; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0000918 (gene) of Chayote v1 genome

Gene IDSed0000918
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG09:33978524..33980035
RNA-Seq ExpressionSed0000918
SyntenySed0000918
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575949.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.8e-7543.75Show/hide
Query:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV
        P++I+ + +++ LC   R    RE F  M    RR+LPDVISY+SLIHGFC GG WEEAK LFNEMVD G++PN VTFNV+MD+LCK GKVI+A E LEV
Subjt:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV

Query:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN------------------------------------------
        MIQRGNVP LFTYN LMDGFCL+ DL SA +LF  M S GCEP+VISYN+LINGYCKN                                          
Subjt:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE
         KANDLF+KMEENGCTPN+ITYNT++RGFY+SNKRE+V+ELLH+M +KNV+P+  TC+IVLDM+ KDE YR CLNLLP F VQE
Subjt:  GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE

KAG7014482.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-7543.75Show/hide
Query:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV
        P++I+ + +++ LC   R    RE F  M    RR+LPDVISY+SLIHGFC GG WEEAK LFNEMVD G++PN VTFNV+MD+LCK GKVI+A E LEV
Subjt:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV

Query:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN------------------------------------------
        MIQRGNVP LFTYN LMDGFCL+ DL SA +LF  M S GCEP+VISYN+LINGYCKN                                          
Subjt:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE
         KANDLF+KMEENGCTPN+ITYNT++RGFY+SNKRE+V+ELLH+M +KNV+P+  TC+IVLDM+ KDE YR CLNLLP F VQE
Subjt:  GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE

XP_022953742.1 putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucurbita moschata]7.7e-7644.01Show/hide
Query:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV
        P++I+ + +++ LC   R    RE F  M    RR+LPDVISY+SLIHGFC GG WEEAK LFNEMVD G++PN VTFNV+MD+LCK GKVI+A E LEV
Subjt:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV

Query:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN------------------------------------------
        MIQRGNVP LFTYN LMDGFCL+ DL SA +LF  M S GCEP+VISYN+LINGYCKN                                          
Subjt:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE
         KANDLF+KMEENGCTPN+ITYNT++RGFY+SNKRE+V+ELLH+M +KNV+P+  TC+IVLDM+ KDE YR CLNLLPTF VQE
Subjt:  GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE

XP_022992036.1 pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima]3.6e-7336.6Show/hide
Query:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVIL---------------------------------------------------------------
        M LAG+LP+ ITLNILLNCLCNVNR+ EG AAM  I+                                                               
Subjt:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVIL---------------------------------------------------------------

Query:  -------------------------------------------------RRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDM
                                                         RR+LPDVISY+SLIHGFC GG WEEAK LFNEMVD G++PN VTFNV+MD+
Subjt:  -------------------------------------------------RRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDM

Query:  LCKKGKVIKAKEFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN--------------------------
        LCK GKVI+A + LEVMIQRGNVP LF YN LMDGFCL+ DL+SA +LF  M S GCEP+VISYN+LINGYCKN                          
Subjt:  LCKKGKVIKAKEFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN--------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE
                         KANDLF+KMEENGCTPN+ITYNT++RGFY+SNKRE+V+ELLH+M  KNV+P+  TC+IVLDM+ +DE YR CLNLLPTF VQ+
Subjt:  ----------------GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE

XP_023548637.1 pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp. pepo]1.4e-7437.2Show/hide
Query:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVIL---------------------------------------------------------------
        M LAG+LP+ ITLNILLNCLCNVNR+ EG AAM  I+                                                               
Subjt:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVIL---------------------------------------------------------------

Query:  -------------------------------------------------RRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDM
                                                         RR+LPDVISY+SLIHGFC GG WEEAK LFNEMVD G++PN VTFNV+MD+
Subjt:  -------------------------------------------------RRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDM

Query:  LCKKGKVIKAKEFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN--------------------------
        LCK GKVI+A E LEVMIQRGN P LFTYN LMDGFCL+ DL SA +LF  M S GCEP+VISYN+LINGYCKN                          
Subjt:  LCKKGKVIKAKEFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN--------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE
                         KANDLF+KMEENGCTPN+ITYNT++RGFY+SNKRE+V+ELLH+M +KNV+P+  TC+IVLDM+ KDE YR CLNLLPTF VQE
Subjt:  ----------------GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE

TrEMBL top hitse value%identityAlignment
A0A1S4DYL6 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like9.5e-6439.02Show/hide
Query:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV
        P++   NI+++ LC V R     E F  M    + ++P+VISY+SLIHGFC    WEE+KRLF+EMVDQGV+P+ VTF+V++D LCK+GKVI+AK+  EV
Subjt:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV

Query:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGY---------------------------------------------
        MIQRG VP LF Y+ LM+GFC++GDL SA +LF  M S GCEPDVISY +LINGY                                             
Subjt:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGY---------------------------------------------

Query:  -------------------------CKNG-----------------------------------------------------------------------
                                 CKNG                                                                       
Subjt:  -------------------------CKNG-----------------------------------------------------------------------

Query:  --KANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQERQ
          KAN L QKME NGC PNIITYNT++RGFY+SNK ++V++LLH M +K+VLP+  TCSIV+DM+ KDE Y+ECL+LLP F VQ+ Q
Subjt:  --KANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQERQ

A0A5D3C8J0 Pentatricopeptide repeat-containing protein9.5e-6439.02Show/hide
Query:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV
        P++   NI+++ LC V R     E F  M    + ++P+VISY+SLIHGFC    WEE+KRLF+EMVDQGV+P+ VTF+V++D LCK+GKVI+AK+  EV
Subjt:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV

Query:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGY---------------------------------------------
        MIQRG VP LF Y+ LM+GFC++GDL SA +LF  M S GCEPDVISY +LINGY                                             
Subjt:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGY---------------------------------------------

Query:  -------------------------CKNG-----------------------------------------------------------------------
                                 CKNG                                                                       
Subjt:  -------------------------CKNG-----------------------------------------------------------------------

Query:  --KANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQERQ
          KAN L QKME NGC PNIITYNT++RGFY+SNK ++V++LLH M +K+VLP+  TCSIV+DM+ KDE Y+ECL+LLP F VQ+ Q
Subjt:  --KANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQERQ

A0A6J1DSW3 pentatricopeptide repeat-containing protein At1g63330-like2.1e-7136.65Show/hide
Query:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILRR-------------------------------------------------------------
        M LAGILP+ ITLNILLNCLCNVNRV EG AAM  I+RR                                                             
Subjt:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILRR-------------------------------------------------------------

Query:  ---------------------------------------------------VLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDM
                                                           +LPDVISY+SLIHGFC GG WEEAK LFNEMVD GV+PN+VTFNV+MDM
Subjt:  ---------------------------------------------------VLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDM

Query:  LCKKGKVIKAKEFLEVMIQRG-NVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN-------------------------
        LCK GKVI+AKE LE+M+Q G N P LFTYN LMDGFCL+GDL SA +LF  M + GCEP+VISYN+LINGYCKN                         
Subjt:  LCKKGKVIKAKEFLEVMIQRG-NVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN-------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRV
                           KA DLF+KMEENGCTPNIITYNT++RGFY++NK E+V+ELLH+M +KNVLP+  TC+IVLDM+ +DE Y+ECLNLLP F  
Subjt:  ------------------GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRV

Query:  QE
        QE
Subjt:  QE

A0A6J1GP31 putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial3.7e-7644.01Show/hide
Query:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV
        P++I+ + +++ LC   R    RE F  M    RR+LPDVISY+SLIHGFC GG WEEAK LFNEMVD G++PN VTFNV+MD+LCK GKVI+A E LEV
Subjt:  PDLITLNILLNCLCNVNR---VREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV

Query:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN------------------------------------------
        MIQRGNVP LFTYN LMDGFCL+ DL SA +LF  M S GCEP+VISYN+LINGYCKN                                          
Subjt:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE
         KANDLF+KMEENGCTPN+ITYNT++RGFY+SNKRE+V+ELLH+M +KNV+P+  TC+IVLDM+ KDE YR CLNLLPTF VQE
Subjt:  GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE

A0A6J1JSG4 pentatricopeptide repeat-containing protein At1g63330-like1.7e-7336.6Show/hide
Query:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVIL---------------------------------------------------------------
        M LAG+LP+ ITLNILLNCLCNVNR+ EG AAM  I+                                                               
Subjt:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVIL---------------------------------------------------------------

