; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000884 (gene) of Chayote v1 genome

Gene IDSed0000884
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:130393..131049
RNA-Seq ExpressionSed0000884
SyntenySed0000884
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581768.1 hypothetical protein SDJN03_21770, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3975Show/hide
Query:  MAQSFDQEEDRPAAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILET
        M Q ++ EE +P AGL+ GTRRGM +FRRR+M VARLGGKRSGR+VAWGR+LRKIRLRWVKLKCIA+VKKMK YYT LMKD++EAGAY  SYQHR++LET
Subjt:  MAQSFDQEEDRPAAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILET

Query:  SFAIPMLGVSFFTHST
        SFAIP+LGVS  THS+
Subjt:  SFAIPMLGVSFFTHST

KAG7018218.1 hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3673.28Show/hide
Query:  MAQSFDQEEDRPAAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILET
        M Q ++ EE +P AGL    RRGM +FRRR+M VARLGGKRSGR+VAWGR+LRKIRLRWVKLKCIA+VKKMK YYT LMKD++EAGAY  SYQHR++LET
Subjt:  MAQSFDQEEDRPAAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILET

Query:  SFAIPMLGVSFFTHST
        SFAIP+LGVS  THS+
Subjt:  SFAIPMLGVSFFTHST

XP_022948735.1 uncharacterized protein LOC111452314 [Cucurbita moschata]1.7e-4178.69Show/hide
Query:  MAQSFDQEEDRPA-AGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILE
        M QS +QEE + A AGL+W TR+G IQFRRR+MAVARLGGKRSGR+VAWGR LRKIRLRWVKLKCIA+VKK+K+Y  SLMKD+MEAGAY DSYQHRL+LE
Subjt:  MAQSFDQEEDRPA-AGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILE

Query:  TSFAIPMLGVSFFTHSTHATTS
        TSFAIP+LGVSF THSTHA  S
Subjt:  TSFAIPMLGVSFFTHSTHATTS

XP_022956317.1 uncharacterized protein LOC111458050 [Cucurbita moschata]1.4e-3873.11Show/hide
Query:  MAQSFDQEEDRPAAGLQWGTRRGM---IQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLI
        M Q ++ EE +P AGL+ GTRRG    ++FRRR+M VARLGGKRSGR+VAWGR+LRKIRLRWVKLKCIA+VKKMK YYT LMKD++EAGAY  SYQHRL+
Subjt:  MAQSFDQEEDRPAAGLQWGTRRGM---IQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLI

Query:  LETSFAIPMLGVSFFTHST
        LETSFAIP+LGVS  THS+
Subjt:  LETSFAIPMLGVSFFTHST

XP_038891072.1 uncharacterized protein LOC120080455 [Benincasa hispida]1.7e-4176Show/hide
Query:  MAQSFDQEEDRPAAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAY---TDSYQHRLI
        MAQS++Q E +PAAGL+WG RRG IQFRRR+M VARLGGKRSGR+VAWGR+LRKIRLRWVK+KCIA+VKK+K+YYTSLMKD+ME GAY    DSYQHRL+
Subjt:  MAQSFDQEEDRPAAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAY---TDSYQHRLI

Query:  LETSFAIPMLGVSFFTHST-HATTS
        +ETSFAIP+LGVS  THS+  ATTS
Subjt:  LETSFAIPMLGVSFFTHST-HATTS

TrEMBL top hitse value%identityAlignment
A0A0A0LBW7 Uncharacterized protein1.0e-3175.24Show/hide
Query:  RRGMIQF-RRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGA--YTDSYQHRLILETSFAIPMLGVSFFTHST-
        RR  IQF RRR+MAVARLGGKRSGR+V WGRI+RKIRL+WVK+KCI +VKKMK+YY  LMKD+MEAGA  Y DSYQHRL+LETSFAIP+LGVS  THS+ 
Subjt:  RRGMIQF-RRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGA--YTDSYQHRLILETSFAIPMLGVSFFTHST-

Query:  HATTS
        HA T+
Subjt:  HATTS

A0A5D3DCV1 Uncharacterized protein6.1e-3267.23Show/hide
Query:  MAQSFDQEEDRPAAGLQWGTRRGMIQF-RRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGA--YTDSYQHRLI
        MA+S+   ++          RR  IQF RRRKMAVARLGGKRSGR++AWGRI+RKIRL+WVK+KCI +VKKMK+YY  LMKD+MEAGA  Y DSYQHRL+
Subjt:  MAQSFDQEEDRPAAGLQWGTRRGMIQF-RRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGA--YTDSYQHRLI

Query:  LETSFAIPMLGVSFFTHST
        LETSFAIP+LGVS  THS+
Subjt:  LETSFAIPMLGVSFFTHST

A0A6J1D3L4 uncharacterized protein LOC1110169637.7e-1954.55Show/hide
Query:  EDRPAAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVA-WGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAG---AYTDSYQHRLILETSFAI
        E     GL+   RRG+   RRR+M VARLGG  SG      GR++RKIR+RWVKL+C+A+VKKMK++Y  ++KDV+EA    AY +SYQHR++LETSFAI
Subjt:  EDRPAAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVA-WGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAG---AYTDSYQHRLILETSFAI

