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Sed0000886 (gene) of Chayote v1 genome

Gene IDSed0000886
OrganismSechium edule (Chayote v1)
DescriptionSpindle pole body component protein
Genome locationLG07:32659681..32660537
RNA-Seq ExpressionSed0000886
SyntenySed0000886
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577452.1 hypothetical protein SDJN03_25026, partial [Cucurbita argyrosperma subsp. sororia]7.8e-4073.57Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS
        MKFL + +SCCVPVNMSRLEN EA     VEEM+SLAPI+TRK RRRKRGAL  SAAKLAADWKPSLGAISEDKVV+V+ EREKSDD+T ESERSVKR+S
Subjt:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS

Query:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF
        GS D E      R N    RRSP++IPVVIPAF PTPFLF
Subjt:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF

KAG7015524.1 hypothetical protein SDJN02_23160 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3973.57Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS
        MKFL + +SCCVPVNMSRLE  EA     VEEM+SLAPI+TRK RRRKRGAL  SAAKLAADWKPSLGAISEDKVV+V+ EREKSDD+T ESERSVKR+S
Subjt:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS

Query:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF
        GSRD E      R N    RRSP++IPVVIPAF PTPFLF
Subjt:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF

XP_022932132.1 uncharacterized protein LOC111438455 [Cucurbita moschata]1.2e-4074.29Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS
        MKFL + +SCCVPVNMSRLEN EA     VEEM+SLAPI+TRK RRRKRGAL  SAAKLAADWKPSLGAISEDKVV+V+ EREKSDD+T ESERSVKR+S
Subjt:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS

Query:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF
        GSRD E      R N    RRSP++IPVVIPAF PTPFLF
Subjt:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF

XP_022985273.1 uncharacterized protein LOC111483313 [Cucurbita maxima]7.8e-4073.57Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS
        MKFL + +SCCVPVNMSRLEN EA     VEEM+SLAPI+TRK RRRKRGAL  SAAKLAADWKPSLGAISEDKVV+V+ EREKSDD+T  SERSVKR+S
Subjt:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS

Query:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF
        GSRD E      R N    RRSP++IPVVIPAF PTPFLF
Subjt:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF

XP_038905048.1 uncharacterized protein LOC120091204 [Benincasa hispida]3.9e-3970.42Show/hide
Query:  MKFLLDIISCCVPVNMSRLENRE-----AVEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS
        MKFL + +SCCVPVNMSR+EN E      V+E+RSLAPI+TRK RRRKR A   SAAKLA DWKPSLGAISEDKVV+VVMEREKSD++T ESERSVKR+S
Subjt:  MKFLLDIISCCVPVNMSRLENRE-----AVEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS

Query:  GSRDEETT-LHRQN-------RRSPSAIPVVIPAFYPTPFLF
        GSRD E+  +H +N       RRSP+AIPVVIPAF PTPFLF
Subjt:  GSRDEETT-LHRQN-------RRSPSAIPVVIPAFYPTPFLF

TrEMBL top hitse value%identityAlignment
A0A0A0L6G1 Uncharacterized protein1.5e-3668.53Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREAVE-----EMRSLAPISTRKLRRRKRGA-LTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRR
        MKFL + +SCCVPVNMSR++N E  E     EMRSL PI+TRK RRRKR A L S+AAKLAADWKPSLGAISEDKVV+VVMEREKSD++T E ERSVKR+
Subjt:  MKFLLDIISCCVPVNMSRLENREAVE-----EMRSLAPISTRKLRRRKRGA-LTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRR

Query:  SGSRDEETT-LHRQN-------RRSPSAIPVVIPAFYPTPFLF
        S SRD E+  +H +N       R+SPSAIPVVIPAF P PFLF
Subjt:  SGSRDEETT-LHRQN-------RRSPSAIPVVIPAFYPTPFLF

A0A1S3BTM8 uncharacterized protein LOC1034933941.6e-3870.42Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREAVE-----EMRSLAPISTRKLRRRKRGA-LTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRR
        MKFL + +SCCVPVNMSR+EN E  E     EMR+LAPI+TRK RRRKR A L S+AAKLAADWKPSLGAISEDKVV+VVMEREKSDD+  E ERSVKR+
Subjt:  MKFLLDIISCCVPVNMSRLENREAVE-----EMRSLAPISTRKLRRRKRGA-LTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRR

Query:  SGSRDEETTLH-RQN------RRSPSAIPVVIPAFYPTPFLF
        SGSRD E+ +H R+N      R++PSAIPVVIPAF P PFLF
Subjt:  SGSRDEETTLH-RQN------RRSPSAIPVVIPAFYPTPFLF

A0A6J1EVT0 uncharacterized protein LOC1114384555.9e-4174.29Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS
        MKFL + +SCCVPVNMSRLEN EA     VEEM+SLAPI+TRK RRRKRGAL  SAAKLAADWKPSLGAISEDKVV+V+ EREKSDD+T ESERSVKR+S
Subjt:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS

Query:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF
        GSRD E      R N    RRSP++IPVVIPAF PTPFLF
Subjt:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF

A0A6J1FP47 uncharacterized protein LOC1114472257.4e-3666.43Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS
        MKFL + +SCCVPV++SR+EN EA      EE+RSLAPI+TR  RRR+RGAL +SAAK+A DW PSLGAISED VV+VVMER+KS+DRT ESERSVKR+S
Subjt:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS

Query:  GSRDEETT-LHRQN-----RRSPSAIPVVIPAFYPTPFLF
        GS++ +   +H +N     RRSP+AIPVVIPAF PTPFLF
Subjt:  GSRDEETT-LHRQN-----RRSPSAIPVVIPAFYPTPFLF

A0A6J1JD62 uncharacterized protein LOC1114833133.8e-4073.57Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS
        MKFL + +SCCVPVNMSRLEN EA     VEEM+SLAPI+TRK RRRKRGAL  SAAKLAADWKPSLGAISEDKVV+V+ EREKSDD+T  SERSVKR+S
Subjt:  MKFLLDIISCCVPVNMSRLENREA-----VEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRS

Query:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF
        GSRD E      R N    RRSP++IPVVIPAF PTPFLF
Subjt:  GSRDEET--TLHRQN----RRSPSAIPVVIPAFYPTPFLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54585.1 unknown protein5.7e-0427.07Show/hide
Query:  MKFLLDIISCCVPVNMSRLENREAVEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRSGSRDE
        MKFLL+++  C      +       ++  S    +  K RRR++    +      A+W+PSL  ISE+K  +  +  EK++++     +S     G    
Subjt:  MKFLLDIISCCVPVNMSRLENREAVEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRSGSRDE

Query:  ET----TLHRQNRRSPSAIPVVIPAFYPTPFLF
         +       R +    +A   VIPAF PTPF+F
Subjt:  ET----TLHRQNRRSPSAIPVVIPAFYPTPFLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCTTCTTGATATCATTTCTTGCTGCGTGCCCGTCAACATGTCGCGGCTCGAGAATCGGGAGGCGGTCGAGGAGATGAGATCTCTGGCTCCGATTTCCACCAG
AAAACTCCGCCGGAGAAAACGAGGGGCATTGACTTCGTCGGCAGCGAAGCTGGCTGCGGATTGGAAGCCGTCGCTTGGAGCAATTTCGGAGGACAAGGTAGTTGTGGTGG
TGATGGAGAGAGAGAAGAGCGATGATCGGACCGTGGAATCGGAACGATCTGTGAAGAGGAGAAGCGGATCTCGAGACGAAGAGACCACCCTTCACAGACAAAACAGGCGA
AGTCCGAGTGCGATTCCGGTCGTGATTCCGGCTTTTTATCCGACTCCCTTCTTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ACCAGTACGGGACGATAGAGTTGAAAATGGACTGTCTCTAATCACTCATTGGTAGCGATTCTATTATTTTCACACTTTAAACCTTGCCTCTTTCTTGGTCTTCTTCCCAT
GAAATTCCTTCTTGATATCATTTCTTGCTGCGTGCCCGTCAACATGTCGCGGCTCGAGAATCGGGAGGCGGTCGAGGAGATGAGATCTCTGGCTCCGATTTCCACCAGAA
AACTCCGCCGGAGAAAACGAGGGGCATTGACTTCGTCGGCAGCGAAGCTGGCTGCGGATTGGAAGCCGTCGCTTGGAGCAATTTCGGAGGACAAGGTAGTTGTGGTGGTG
ATGGAGAGAGAGAAGAGCGATGATCGGACCGTGGAATCGGAACGATCTGTGAAGAGGAGAAGCGGATCTCGAGACGAAGAGACCACCCTTCACAGACAAAACAGGCGAAG
TCCGAGTGCGATTCCGGTCGTGATTCCGGCTTTTTATCCGACTCCCTTCTTGTTCTGAAGCAGTTACGTAATATATATGTATATTTTTTTATTGCATAGTAATAATAATT
TGTATAATTAATTAAATTTTGAAAAAAAAAAGTTGGGGTTGAGGAGGAAACTTCTCAATGGAATTGTAGCTTCTTTAAATCTTCTCAATCTCTGCAATTTAGATGTACCC
TTTTCTTCATGATGCCTTTCGAATTAATTCTAGGTCAAGATTATTCAA
Protein sequenceShow/hide protein sequence
MKFLLDIISCCVPVNMSRLENREAVEEMRSLAPISTRKLRRRKRGALTSSAAKLAADWKPSLGAISEDKVVVVVMEREKSDDRTVESERSVKRRSGSRDEETTLHRQNRR
SPSAIPVVIPAFYPTPFLF