Query:  -------------------------------------------------RRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDM
                                                         RR+LPDVISY+SLIHGFC GG WEEAK LFNEMVD G++PN VTFNV+MD+
Subjt:  -------------------------------------------------RRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDM

Query:  LCKKGKVIKAKEFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN--------------------------
        LCK GKVI+A + LEVMIQRGNVP LF YN LMDGFCL+ DL+SA +LF  M S GCEP+VISYN+LINGYCKN                          
Subjt:  LCKKGKVIKAKEFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKN--------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE
                         KANDLF+KMEENGCTPN+ITYNT++RGFY+SNKRE+V+ELLH+M  KNV+P+  TC+IVLDM+ +DE YR CLNLLPTF VQ+
Subjt:  ----------------GKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE

SwissProt top hitse value%identityAlignment
Q3ECK2 Pentatricopeptide repeat-containing protein At1g62680, mitochondrial6.8e-4336.12Show/hide
Query:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILRR-VLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAK
        M+  G  PD++  N +++ LC   RV + F     I R+ + P+V++YT+L++G C    W +A RL ++M+ + + PN++T++ ++D   K GKV++AK
Subjt:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILRR-VLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAK

Query:  EFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNK
        E  E M++    P + TY+ L++G CL   +  AN +F  M S GC  DV+SYN LING+CK  +  D   LF++M + G   N +TYNT+I+GF+Q+  
Subjt:  EFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNK

Query:  REQVIELLHKMAQKNVLPNDYTCSIVL
         ++  E   +M    + P+ +T +I+L
Subjt:  REQVIELLHKMAQKNVLPNDYTCSIVL

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial3.4e-4235.44Show/hide
Query:  ILPDLITLNILLNCLCNVNRVREGFAAMTVI-LRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV
        I   ++  +I+++ LC      +  +    + ++ +  DV++Y+SLI G C  G W++  ++  EM+ + + P++VTF+ ++D+  K+GK+++AKE    
Subjt:  ILPDLITLNILLNCLCNVNRVREGFAAMTVI-LRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV

Query:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNKREQVI
        MI RG  P   TYN L+DGFC    L  AN +F  M S GCEPD+++Y++LIN YCK  + +D   LF+++   G  PN ITYNT++ GF QS K     
Subjt:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNKREQVI

Query:  ELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNL
        EL  +M  + V P+  T  I+LD +  +    + L +
Subjt:  ELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNL

Q9FLL3 Pentatricopeptide repeat-containing protein At5g41170, mitochondrial7.1e-4033.2Show/hide
Query:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILR-RVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAK
        M+  GI PD++    +++ LC    V    +    +    + PDV+ YTSL++G C  G W +A  L   M  + ++P+++TFN ++D   K+GK + A+
Subjt:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILR-RVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAK

Query:  EFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNK
        E    MI+    P++FTY  L++GFC+ G +  A  +F  M++ GC PDV++Y  LING+CK  K +D   +F +M + G T N ITY T+I+GF Q  K
Subjt:  EFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNK

Query:  REQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE
             E+   M  + V PN  T +++L  +  +   ++ L +    + +E
Subjt:  REQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic2.4e-4035.56Show/hide
Query:  GILPDLITLNILLNCLCNVNRVREGFAAMTVILRRVL-PDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLE
        G  PD  T N L+N LC    V+     M V+L+    PDV +Y S+I G C  G  +EA  + ++M+ +   PN VT+N ++  LCK+ +V +A E   
Subjt:  GILPDLITLNILLNCLCNVNRVREGFAAMTVILRRVL-PDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLE

Query:  VMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGK---ANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQV
        V+  +G +P + T+N L+ G CL  + + A +LF  M+S GCEPD  +YN+LI+  C  GK   A ++ ++ME +GC  ++ITYNT+I GF ++NK  + 
Subjt:  VMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGK---ANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQV

Query:  IELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLL
         E+  +M    V  N  T + ++D + K     +   L+
Subjt:  IELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLL

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial6.4e-4135.04Show/hide
Query:  DLITLNILLNCLCNVNRVREGFAAMTVI-LRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEVMIQ
        D +  +I+++ LC    +   F     + ++    D+I+Y +LI GFC  G W++  +L  +M+ + + PN+VTF+V++D   K+GK+ +A + L+ M+Q
Subjt:  DLITLNILLNCLCNVNRVREGFAAMTVI-LRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEVMIQ

Query:  RGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELL
        RG  P+  TYN L+DGFC    L+ A  +   M S GC+PD++++N+LINGYCK  + +D   LF++M   G   N +TYNT+++GF QS K E   +L 
Subjt:  RGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELL

Query:  HKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNL
         +M  + V P+  +  I+LD +  +    + L +
Subjt:  HKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNL

Arabidopsis top hitse value%identityAlignment
AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein4.5e-4235.04Show/hide
Query:  DLITLNILLNCLCNVNRVREGFAAMTVI-LRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEVMIQ
        D +  +I+++ LC    +   F     + ++    D+I+Y +LI GFC  G W++  +L  +M+ + + PN+VTF+V++D   K+GK+ +A + L+ M+Q
Subjt:  DLITLNILLNCLCNVNRVREGFAAMTVI-LRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEVMIQ

Query:  RGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELL
        RG  P+  TYN L+DGFC    L+ A  +   M S GC+PD++++N+LINGYCK  + +D   LF++M   G   N +TYNT+++GF QS K E   +L 
Subjt:  RGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELL

Query:  HKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNL
         +M  + V P+  +  I+LD +  +    + L +
Subjt:  HKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNL

AT1G62680.1 Pentatricopeptide repeat (PPR) superfamily protein4.8e-4436.12Show/hide
Query:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILRR-VLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAK
        M+  G  PD++  N +++ LC   RV + F     I R+ + P+V++YT+L++G C    W +A RL ++M+ + + PN++T++ ++D   K GKV++AK
Subjt:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILRR-VLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAK

Query:  EFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNK
        E  E M++    P + TY+ L++G CL   +  AN +F  M S GC  DV+SYN LING+CK  +  D   LF++M + G   N +TYNT+I+GF+Q+  
Subjt:  EFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNK

Query:  REQVIELLHKMAQKNVLPNDYTCSIVL
         ++  E   +M    + P+ +T +I+L
Subjt:  REQVIELLHKMAQKNVLPNDYTCSIVL

AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein2.4e-4335.44Show/hide
Query:  ILPDLITLNILLNCLCNVNRVREGFAAMTVI-LRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV
        I   ++  +I+++ LC      +  +    + ++ +  DV++Y+SLI G C  G W++  ++  EM+ + + P++VTF+ ++D+  K+GK+++AKE    
Subjt:  ILPDLITLNILLNCLCNVNRVREGFAAMTVI-LRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEV

Query:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNKREQVI
        MI RG  P   TYN L+DGFC    L  AN +F  M S GCEPD+++Y++LIN YCK  + +D   LF+++   G  PN ITYNT++ GF QS K     
Subjt:  MIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNKREQVI

Query:  ELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNL
        EL  +M  + V P+  T  I+LD +  +    + L +
Subjt:  ELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNL

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-4135.56Show/hide
Query:  GILPDLITLNILLNCLCNVNRVREGFAAMTVILRRVL-PDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLE
        G  PD  T N L+N LC    V+     M V+L+    PDV +Y S+I G C  G  +EA  + ++M+ +   PN VT+N ++  LCK+ +V +A E   
Subjt:  GILPDLITLNILLNCLCNVNRVREGFAAMTVILRRVL-PDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLE

Query:  VMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGK---ANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQV
        V+  +G +P + T+N L+ G CL  + + A +LF  M+S GCEPD  +YN+LI+  C  GK   A ++ ++ME +GC  ++ITYNT+I GF ++NK  + 
Subjt:  VMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGK---ANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQV

Query:  IELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLL
         E+  +M    V  N  T + ++D + K     +   L+
Subjt:  IELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLL

AT5G41170.1 Pentatricopeptide repeat (PPR-like) superfamily protein5.0e-4133.2Show/hide
Query:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILR-RVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAK
        M+  GI PD++    +++ LC    V    +    +    + PDV+ YTSL++G C  G W +A  L   M  + ++P+++TFN ++D   K+GK + A+
Subjt:  MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILR-RVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAK

Query:  EFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNK
        E    MI+    P++FTY  L++GFC+ G +  A  +F  M++ GC PDV++Y  LING+CK  K +D   +F +M + G T N ITY T+I+GF Q  K
Subjt:  EFLEVMIQRGNVPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKAND---LFQKMEENGCTPNIITYNTIIRGFYQSNK

