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Sed0000897 (gene) of Chayote v1 genome

Gene IDSed0000897
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG09:862993..863457
RNA-Seq ExpressionSed0000897
SyntenySed0000897
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040002.1 hypothetical protein E6C27_scaffold122G002850 [Cucumis melo var. makuwa]2.3e-0643.12Show/hide
Query:  EHQNF---LLYAIIKVKSNRSRASVFLGSNAIIFSLLCRDFDRSSSEEEMEEPIAYYDDYSDTEQQRSDKDCINENYVEDDREEIEDDLEKRSQEFIEMM
        +H+NF   L+  I  VKS  SRAS+FL SN I+  L      R SS+E+      +   +SD E    +  C+ ++  E   E I+DDLEK++QEFI+MM
Subjt:  EHQNF---LLYAIIKVKSNRSRASVFLGSNAIIFSLLCRDFDRSSSEEEMEEPIAYYDDYSDTEQQRSDKDCINENYVEDDREEIEDDLEKRSQEFIEMM

Query:  NNFWREENI
        N FWREE I
Subjt:  NNFWREENI
KAE8646698.1 hypothetical protein Csa_005140 [Cucumis sativus]8.8e-0641.84Show/hide
Query:  LFLLCIIFALNFFSFFFFFCFSTLSVIFEHQNFL---LYAIIKVKSNRSRASVFLGSNAIIFSLLCRDFDRSSSEEEMEEPI--AYYDDYSDTEQQRSDK
        +  LCII  L+FF FF         V F H+N +   +  ++ VKS  SRAS+FL SN II  L  +   + SS+EE EE           D E    + 
Subjt:  LFLLCIIFALNFFSFFFFFCFSTLSVIFEHQNFL---LYAIIKVKSNRSRASVFLGSNAIIFSLLCRDFDRSSSEEEMEEPI--AYYDDYSDTEQQRSDK

Query:  DCINENYVEDDREE--IEDDLEKRSQEFIEMMNNFWREENI
         C+ ++  ED  EE  I+DDLEK++QEFI+MMN FWREE I
Subjt:  DCINENYVEDDREE--IEDDLEKRSQEFIEMMNNFWREENI
TrEMBL top hitse value%identityAlignment
A0A0A0K9S4 Uncharacterized protein2.1e-0543.1Show/hide
Query:  VIFEHQNFL---LYAIIKVKSNRSRASVFLGSNAIIFSLLCRDFDRSSSEEEMEEPI--AYYDDYSDTEQQRSDKDCINENYVEDDREE--IEDDLEKRS
        V F H+N +   +  ++ VKS  SRAS+FL SN II  L  +   + SS+EE EE           D E    +  C+ ++  ED  EE  I+DDLEK++
Subjt:  VIFEHQNFL---LYAIIKVKSNRSRASVFLGSNAIIFSLLCRDFDRSSSEEEMEEPI--AYYDDYSDTEQQRSDKDCINENYVEDDREE--IEDDLEKRS

Query:  QEFIEMMNNFWREENI
        QEFI+MMN FWREE I
Subjt:  QEFIEMMNNFWREENI
A0A5A7T9A6 Uncharacterized protein1.1e-0643.12Show/hide
Query:  EHQNF---LLYAIIKVKSNRSRASVFLGSNAIIFSLLCRDFDRSSSEEEMEEPIAYYDDYSDTEQQRSDKDCINENYVEDDREEIEDDLEKRSQEFIEMM
        +H+NF   L+  I  VKS  SRAS+FL SN I+  L      R SS+E+      +   +SD E    +  C+ ++  E   E I+DDLEK++QEFI+MM
Subjt:  EHQNF---LLYAIIKVKSNRSRASVFLGSNAIIFSLLCRDFDRSSSEEEMEEPIAYYDDYSDTEQQRSDKDCINENYVEDDREEIEDDLEKRSQEFIEMM

Query:  NNFWREENI
        N FWREE I
Subjt:  NNFWREENI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAACTTCACTTCTCTGATTTCTTGTTTCTTCTTTGCATCATCTTTGCTCTCAATTTCTTCTCTTTCTTCTTCTTCTTTTGTTTCTCGACTCTATCGGTGATTTT
CGAGCATCAAAACTTCCTACTATATGCAATCATTAAGGTCAAATCAAATCGGAGTCGTGCTTCGGTGTTTCTTGGGTCGAATGCCATCATTTTCAGCCTCTTGTGCCGGG
ATTTTGATCGATCATCGAGCGAAGAAGAGATGGAAGAGCCAATTGCATATTATGATGATTATAGCGACACCGAACAACAACGTAGTGATAAAGATTGTATTAATGAAAAT
TATGTTGAAGATGATCGAGAAGAAATCGAAGATGATTTGGAGAAAAGGTCTCAAGAGTTCATTGAGATGATGAACAATTTCTGGAGAGAAGAAAATATTCTTGAGCAAGC
TCAACAATCTGCAAAGATCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAACTTCACTTCTCTGATTTCTTGTTTCTTCTTTGCATCATCTTTGCTCTCAATTTCTTCTCTTTCTTCTTCTTCTTTTGTTTCTCGACTCTATCGGTGATTTT
CGAGCATCAAAACTTCCTACTATATGCAATCATTAAGGTCAAATCAAATCGGAGTCGTGCTTCGGTGTTTCTTGGGTCGAATGCCATCATTTTCAGCCTCTTGTGCCGGG
ATTTTGATCGATCATCGAGCGAAGAAGAGATGGAAGAGCCAATTGCATATTATGATGATTATAGCGACACCGAACAACAACGTAGTGATAAAGATTGTATTAATGAAAAT
TATGTTGAAGATGATCGAGAAGAAATCGAAGATGATTTGGAGAAAAGGTCTCAAGAGTTCATTGAGATGATGAACAATTTCTGGAGAGAAGAAAATATTCTTGAGCAAGC
TCAACAATCTGCAAAGATCTATTGA
Protein sequenceShow/hide protein sequence
MMELHFSDFLFLLCIIFALNFFSFFFFFCFSTLSVIFEHQNFLLYAIIKVKSNRSRASVFLGSNAIIFSLLCRDFDRSSSEEEMEEPIAYYDDYSDTEQQRSDKDCINEN
YVEDDREEIEDDLEKRSQEFIEMMNNFWREENILEQAQQSAKIY