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Sed0000998 (gene) of Chayote v1 genome

Gene IDSed0000998
OrganismSechium edule (Chayote v1)
DescriptionTranscription factor bHLH35-like protein
Genome locationLG14:23513846..23515358
RNA-Seq ExpressionSed0000998
SyntenySed0000998
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034655.1 hypothetical protein SDJN02_04385, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-5568.48Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVST QK+F+S KKLRL  SL T+++ G+QS  FWNAVLF+HKLK KLE +EREYS+LL+MK+EYLNS+KQ  A KEV VEK+GE  +VKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD
        V++LE F+KM LNV++AKVSC+ECFSMEAIAVAED+Q +N+ D+ EAIN AIDGK L  N+ QK+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD

XP_022925942.1 uncharacterized protein LOC111433204 [Cucurbita moschata]3.9e-5568.48Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVST QK+F+S KKLRL  SL T+++ G+QS  FWNAVLF+HKLK KLE +EREYS+LL+MK+EYLNS+KQ  A KEV VEK+GE  +VKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD
        V++LE F+KM LNV++AKVSC+ECFSMEAIAVAED+Q +N+ D+ EAIN AIDGK L  N+ QK+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD

XP_022978770.1 uncharacterized protein LOC111478631 [Cucurbita maxima]1.3e-5569.09Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVST QK+F+S KKLRL  SL T+++ G+QS  FWNAVLF+HKLK KLE +EREYS+LL+MK+EYLNS+KQ  A KEV VEK+GE F+VKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD
        V++LE F+KM LNV++AKVSC+ECFSMEAIAVAED+Q +N+ D+ EAIN AIDGK L  N+ QK+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD

XP_023544520.1 uncharacterized protein LOC111804071 [Cucurbita pepo subsp. pepo]2.3e-5568.48Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVST QK+F+S KKLRL  SL T+++ G+QS  FWNAVLF+HKLK KLE +EREYS+LL+MK+EYLNS+KQ  A KEV VEK+GE F+VKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD
        V++LE F+KM LNV++AKVSC+ECFSMEAIAVAED+Q +N+ D+ EAIN AI+GK L  N+ QK+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD

XP_038893157.1 uncharacterized protein LOC120082020 [Benincasa hispida]5.4e-5773.49Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVSTLQK+F+S  KLRL  SLAT+E+  +Q   FWNAVLFIHKLK KLE +EREYS+LLAMK+EYLNSIKQF + KEV VEK GE FKVKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKDV
        VS+LE FEKM LNVVEA+VSC ECF MEAIAVAE+ +L+NV D+ EAINVAIDGKLL  N+  KD+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKDV

TrEMBL top hitse value%identityAlignment
A0A1S3B049 uncharacterized protein LOC1034844371.2e-5471.26Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVSTLQK+F+S  KLRL  SL T+E+ GRQ+  FWNAVLFIHKLK KLE +EREYS+LL MK+EYLNSIKQF + KEV VEK GE F+VKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAED-DQLVNVRDVIEAINVAIDGKLLEDNKDQKDV
        VS+LE FEKM LNVVEA+VSC ECF MEAIAVAED  QL+N+ D+ +AINVAID KLL  N+   D+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAED-DQLVNVRDVIEAINVAIDGKLLEDNKDQKDV

A0A5A7UBN8 Uncharacterized protein1.2e-5471.26Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVSTLQK+F+S  KLRL  SL T+E+ GRQ+  FWNAVLFIHKLK KLE +EREYS+LL MK+EYLNSIKQF + KEV VEK GE F+VKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAED-DQLVNVRDVIEAINVAIDGKLLEDNKDQKDV
        VS+LE FEKM LNVVEA+VSC ECF MEAIAVAED  QL+N+ D+ +AINVAID KLL  N+   D+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAED-DQLVNVRDVIEAINVAIDGKLLEDNKDQKDV

A0A6J1ED01 uncharacterized protein LOC1114332041.9e-5568.48Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVST QK+F+S KKLRL  SL T+++ G+QS  FWNAVLF+HKLK KLE +EREYS+LL+MK+EYLNS+KQ  A KEV VEK+GE  +VKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD
        V++LE F+KM LNV++AKVSC+ECFSMEAIAVAED+Q +N+ D+ EAIN AIDGK L  N+ QK+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD

A0A6J1IR65 uncharacterized protein LOC1114786316.4e-5669.09Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVST QK+F+S KKLRL  SL T+++ G+QS  FWNAVLF+HKLK KLE +EREYS+LL+MK+EYLNS+KQ  A KEV VEK+GE F+VKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD
        V++LE F+KM LNV++AKVSC+ECFSMEAIAVAED+Q +N+ D+ EAIN AIDGK L  N+ QK+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKD

E5GC31 Uncharacterized protein1.2e-5471.26Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL
        MVSTLQK+F+S  KLRL  SL T+E+ GRQ+  FWNAVLFIHKLK KLE +EREYS+LL MK+EYLNSIKQF + KEV VEK GE F+VKVRCEKGGDRL
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRL

Query:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAED-DQLVNVRDVIEAINVAIDGKLLEDNKDQKDV
        VS+LE FEKM LNVVEA+VSC ECF MEAIAVAED  QL+N+ D+ +AINVAID KLL  N+   D+
Subjt:  VSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAED-DQLVNVRDVIEAINVAIDGKLLEDNKDQKDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29270.1 unknown protein1.3e-1942.21Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFE-APGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDR
        MV++ QKK  S  K     +L  F+ +   QS     A+L+I  LK ++E ++REY DL   KKE   S+ QFQ   EV VEKIGE F+VK++  +G + 
Subjt:  MVSTLQKKFNSSKKLRLALSLATFE-APGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDR

Query:  LVSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAED-DQLVNVRDVIEAINVAI
        LV+ILE FE+M LNV +A+ SC + F+MEAI   +  D+L +V D+ + +  A+
Subjt:  LVSILEVFEKMRLNVVEAKVSCNECFSMEAIAVAED-DQLVNVRDVIEAINVAI

AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)9.3e-0731.17Show/hide
Query:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKG-GDR
        MVS  QK+ +  +K +L  S+    A    S    +A  +I KLK K+E   ++ +       E  +S         V VE + + F + V   K     
Subjt:  MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKG-GDR

Query:  LVSILEVFEKMRLNVVEAKVSCNECFSMEAIAVA-EDDQLVNVRDVIEAINVAI
        LVS+LE FE + LNV+EA+ SC + FS+ A+ +  ED + ++   V +A+  AI
Subjt:  LVSILEVFEKMRLNVVEAKVSCNECFSMEAIAVA-EDDQLVNVRDVIEAINVAI

AT3G56220.1 transcription regulators6.0e-0630.67Show/hide
Query:  MVSTLQKKFNS-SKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKE-------VNVEKIGENFKVKVR
        MVS   K+ +S  +K  L  S+    A    S    +A  +I KLK K+E +               N+    Q+ +E       V VE + + F +KV 
Subjt:  MVSTLQKKFNS-SKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKE-------VNVEKIGENFKVKVR

Query:  CEKG-GDRLVSILEVFEKMRLNVVEAKVSCNECFSMEAIAVA--EDDQLVNVRDVIEAINVAI
          K     LV +LE FE + L+VVEA+VSC + FS+ AI  +  +D   ++   V +A+  AI
Subjt:  CEKG-GDRLVSILEVFEKMRLNVVEAKVSCNECFSMEAIAVA--EDDQLVNVRDVIEAINVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTACATTGCAAAAGAAATTCAACTCATCCAAGAAGCTACGCCTTGCTCTTTCTCTTGCCACCTTTGAAGCCCCTGGAAGACAAAGCAGAGCATTCTGGAATGC
AGTTCTCTTCATTCATAAGCTCAAGAACAAGCTGGAAACAGTGGAAAGAGAATATTCAGATCTGTTAGCCATGAAAAAAGAATACTTGAACTCAATAAAGCAATTCCAAG
CCCTCAAGGAAGTGAATGTGGAGAAAATTGGAGAAAATTTTAAAGTGAAAGTGAGATGTGAAAAGGGAGGGGACAGATTGGTATCAATATTGGAAGTATTTGAGAAAATG
AGACTTAATGTTGTGGAAGCTAAAGTTTCATGTAATGAATGTTTTTCCATGGAGGCCATTGCTGTTGCTGAAGATGATCAATTGGTTAATGTAAGAGATGTAATTGAAGC
TATTAATGTTGCCATTGATGGGAAATTATTAGAGGATAATAAGGATCAGAAAGATGTTGAAATTTAG
mRNA sequenceShow/hide mRNA sequence
GGGTTTTCTCTGATCTCAAGTTCACATGAGAACAAAAGGAAAGTAGAATAGCAGCTTTTTATGCTATAAAAAGGCAGACCCTTAATTTCAGATCACCATATTCTTCACTA
AACTTATCTCAAATTGGGAACCAAATTTGAGCTGAGAAAGATGGTTTCTACATTGCAAAAGAAATTCAACTCATCCAAGAAGCTACGCCTTGCTCTTTCTCTTGCCACCT
TTGAAGCCCCTGGAAGACAAAGCAGAGCATTCTGGAATGCAGTTCTCTTCATTCATAAGCTCAAGAACAAGCTGGAAACAGTGGAAAGAGAATATTCAGATCTGTTAGCC
ATGAAAAAAGAATACTTGAACTCAATAAAGCAATTCCAAGCCCTCAAGGAAGTGAATGTGGAGAAAATTGGAGAAAATTTTAAAGTGAAAGTGAGATGTGAAAAGGGAGG
GGACAGATTGGTATCAATATTGGAAGTATTTGAGAAAATGAGACTTAATGTTGTGGAAGCTAAAGTTTCATGTAATGAATGTTTTTCCATGGAGGCCATTGCTGTTGCTG
AAGATGATCAATTGGTTAATGTAAGAGATGTAATTGAAGCTATTAATGTTGCCATTGATGGGAAATTATTAGAGGATAATAAGGATCAGAAAGATGTTGAAATTTAGCCA
GTTTTTTAACCTATCAGTTGAATGCAAATGTTTGTTGGTACTCTCTCTTGTATTTTTCTTCCTTTTTATTATACTTTTTTTTCATTGCGAGTGTTCGAGTTACTTACTAT
GTTGACTACTATGAATTCGGC
Protein sequenceShow/hide protein sequence
MVSTLQKKFNSSKKLRLALSLATFEAPGRQSRAFWNAVLFIHKLKNKLETVEREYSDLLAMKKEYLNSIKQFQALKEVNVEKIGENFKVKVRCEKGGDRLVSILEVFEKM
RLNVVEAKVSCNECFSMEAIAVAEDDQLVNVRDVIEAINVAIDGKLLEDNKDQKDVEI