Query:  REQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE
             E+   M  + V PN  T +++L  +  +   ++ L +    + +E
Subjt:  REQVIELLHKMAQKNVLPNDYTCSIVLDMVLKDENYRECLNLLPTFRVQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTAGCTGGAATTTTGCCTGATCTCATCACTCTTAATATTTTGCTTAATTGCCTTTGCAATGTCAATCGGGTTAGGGAAGGTTTTGCGGCCATGACAGTCATTCT
AAGGAGAGTGCTTCCTGATGTGATTTCTTATACCTCTTTGATTCATGGATTTTGTGGTGGTGGAAACTGGGAGGAGGCTAAACGTCTATTCAATGAGATGGTCGATCAGG
GTGTTCGACCCAATATGGTCACTTTTAATGTGATTATGGATATGCTCTGTAAGAAAGGAAAGGTTATCAAGGCTAAGGAATTTTTGGAGGTCATGATTCAGAGAGGTAAC
GTTCCTTCTTTGTTTACTTACAATATACTGATGGATGGATTCTGTTTGATTGGTGACTTAAAGAGTGCGAACGATTTGTTTGCTGGTATGAAAAGTAATGGGTGTGAACC
TGATGTGATTAGTTACAATTTGCTAATCAATGGGTACTGCAAAAATGGGAAGGCAAATGATTTGTTTCAAAAGATGGAAGAAAATGGTTGTACTCCTAATATAATTACTT
ATAATACAATCATAAGGGGTTTCTATCAGAGTAATAAACGAGAACAAGTGATTGAACTTTTGCATAAGATGGCTCAGAAAAATGTGTTGCCAAATGATTACACTTGCAGC
ATAGTCTTAGACATGGTTTTGAAGGATGAAAATTATCGAGAATGTCTGAACTTGCTTCCAACATTTCGAGTCCAAGAGCGTCAAACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTTAGCTGGAATTTTGCCTGATCTCATCACTCTTAATATTTTGCTTAATTGCCTTTGCAATGTCAATCGGGTTAGGGAAGGTTTTGCGGCCATGACAGTCATTCT
AAGGAGAGTGCTTCCTGATGTGATTTCTTATACCTCTTTGATTCATGGATTTTGTGGTGGTGGAAACTGGGAGGAGGCTAAACGTCTATTCAATGAGATGGTCGATCAGG
GTGTTCGACCCAATATGGTCACTTTTAATGTGATTATGGATATGCTCTGTAAGAAAGGAAAGGTTATCAAGGCTAAGGAATTTTTGGAGGTCATGATTCAGAGAGGTAAC
GTTCCTTCTTTGTTTACTTACAATATACTGATGGATGGATTCTGTTTGATTGGTGACTTAAAGAGTGCGAACGATTTGTTTGCTGGTATGAAAAGTAATGGGTGTGAACC
TGATGTGATTAGTTACAATTTGCTAATCAATGGGTACTGCAAAAATGGGAAGGCAAATGATTTGTTTCAAAAGATGGAAGAAAATGGTTGTACTCCTAATATAATTACTT
ATAATACAATCATAAGGGGTTTCTATCAGAGTAATAAACGAGAACAAGTGATTGAACTTTTGCATAAGATGGCTCAGAAAAATGTGTTGCCAAATGATTACACTTGCAGC
ATAGTCTTAGACATGGTTTTGAAGGATGAAAATTATCGAGAATGTCTGAACTTGCTTCCAACATTTCGAGTCCAAGAGCGTCAAACGTAA
Protein sequenceShow/hide protein sequence
MILAGILPDLITLNILLNCLCNVNRVREGFAAMTVILRRVLPDVISYTSLIHGFCGGGNWEEAKRLFNEMVDQGVRPNMVTFNVIMDMLCKKGKVIKAKEFLEVMIQRGN
VPSLFTYNILMDGFCLIGDLKSANDLFAGMKSNGCEPDVISYNLLINGYCKNGKANDLFQKMEENGCTPNIITYNTIIRGFYQSNKREQVIELLHKMAQKNVLPNDYTCS
IVLDMVLKDENYRECLNLLPTFRVQERQT