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Sed0000859 (gene) of Chayote v1 genome

Gene IDSed0000859
OrganismSechium edule (Chayote v1)
DescriptionLow temperature and salt responsive protein family
Genome locationLG04:39697733..39698137
RNA-Seq ExpressionSed0000859
SyntenySed0000859
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143609.2 uncharacterized protein LOC101203086 [Cucumis sativus]1.2e-1996.3Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPP+GVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

XP_022139042.1 low temperature-induced protein lt101.2 [Momordica charantia]5.6e-2098.15Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

XP_022941664.1 low temperature-induced protein lt101.2 [Cucurbita moschata]1.2e-1996.3Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPP+GVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

XP_026412058.1 low temperature-induced protein lt101.2 [Papaver somniferum]7.3e-2096.3Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPP+GVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

XP_026427599.1 low temperature-induced protein lt101.2-like [Papaver somniferum]9.5e-2096.3Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETFVEI+LAILLPPVGVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

TrEMBL top hitse value%identityAlignment
A0A178W1U1 (thale cress) hypothetical protein6.0e-2096.3Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETF+EIILAILLPPVGVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

A0A6J1CCW8 low temperature-induced protein lt101.22.7e-2098.15Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

A0A6J1FUC5 low temperature-induced protein lt101.26.0e-2096.3Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPP+GVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

A0A6J1KKG3 low temperature-induced protein lt101.26.0e-2096.3Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETFVEIILAILLPP+GVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

Q941D7 At2g38901/At2g389016.0e-2096.3Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETF+EIILAILLPPVGVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

SwissProt top hitse value%identityAlignment
P68178 Salt stress-induced hydrophobic peptide ESI31.2e-1783.02Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV
        MGS T +E+ILAI+LPPVGVFLRY  GVEFWICLLLT+LGYIPGIIYA+YVLV
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV

P68179 Low temperature-induced protein lt101.11.2e-1783.02Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV
        MGS T +E+ILAI+LPPVGVFLRY  GVEFWICLLLT+LGYIPGIIYA+YVLV
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV

Q9ARD5 Low temperature-induced protein lt101.25.4e-1883.02Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV
        M S TF+E+ILAI+LPPVGVFLRYG  VEFWICLLLT+LGYIPGIIYA+YVLV
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV

Q9ZNQ7 Hydrophobic protein RCI2A5.4e-1882.69Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL
        M + TFV+II+AILLPP+GVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL

Q9ZNS6 Hydrophobic protein RCI2B1.1e-1569.23Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL
        M + TFVEIILAI+LPP+GVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family2.2e-1469.23Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL
        MGS  F+E++ AI +PPVGVFLRYG G+EFW+CLLLT+  +IPG+IYAIYVL
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL

AT2G38905.1 Low temperature and salt responsive protein family1.2e-2396.3Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG
        MGSETF+EIILAILLPPVGVFLRYGCGVEFWICLLLT+LGYIPGIIYAIYVLVG
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG

AT3G05880.1 Low temperature and salt responsive protein family3.9e-1982.69Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL
        M + TFV+II+AILLPP+GVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL

AT3G05890.1 Low temperature and salt responsive protein family8.0e-1769.23Show/hide
Query:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL
        M + TFVEIILAI+LPP+GVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++
Subjt:  MGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL

AT4G30650.1 Low temperature and salt responsive protein family2.1e-1270.59Show/hide
Query:  ETFVEIILAILLPPVGVFLRYG-CGVEFWICLLLTVLGYIPGIIYAIYVLV
        E F EI++AILLPP+GV L+ G C VEF ICL+LT+LGYIPGIIYA+YV+V
Subjt:  ETFVEIILAILLPPVGVFLRYG-CGVEFWICLLLTVLGYIPGIIYAIYVLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCTCCCCCTGTCCTGTGTTGAACTTAAAAACACCATTTTTGGAGTGCACAAATCCTTCCTGGTTCAAAATCATGGGCTCTGAAACTTTTGTAGAAATCATATT
AGCAATTCTTCTGCCACCGGTTGGAGTTTTCCTTCGCTATGGCTGTGGGGTGGAGTTTTGGATTTGTTTGTTGCTGACTGTATTGGGATATATACCTGGAATTATATATG
CAATATATGTGCTGGTTGGGTAG
mRNA sequenceShow/hide mRNA sequence
ACTACCAAATAGCAAAAGTGGCACACGTGTCAGTCCCTTCTCCCACGTGTCAGTCCCAAAACCATGAACTATGGCCACCTCCCCCTGTCCTGTGTTGAACTTAAAAACAC
CATTTTTGGAGTGCACAAATCCTTCCTGGTTCAAAATCATGGGCTCTGAAACTTTTGTAGAAATCATATTAGCAATTCTTCTGCCACCGGTTGGAGTTTTCCTTCGCTAT
GGCTGTGGGGTGGAGTTTTGGATTTGTTTGTTGCTGACTGTATTGGGATATATACCTGGAATTATATATGCAATATATGTGCTGGTTGGGTAG
Protein sequenceShow/hide protein sequence
MATSPCPVLNLKTPFLECTNPSWFKIMGSETFVEIILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG