; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001060 (gene) of Chayote v1 genome

Gene IDSed0001060
OrganismSechium edule (Chayote v1)
DescriptionPlant transposase
Genome locationLG12:24734693..24737595
RNA-Seq ExpressionSed0001060
SyntenySed0001060
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032201.1 Plant transposase [Cucumis melo var. makuwa]3.8e-7063.03Show/hide
Query:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE
        +S+Q      +WQKK+ FQKMGGLWRASKSRLVSKI  AS+D EL+ LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSR+GYARL E
Subjt:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE

Query:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL
        D+K SSST ITRV VWT+AH KKDG P+NS VADT                 +++I QN       + S+++ DDA+S+VLGPD+ ++RGLGFGVT SK+
Subjt:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL

Query:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        S S  KDKTI SLE KC+NLTSDV+ LK VV+SLLKDK
Subjt:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

KAA0042856.1 Plant transposase [Cucumis melo var. makuwa]1.9e-6962.61Show/hide
Query:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE
        +S+Q      +WQKK+ FQKMGGLWRASKSRLVSKI  AS+D EL+ LKPDNI+SMHDWND IK KTSA FKAKSK F+++K+KQLPHTCSR+GYARL E
Subjt:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE

Query:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL
        D+K SSST ITRV VWT+AH KKDG P+NS VADT                 +++I QN       + S+++ DDA+S+VLGPD+ ++RGLGFGVT SK+
Subjt:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL

Query:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        S S  KDKTI SLE KC+NLTSDV+ LK VV+SLLKDK
Subjt:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

KAA0051001.1 Plant transposase [Cucumis melo var. makuwa]6.1e-6861.76Show/hide
Query:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE
        +S+Q      +WQKK+ FQKMGGLWRASKSRLVSKI  AS+D EL  LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCS +GYARL E
Subjt:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE

Query:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL
        D+K SSST ITRV VWT+AH KKDG P+NS VADT                 +++I QN       + S+++ DDA+S+VLGPD+ ++RGLGF VT SK+
Subjt:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL

Query:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        S S  KDKTI SLE KC+NLT DV+ LK VV+SLLKDK
Subjt:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

KAA0057491.1 Plant transposase [Cucumis melo var. makuwa]1.4e-6962.18Show/hide
Query:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE
        +S+Q      +WQKK+ FQKMGGLWRASKSRLVSKI  AS+D E + LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSR+GYARL E
Subjt:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE

Query:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL
        D+K SSST+ITRV VWT+AH KKDG P+NS VADT                 +++I QN       + S+++ DDA+S+VLGPD+ ++RGLGFGVT SK+
Subjt:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL

Query:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        S S  KDKTI SLE KC+NLTSDV+ LK VV+S LKDK
Subjt:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

TYK14770.1 uncharacterized protein E5676_scaffold1610G00080 [Cucumis melo var. makuwa]8.5e-5461.86Show/hide
Query:  DWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNI
        +W+KK+ FQKMGGLWRASKSRLVSKI  AS+D EL+ +KPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSRKGYARL ED+K+SSST I
Subjt:  DWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNI

Query:  TRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKLSIST
        TRV VWT+ H KKDG P+NS VADT                 +E+I QN         S+++ DDA+S+VLG D+G++R LGFGVT SK S++T
Subjt:  TRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKLSIST

TrEMBL top hitse value%identityAlignment
A0A5A7SRN7 Plant transposase1.8e-7063.03Show/hide
Query:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE
        +S+Q      +WQKK+ FQKMGGLWRASKSRLVSKI  AS+D EL+ LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSR+GYARL E
Subjt:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE

Query:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL
        D+K SSST ITRV VWT+AH KKDG P+NS VADT                 +++I QN       + S+++ DDA+S+VLGPD+ ++RGLGFGVT SK+
Subjt:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL

Query:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        S S  KDKTI SLE KC+NLTSDV+ LK VV+SLLKDK
Subjt:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

A0A5A7TLJ2 Plant transposase9.2e-7062.61Show/hide
Query:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE
        +S+Q      +WQKK+ FQKMGGLWRASKSRLVSKI  AS+D EL+ LKPDNI+SMHDWND IK KTSA FKAKSK F+++K+KQLPHTCSR+GYARL E
Subjt:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE

