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Sed0000912 (gene) of Chayote v1 genome

Gene IDSed0000912
OrganismSechium edule (Chayote v1)
DescriptionLate embryogenesis-abundant protein
Genome locationLG07:5907208..5908220
RNA-Seq ExpressionSed0000912
SyntenySed0000912
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461081.1 PREDICTED: late embryogenesis abundant protein D-7 [Cucumis melo]3.2e-3165.22Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MASHNQSYRAGETKG+      QAMGT+GEKA+EAKE TYETGRA +DKAH  A+STK W                      AS TAQ  REKAQ GKET
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMA-HNLDDVD
        TGGILEQTG+KVKSMAQGA +AVKSTFGMA  N DDVD
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMA-HNLDDVD

XP_011659535.1 late embryogenesis abundant protein D-7 [Cucumis sativus]1.6e-3063.5Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MASHNQSYRAGETKG+      QAMG +GEKA+EAKE TYETGRAAR+KAH  A+STK W                      AS  AQ  REKAQ GKET
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD
        TGGILEQTG+KVKSMAQGA +AVKSTFGMA + +DVD
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD

XP_022150150.1 late embryogenesis abundant protein Dc3-like [Momordica charantia]8.1e-3568.61Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MA+H+Q +RAGETKG+      Q M T+GEKA+E K+ TYETGRAARDKA E           SK+QSGSYLS+KAQ+TKEKAS  AQ AREKAQ GKE 
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD
        TGGILEQTG+KVKSMAQGA DAVKSTFGMA + DDVD
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD

XP_023548700.1 late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo]1.2e-3866.67Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MASHNQSY+AGETKG+      QAMGT+G+KA+EAKE TYETG+AA+DKAH  AESTK WA++SKDQ+GSY+SDKAQ+           AREKAQ GKET
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLD--------DVDTHRRG
        TGGILEQTG+KVKSMAQGA +AVKSTFGMAH+ D        D  T+RRG
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLD--------DVDTHRRG

XP_038899464.1 LOW QUALITY PROTEIN: late embryogenesis abundant protein 2-like [Benincasa hispida]1.7e-3264.96Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MASHNQSYRAGETKG+      + MGT+G+KA+EAKE TYETGRAAR+KAH  A+STK W                      AS TAQGAREKAQ GKET
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD
        TGGILEQTG+KVKSMAQGA DAVKSTFGMA + D+VD
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD

TrEMBL top hitse value%identityAlignment
A0A0A0K6E1 Uncharacterized protein7.6e-3163.5Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MASHNQSYRAGETKG+      QAMG +GEKA+EAKE TYETGRAAR+KAH  A+STK W                      AS  AQ  REKAQ GKET
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD
        TGGILEQTG+KVKSMAQGA +AVKSTFGMA + +DVD
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD

A0A1S3CEC9 late embryogenesis abundant protein D-71.5e-3165.22Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MASHNQSYRAGETKG+      QAMGT+GEKA+EAKE TYETGRA +DKAH  A+STK W                      AS TAQ  REKAQ GKET
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMA-HNLDDVD
        TGGILEQTG+KVKSMAQGA +AVKSTFGMA  N DDVD
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMA-HNLDDVD

A0A5A7UUB6 Late embryogenesis abundant protein D-71.5e-3165.22Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MASHNQSYRAGETKG+      QAMGT+GEKA+EAKE TYETGRA +DKAH  A+STK W                      AS TAQ  REKAQ GKET
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMA-HNLDDVD
        TGGILEQTG+KVKSMAQGA +AVKSTFGMA  N DDVD
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMA-HNLDDVD

A0A6J1D7P2 late embryogenesis abundant protein Dc3-like3.9e-3568.61Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MA+H+Q +RAGETKG+      Q M T+GEKA+E K+ TYETGRAARDKA E           SK+QSGSYLS+KAQ+TKEKAS  AQ AREKAQ GKE 
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD
        TGGILEQTG+KVKSMAQGA DAVKSTFGMA + DDVD
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD

A0A6J1GPH8 late embryogenesis abundant protein 73.2e-2959.46Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MASHNQSY+AGETKG+      QAMGT+G                  DKAH  AESTK WA++SKDQ+GSY+SDKAQ+           AREKAQ GKET
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLD------DVDTHRRG
        TGGILEQTG+KVKSMAQGA DAVKSTFGMAH+ D      D  T+RRG
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLD------DVDTHRRG

