVWASN  HEI  L++CLQ   ILSIDTEFPG IRSTPWGSID+++YEDLRFNV +TKLIQLGLTA DE G V G WEFNFSD
Subjt:  MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSD

Query:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR
        FD + D  NPSSI FL+QNG DF K+K +GIPLS FT +F R+++++++ +W+TFHGLYDIGYL++AMG   E PE MEEFA MVA  VG+VRDLK +AR
Subjt:  FDSEFDAHNPSSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFV-EFPELMEEFAGMVANKVGIVRDLKHMAR

Query:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQF
        +CEGLE GR+GLERLGEL+ +KRFGMKHHAGSDSLL A +H KM   + +ES   DG+LYG+  ++Q+
Subjt:  FCEGLEDGRIGLERLGELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQF

A0A6J1G7T4 Poly(A)-specific ribonuclease4.7e-9162.7Show/hide
Query:  IREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILF
        IREVWA N+ HEI  LD+CL  Y I+SIDTEFPG I+ TPWG+ D++LY D RFNV +TK+IQLG+T  DE GN+GG WEFNFSDFD E DAHNP+SI F
Subjt:  IREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILF

Query:  LKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERL
        LKQNG DF K+K  GI +  F   F+  L K+ I+RW+TFHGLYDIGYL+ AMG V+  PE + EF  +VA +VG VRDLKHMARFCEGLE G +GLE+L
Subjt:  LKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVE-FPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERL

Query:  GELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQ
        G+L+ QKRFG+KHHAGSDSL+ A +H KM++ Y   + ICDG+LYG+S + +
Subjt:  GELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQ

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 51.1e-4441.92Show/hide
Query:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK
        EVW  N + E++ +  CL+H   ++IDTEFPG ++ TP  + D+  Y D++FNV  T LIQLGLT   +   +   WE N SDF+      N  SI FLK
Subjt:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK

Query:  QNGHDFEKMKTKGIPLSTFTTDFVRVL-KKNKIHRWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLERLG
         NG D +K++ +GI +  F  +F ++L +K+   RW+TF G YD  YLL+ +     PE  +EF   V   +G  V D+K MA  C GL   R GL+R+ 
Subjt:  QNGHDFEKMKTKGIPLSTFTTDFVRVL-KKNKIHRWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLERLG

Query:  ELMQQKRFGMKHHAGSDSLLCACIHTKMI
        +++Q +R G  HHAGSDS L A + TK+I
Subjt:  ELMQQKRFGMKHHAGSDSLLCACIHTKMI

Q9C6M9 Putative CCR4-associated factor 1 homolog 43.0e-4241.48Show/hide
Query:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK
        EVW  N   E+  +  CL+H+  ++IDTEFPG ++ TP  + ++  Y D++FNV  T LIQLG T  D  G +   WE N SDF+      N  SI FLK
Subjt:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK

Query:  QNGHDFEKMKTKGIPLSTFTTDFVRVLK-KNKIHRWITFHGLYDIGYLLQAM-GFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLERL
         NG + +K+  +GI +  F  DF ++LK K+    W+ F G YD  YL++ + G    PE  EEF   V   +G  V D+K +A  C GL   R GL+R+
Subjt:  QNGHDFEKMKTKGIPLSTFTTDFVRVLK-KNKIHRWITFHGLYDIGYLLQAM-GFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLERL

Query:  GELMQQKRFGMKHHAGSDSLLCACIHTKM
         +++Q KR G  HHAGSDS L A + TK+
Subjt:  GELMQQKRFGMKHHAGSDSLLCACIHTKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 81.4e-4443.05Show/hide
Query:  ISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLKQNGHDFEKMK
        +S ++ CL+ YR ++IDTEFP  +R T   + D++ Y D+ F+V + KLIQLGLT  D  G +GG WE NFSDF  + DA N  SI FL++NG D  K++
Subjt:  ISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLKQNGHDFEKMK

Query:  TKGIPLSTFTTDFVRVLKKNKIH-RWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERLGELMQQKRFGMK
         +GI +  F ++   +LKK + +  W+TFHG YDI YLL+       P   E F+  VA  +G V DLK MA  CEGL   R+GLE L       R G  
Subjt:  TKGIPLSTFTTDFVRVLKKNKIH-RWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERLGELMQQKRFGMK

Query:  HHAGSDSLLCACIHTKMIELYAM
        HHAGS++ L A +  K++  + +
Subjt:  HHAGSDSLLCACIHTKMIELYAM

Q9SFX6 Putative CCR4-associated factor 1 homolog 31.1e-4141.74Show/hide
Query:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK
        EVW  N   E++ +  CL+H   ++IDTEFPG ++ TP  + ++  Y D++FNV  T LIQLG T  D  G     WE N SDFD      N  SI FLK
Subjt:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK

Query:  QNGHDFEKMKTKGIPLSTFTTDFVRVL--KKNKIHRWITFHGLYDIGYLLQAM-GFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLER
         NG + +K++ +GI +  F  DF ++L  K  KI  W+ F G YD  YL++ + G    PE  EEF   V   +G  V D+K +A  C GL   + GL+R
Subjt:  QNGHDFEKMKTKGIPLSTFTTDFVRVL--KKNKIHRWITFHGLYDIGYLLQAM-GFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLER

Query:  LGELMQQKRFGMKHHAGSDSLLCACIHTKM
        + +++Q KR G  HHAGSDS L A + TK+
Subjt:  LGELMQQKRFGMKHHAGSDSLLCACIHTKM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.7e-4538.46Show/hide
Query:  REVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFL
        R VW SN+  E++ + +CL+ + +++ DTE+PG I  T + S   + Y  ++ NV  TKLIQ G T  +  G +GG+WE NFS+F    D  N  SI FL
Subjt:  REVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFL

Query:  KQNGHDFEKMKTKGIPL--STFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERL
        +++G D +K++ +G+ +    F    + V +  K   ++TF G YD  Y L  +   + PE   EFA  V    G V D K MA FCEGL +  +GL +L
Subjt:  KQNGHDFEKMKTKGIPL--STFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERL

Query:  GELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGI
         +L+Q  R G  HHAGSDSL+ A +  K+  +Y  +S    G +YGI
Subjt:  GELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGI

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-4638.46Show/hide
Query:  REVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFL
        R VW SN+  E++ + +CL+ + +++ DTE+PG I  T + S   + Y  ++ NV  TKLIQ G T  +  G +GG+WE NFS+F    D  N  SI FL
Subjt:  REVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFL

Query:  KQNGHDFEKMKTKGIPL--STFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERL
        +++G D +K++ +G+ +    F    + V +  K   ++TF G YD  Y L  +   + PE   EFA  V    G V D K MA FCEGL +  +GL +L
Subjt:  KQNGHDFEKMKTKGIPL--STFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERL

Query:  GELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGI
         +L+Q  R G  HHAGSDSL+ A +  K+  +Y  +S    G +YGI
Subjt:  GELMQQKRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGI

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.1e-4341.74Show/hide
Query:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK
        EVW  N   E++ +  CL+H   ++IDTEFPG ++ TP  + ++  Y D++FNV  T LIQLG T  D  G     WE N SDFD      N  SI FLK
Subjt:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK

Query:  QNGHDFEKMKTKGIPLSTFTTDFVRVL--KKNKIHRWITFHGLYDIGYLLQAM-GFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLER
         NG + +K++ +GI +  F  DF ++L  K  KI  W+ F G YD  YL++ + G    PE  EEF   V   +G  V D+K +A  C GL   + GL+R
Subjt:  QNGHDFEKMKTKGIPLSTFTTDFVRVL--KKNKIHRWITFHGLYDIGYLLQAM-GFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLER

Query:  LGELMQQKRFGMKHHAGSDSLLCACIHTKM
        + +++Q KR G  HHAGSDS L A + TK+
Subjt:  LGELMQQKRFGMKHHAGSDSLLCACIHTKM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-4341.48Show/hide
Query:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK
        EVW  N   E+  +  CL+H+  ++IDTEFPG ++ TP  + ++  Y D++FNV  T LIQLG T  D  G +   WE N SDF+      N  SI FLK
Subjt:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK

Query:  QNGHDFEKMKTKGIPLSTFTTDFVRVLK-KNKIHRWITFHGLYDIGYLLQAM-GFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLERL
         NG + +K+  +GI +  F  DF ++LK K+    W+ F G YD  YL++ + G    PE  EEF   V   +G  V D+K +A  C GL   R GL+R+
Subjt:  QNGHDFEKMKTKGIPLSTFTTDFVRVLK-KNKIHRWITFHGLYDIGYLLQAM-GFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLERL

Query:  GELMQQKRFGMKHHAGSDSLLCACIHTKM
         +++Q KR G  HHAGSDS L A + TK+
Subjt:  GELMQQKRFGMKHHAGSDSLLCACIHTKM

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.8e-4641.92Show/hide
Query:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK
        EVW  N + E++ +  CL+H   ++IDTEFPG ++ TP  + D+  Y D++FNV  T LIQLGLT   +   +   WE N SDF+      N  SI FLK
Subjt:  EVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLK

Query:  QNGHDFEKMKTKGIPLSTFTTDFVRVL-KKNKIHRWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLERLG
         NG D +K++ +GI +  F  +F ++L +K+   RW+TF G YD  YLL+ +     PE  +EF   V   +G  V D+K MA  C GL   R GL+R+ 
Subjt:  QNGHDFEKMKTKGIPLSTFTTDFVRVL-KKNKIHRWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVG-IVRDLKHMARFCEGLEDGRIGLERLG

Query:  ELMQQKRFGMKHHAGSDSLLCACIHTKMI
        +++Q +R G  HHAGSDS L A + TK+I
Subjt:  ELMQQKRFGMKHHAGSDSLLCACIHTKMI

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.0e-4543.05Show/hide
Query:  ISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLKQNGHDFEKMK
        +S ++ CL+ YR ++IDTEFP  +R T   + D++ Y D+ F+V + KLIQLGLT  D  G +GG WE NFSDF  + DA N  SI FL++NG D  K++
Subjt:  ISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNPSSILFLKQNGHDFEKMK

Query:  TKGIPLSTFTTDFVRVLKKNKIH-RWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERLGELMQQKRFGMK
         +GI +  F ++   +LKK + +  W+TFHG YDI YLL+       P   E F+  VA  +G V DLK MA  CEGL   R+GLE L       R G  
Subjt:  TKGIPLSTFTTDFVRVLKKNKIH-RWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERLGELMQQKRFGMK

Query:  HHAGSDSLLCACIHTKMIELYAM
        HHAGS++ L A +  K++  + +
Subjt:  HHAGSDSLLCACIHTKMIELYAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAGGAAATCGAGCTCGTTCGAGAAGAGGAAAGCTTTGGATTCGAGAAGTTTGGGCTTCGAATATCCGTCACGAAATCTCCGAACTCGATCAATGTCTTCAACA
TTACAGAATTCTGTCCATCGACACCGAATTCCCCGGATTTATTAGGAGCACTCCGTGGGGCTCAATCGACCAACAACTCTACGAAGATCTTCGATTCAATGTGACTAAAA
CCAAGTTGATCCAACTGGGATTAACCGCTTTGGATGAATTAGGGAATGTCGGCGGCATATGGGAGTTCAACTTCTCCGATTTCGACTCGGAGTTCGACGCACACAATCCT
TCGTCGATTTTGTTCCTCAAACAGAACGGACACGACTTCGAAAAGATGAAGACAAAAGGTATCCCATTGAGCACATTCACTACCGATTTTGTTCGTGTATTGAAAAAGAA
TAAGATCCATAGATGGATCACATTCCACGGATTATATGATATCGGGTATCTGTTGCAAGCGATGGGGTTCGTGGAGTTTCCGGAATTGATGGAAGAATTTGCTGGGATGG
TTGCGAACAAGGTCGGGATTGTGAGGGACTTGAAGCACATGGCTCGATTCTGCGAAGGGTTGGAGGATGGGAGGATTGGGCTAGAGAGATTGGGGGAATTGATGCAACAA
AAAAGGTTTGGAATGAAACACCATGCTGGTTCAGATAGCTTGTTGTGTGCTTGTATTCATACAAAGATGATTGAATTGTATGCTATGGAATCAAGTATTTGTGATGGGTA
TTTGTATGGAATCTCAACTAGAATTCAGTTCAAGTATATAATGTTTGGAACCCTTATGTTTAGTCAAATGTCATCATCAATTCCACTTAGTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGAGGAAATCGAGCTCGTTCGAGAAGAGGAAAGCTTTGGATTCGAGAAGTTTGGGCTTCGAATATCCGTCACGAAATCTCCGAACTCGATCAATGTCTTCAACA
TTACAGAATTCTGTCCATCGACACCGAATTCCCCGGATTTATTAGGAGCACTCCGTGGGGCTCAATCGACCAACAACTCTACGAAGATCTTCGATTCAATGTGACTAAAA
CCAAGTTGATCCAACTGGGATTAACCGCTTTGGATGAATTAGGGAATGTCGGCGGCATATGGGAGTTCAACTTCTCCGATTTCGACTCGGAGTTCGACGCACACAATCCT
TCGTCGATTTTGTTCCTCAAACAGAACGGACACGACTTCGAAAAGATGAAGACAAAAGGTATCCCATTGAGCACATTCACTACCGATTTTGTTCGTGTATTGAAAAAGAA
TAAGATCCATAGATGGATCACATTCCACGGATTATATGATATCGGGTATCTGTTGCAAGCGATGGGGTTCGTGGAGTTTCCGGAATTGATGGAAGAATTTGCTGGGATGG
TTGCGAACAAGGTCGGGATTGTGAGGGACTTGAAGCACATGGCTCGATTCTGCGAAGGGTTGGAGGATGGGAGGATTGGGCTAGAGAGATTGGGGGAATTGATGCAACAA
AAAAGGTTTGGAATGAAACACCATGCTGGTTCAGATAGCTTGTTGTGTGCTTGTATTCATACAAAGATGATTGAATTGTATGCTATGGAATCAAGTATTTGTGATGGGTA
TTTGTATGGAATCTCAACTAGAATTCAGTTCAAGTATATAATGTTTGGAACCCTTATGTTTAGTCAAATGTCATCATCAATTCCACTTAGTGAGTGA
Protein sequenceShow/hide protein sequence
MGGGNRARSRRGKLWIREVWASNIRHEISELDQCLQHYRILSIDTEFPGFIRSTPWGSIDQQLYEDLRFNVTKTKLIQLGLTALDELGNVGGIWEFNFSDFDSEFDAHNP
SSILFLKQNGHDFEKMKTKGIPLSTFTTDFVRVLKKNKIHRWITFHGLYDIGYLLQAMGFVEFPELMEEFAGMVANKVGIVRDLKHMARFCEGLEDGRIGLERLGELMQQ
KRFGMKHHAGSDSLLCACIHTKMIELYAMESSICDGYLYGISTRIQFKYIMFGTLMFSQMSSSIPLSE