Query:  PMLGVSFFTH
        P+L  S  T+
Subjt:  PMLGVSFFTH

A0A6J1GAR0 uncharacterized protein LOC1114523148.5e-4278.69Show/hide
Query:  MAQSFDQEEDRPA-AGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILE
        M QS +QEE + A AGL+W TR+G IQFRRR+MAVARLGGKRSGR+VAWGR LRKIRLRWVKLKCIA+VKK+K+Y  SLMKD+MEAGAY DSYQHRL+LE
Subjt:  MAQSFDQEEDRPA-AGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILE

Query:  TSFAIPMLGVSFFTHSTHATTS
        TSFAIP+LGVSF THSTHA  S
Subjt:  TSFAIPMLGVSFFTHSTHATTS

A0A6J1GVZ8 uncharacterized protein LOC1114580506.7e-3973.11Show/hide
Query:  MAQSFDQEEDRPAAGLQWGTRRGM---IQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLI
        M Q ++ EE +P AGL+ GTRRG    ++FRRR+M VARLGGKRSGR+VAWGR+LRKIRLRWVKLKCIA+VKKMK YYT LMKD++EAGAY  SYQHRL+
Subjt:  MAQSFDQEEDRPAAGLQWGTRRGM---IQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLI

Query:  LETSFAIPMLGVSFFTHST
        LETSFAIP+LGVS  THS+
Subjt:  LETSFAIPMLGVSFFTHST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54120.1 unknown protein3.3e-1441.12Show/hide
Query:  QWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWG-----RILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILE-TSFAIPMLGVS
        +W   R  I  RRRK  V RLGGK S   V+ G     +++R+++LRW+KL  + +VKK+K +Y +L+K+ ++AGA  ++ Q R+ +E  +FA+P LG+S
Subjt:  QWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWG-----RILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILE-TSFAIPMLGVS

Query:  FFTHSTH
        F + S H
Subjt:  FFTHSTH

AT3G14060.1 unknown protein1.5e-1140.2Show/hide
Query:  AAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWG--RILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILET-SFAIPMLGV
        ++  +W + R  I  RRRK  V RLGGK S    ++   +++ ++RL+W++L  + +VKK+K YY +++K+  EAGA T   Q R+ +ET +FA P LG+
Subjt:  AAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWG--RILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILET-SFAIPMLGV

Query:  SF
        SF
Subjt:  SF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAAAGCTTTGATCAGGAAGAAGACCGGCCTGCAGCAGGGCTGCAGTGGGGGACGCGTCGGGGGATGATCCAGTTTCGGAGGCGAAAAATGGCGGTGGCACGGCT
CGGGGGGAAGCGATCGGGGCGGGTGGTGGCGTGGGGGAGGATTCTGAGGAAGATAAGGCTGAGATGGGTGAAATTGAAATGCATAGCCATAGTGAAGAAGATGAAAAGAT
ATTACACAAGTTTGATGAAGGATGTAATGGAAGCAGGAGCATATACTGACTCATATCAGCATAGGCTTATCTTAGAGACTTCTTTTGCGATTCCAATGCTGGGTGTCTCT
TTCTTTACACATTCAACTCATGCTACAACTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAAAGCTTTGATCAGGAAGAAGACCGGCCTGCAGCAGGGCTGCAGTGGGGGACGCGTCGGGGGATGATCCAGTTTCGGAGGCGAAAAATGGCGGTGGCACGGCT
CGGGGGGAAGCGATCGGGGCGGGTGGTGGCGTGGGGGAGGATTCTGAGGAAGATAAGGCTGAGATGGGTGAAATTGAAATGCATAGCCATAGTGAAGAAGATGAAAAGAT
ATTACACAAGTTTGATGAAGGATGTAATGGAAGCAGGAGCATATACTGACTCATATCAGCATAGGCTTATCTTAGAGACTTCTTTTGCGATTCCAATGCTGGGTGTCTCT
TTCTTTACACATTCAACTCATGCTACAACTTCATAGTTTCTACAACAATATGTTAATACTTTTGAATTTCTTTTGTTGTTTTAGAGTCCACTTGGAATGATTTTTCAAGT
GTTTAAAACATTTTTTATCATAAACACTTTTTTAAGCACTTGAAAATTATTCCAAACAGACACTTGGGTTTAATTCTCTGTCTTATGATGAATGAGAAAAAAAATGTAAA
GTTTCCTTCTCTACTTGAAGTTTTTTTTATTTTTGTTTTTCTATTTTTATCAATCAAGCTTTGTCTCTACCATCCATTCAATATATTCCTTGTTATTTCATTTTGCG
Protein sequenceShow/hide protein sequence
MAQSFDQEEDRPAAGLQWGTRRGMIQFRRRKMAVARLGGKRSGRVVAWGRILRKIRLRWVKLKCIAIVKKMKRYYTSLMKDVMEAGAYTDSYQHRLILETSFAIPMLGVS
FFTHSTHATTS