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 11.4e-1842.94Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETA---------------ESTKNWAEKSKD---QSGSYLSDKAQ----S
        MASH+QSY+AGET G+      Q +G + +KAQ AKE   +  + A+DK  +TA               E T+  A+ +KD   Q+     DK Q    +
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETA---------------ESTKNWAEKSKD---QSGSYLSDKAQ----S

Query:  TKEKASVTAQGAREK-----------AQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD
        TKEKA  T   AREK           AQ GK+ + G L+QTG+KVK MAQGATDAVK TFGMA++  D D
Subjt:  TKEKASVTAQGAREK-----------AQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD

O49817 Late embryogenesis abundant protein 23.4e-2045.95Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETA----ESTKNWAEKSKD---QSGSYLSDKAQST----KEKASVTAQG
        M SH+QSYRAGE KG+      Q +G + +KAQ AKE   +  + A+DK  +TA    E T+  A+ +KD   Q+     +KAQ T    KEK S   Q 
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQEAKEMTYETGRAARDKAHETA----ESTKNWAEKSKD---QSGSYLSDKAQST----KEKASVTAQG

Query:  AREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD
         +E AQ GK+ + G L+QTG+K K MAQGATDAVK TFGM ++  D D
Subjt:  AREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDDVD

P13939 Late embryogenesis abundant protein D-74.2e-1846.67Show/hide
Query:  MASHNQSYRAGETKGQVQAMG-----TVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET
        MASH QSY+AG  +G+    G     ++ EKA+ AK+ T ET  AA+ K  ETAE+ K   +K++          A++T +K   TA  AR KA+  KET
Subjt:  MASHNQSYRAGETKGQVQAMG-----TVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKET

Query:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDD
        +GGIL+Q G+KV++ AQGATDAVK TFGMA   +D
Subjt:  TGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDD

Q96270 Late embryogenesis abundant protein 78.7e-2450.35Show/hide
Query:  MASH-NQSYRAGETKGQVQ-----AMGTVGEKAQEAKEMTYETGRAARDKAHETAES-----------TKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQ
        MASH  QSY+AGET+G+ Q     AMGT+G+K Q AK+ T ET ++A+ KAHETA+S           T+  A++SKD++GSY+S+  ++ K KA   A+
Subjt:  MASH-NQSYRAGETKGQVQ-----AMGTVGEKAQEAKEMTYETGRAARDKAHETAES-----------TKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQ

Query:  GAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGM
          +E A+ GKE T GIL QTG++VK MA GATDAVK T G+
Subjt:  GAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGM

Q9LW12 Late embryogenesis abundant protein 295.5e-1838.58Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQE----------------------AKEMTYETGRAARDKAHETAESTK--------------------
        MAS+ QSY+AGET+G+      QAMGT+ +KA+E                      AK+ T +T +AA+ KAHETA+S K                    
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQE----------------------AKEMTYETGRAARDKAHETAESTK--------------------

Query:  ---------NWAEKSKDQSGSYLS-----------DKAQSTKEKASVTAQGAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDD
                 + A ++KD++GSYLS           D AQ TKE A   AQ  +E A+ G++ TGG L QTG+ VK MA GA DAVK TFGMA   +D
Subjt:  ---------NWAEKSKDQSGSYLS-----------DKAQSTKEKASVTAQGAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDD

Arabidopsis top hitse value%identityAlignment
AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein6.2e-2550.35Show/hide
Query:  MASH-NQSYRAGETKGQVQ-----AMGTVGEKAQEAKEMTYETGRAARDKAHETAES-----------TKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQ
        MASH  QSY+AGET+G+ Q     AMGT+G+K Q AK+ T ET ++A+ KAHETA+S           T+  A++SKD++GSY+S+  ++ K KA   A+
Subjt:  MASH-NQSYRAGETKGQVQ-----AMGTVGEKAQEAKEMTYETGRAARDKAHETAES-----------TKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQ

Query:  GAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGM
          +E A+ GKE T GIL QTG++VK MA GATDAVK T G+
Subjt:  GAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGM

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein6.2e-2550.35Show/hide
Query:  MASH-NQSYRAGETKGQVQ-----AMGTVGEKAQEAKEMTYETGRAARDKAHETAES-----------TKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQ
        MASH  QSY+AGET+G+ Q     AMGT+G+K Q AK+ T ET ++A+ KAHETA+S           T+  A++SKD++GSY+S+  ++ K KA   A+
Subjt:  MASH-NQSYRAGETKGQVQ-----AMGTVGEKAQEAKEMTYETGRAARDKAHETAES-----------TKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQ

Query:  GAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGM
          +E A+ GKE T GIL QTG++VK MA GATDAVK T G+
Subjt:  GAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGM

AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein3.9e-1938.58Show/hide
Query:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQE----------------------AKEMTYETGRAARDKAHETAESTK--------------------
        MAS+ QSY+AGET+G+      QAMGT+ +KA+E                      AK+ T +T +AA+ KAHETA+S K                    
Subjt:  MASHNQSYRAGETKGQV-----QAMGTVGEKAQE----------------------AKEMTYETGRAARDKAHETAESTK--------------------

Query:  ---------NWAEKSKDQSGSYLS-----------DKAQSTKEKASVTAQGAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDD
                 + A ++KD++GSYLS           D AQ TKE A   AQ  +E A+ G++ TGG L QTG+ VK MA GA DAVK TFGMA   +D
Subjt:  ---------NWAEKSKDQSGSYLS-----------DKAQSTKEKASVTAQGAREKAQHGKETTGGILEQTGDKVKSMAQGATDAVKSTFGMAHNLDD

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein6.2e-0936.13Show/hide
Query:  QSYRAGETKGQVQAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKETTGGILEQTGD
        Q + AG+ +GQ Q      EKA++  E   +T ++A DK   TA+ T++  +K+        +D  QS ++K +  +  A + AQH +E   G+  QTG+
Subjt:  QSYRAGETKGQVQAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKETTGGILEQTGD

Query:  KVKSMAQGATDAVKSTFGM
         VK+MAQGA D VK++ GM
Subjt:  KVKSMAQGATDAVKSTFGM

AT4G21020.1 Late embryogenesis abundant protein (LEA) family protein1.7e-0634.71Show/hide
Query:  QSYRAGETKGQVQAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQ--SGSY-LSDKAQSTKEK----ASVTAQGAREKAQHGKETTGG
        Q+ +    +G  +A     E  ++AK+  YET   A+D A+   E  K++AE++KD+   G+Y  +DKA+ TKEK    A  T   A+EKA+H KE    
Subjt:  QSYRAGETKGQVQAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQ--SGSY-LSDKAQSTKEK----ASVTAQGAREKAQHGKETTGG

Query:  ILEQTGDKVKSMAQGATDAVK
         +++ G+  K  A+G  + VK
Subjt:  ILEQTGDKVKSMAQGATDAVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCACACAATCAGAGCTACAGAGCTGGTGAAACCAAGGGCCAAGTTCAGGCGATGGGCACAGTGGGGGAGAAGGCCCAAGAAGCAAAGGAAATGACGTACGAGAC
TGGGCGGGCCGCAAGGGACAAGGCCCATGAAACAGCTGAATCCACGAAGAATTGGGCCGAGAAGTCCAAAGATCAGTCGGGAAGCTACCTGTCGGATAAGGCCCAATCTA
CAAAGGAAAAGGCCTCGGTCACGGCCCAAGGGGCCCGAGAAAAGGCCCAACATGGAAAAGAAACCACAGGAGGGATTTTGGAACAGACGGGGGACAAAGTGAAGAGTATG
GCCCAAGGAGCAACGGATGCTGTTAAAAGCACTTTTGGTATGGCCCACAATCTTGATGACGTGGACACCCATCGCAGGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCACACAATCAGAGCTACAGAGCTGGTGAAACCAAGGGCCAAGTTCAGGCGATGGGCACAGTGGGGGAGAAGGCCCAAGAAGCAAAGGAAATGACGTACGAGAC
TGGGCGGGCCGCAAGGGACAAGGCCCATGAAACAGCTGAATCCACGAAGAATTGGGCCGAGAAGTCCAAAGATCAGTCGGGAAGCTACCTGTCGGATAAGGCCCAATCTA
CAAAGGAAAAGGCCTCGGTCACGGCCCAAGGGGCCCGAGAAAAGGCCCAACATGGAAAAGAAACCACAGGAGGGATTTTGGAACAGACGGGGGACAAAGTGAAGAGTATG
GCCCAAGGAGCAACGGATGCTGTTAAAAGCACTTTTGGTATGGCCCACAATCTTGATGACGTGGACACCCATCGCAGGGGCTAA
Protein sequenceShow/hide protein sequence
MASHNQSYRAGETKGQVQAMGTVGEKAQEAKEMTYETGRAARDKAHETAESTKNWAEKSKDQSGSYLSDKAQSTKEKASVTAQGAREKAQHGKETTGGILEQTGDKVKSM
AQGATDAVKSTFGMAHNLDDVDTHRRG