Query:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL
        D+K SSST ITRV VWT+AH KKDG P+NS VADT                 +++I QN       + S+++ DDA+S+VLGPD+ ++RGLGFGVT SK+
Subjt:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL

Query:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        S S  KDKTI SLE KC+NLTSDV+ LK VV+SLLKDK
Subjt:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

A0A5A7UBP2 Plant transposase2.9e-6861.76Show/hide
Query:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE
        +S+Q      +WQKK+ FQKMGGLWRASKSRLVSKI  AS+D EL  LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCS +GYARL E
Subjt:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE

Query:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL
        D+K SSST ITRV VWT+AH KKDG P+NS VADT                 +++I QN       + S+++ DDA+S+VLGPD+ ++RGLGF VT SK+
Subjt:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL

Query:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        S S  KDKTI SLE KC+NLT DV+ LK VV+SLLKDK
Subjt:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

A0A5A7UVF2 Plant transposase7.0e-7062.18Show/hide
Query:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE
        +S+Q      +WQKK+ FQKMGGLWRASKSRLVSKI  AS+D E + LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSR+GYARL E
Subjt:  NSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTE

Query:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL
        D+K SSST+ITRV VWT+AH KKDG P+NS VADT                 +++I QN       + S+++ DDA+S+VLGPD+ ++RGLGFGVT SK+
Subjt:  DMKSSSSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKL

Query:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK
        S S  KDKTI SLE KC+NLTSDV+ LK VV+S LKDK
Subjt:  SISTIKDKTIASLENKCNNLTSDVNVLKEVVSSLLKDK

A0A5D3CTK4 Transposase_23 domain-containing protein4.1e-5461.86Show/hide
Query:  DWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNI
        +W+KK+ FQKMGGLWRASKSRLVSKI  AS+D EL+ +KPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSRKGYARL ED+K+SSST I
Subjt:  DWQKKYFFQKMGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNI

Query:  TRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKLSIST
        TRV VWT+ H KKDG P+NS VADT                 +E+I QN         S+++ DDA+S+VLG D+G++R LGFGVT SK S++T
Subjt:  TRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKLSIST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAAGTTGGAAGAAACTCTCTACAAGACATAAAGAAGTATTATGATTGGCAAAAAAAATACTTTTTTCAAAAGATGGGTGGGTTGTGGAGAGCAAGTAAATCACG
CTTGGTGAGTAAGATTCGAAGTGCTTCCCACGATGAGTTGGATACATTAAAGCCCGATAATATTACTTCAATGCATGATTGGAACGACTTAATCAAAGATAAAACAAGTG
CACAGTTTAAGGCAAAAAGCAAAAAATTTCAAGAGATCAAGAAAAAACAACTTCCTCACACATGTAGTCGTAAAGGCTATGCTCGACTGACTGAAGACATGAAAAGTAGT
TCATCAACTAATATTACACGAGTAATGGTTTGGACAAGGGCACATACGAAGAAAGATGGACAACCTGTTAACTCACTAGTTGCAGACACAATGTTAGAAGGTTGGGTTCG
ACATGAAAATGTGAGTGTTGGTGTCATTATAATTGAGCAAATCTCACAAAATGTAAGTAATGAAGAAATGACGTCTCATTCAACTAATGTGGCTGATGATGCATTAAGTA
AAGTATTGGGTCCTGATCGTGGTCATATACGAGGATTAGGATTTGGAGTAACCAAGTCGAAGTTGTCCATATCAACTATAAAAGATAAAACTATTGCATCGCTTGAAAAT
AAATGCAATAATCTAACATCGGATGTGAATGTGTTGAAGGAAGTAGTATCATCTTTATTGAAGGACAAGTTACATATGGAAAGTATCTTTAAGGATATTGAATTCGAAAT
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAAGTTGGAAGAAACTCTCTACAAGACATAAAGAAGTATTATGATTGGCAAAAAAAATACTTTTTTCAAAAGATGGGTGGGTTGTGGAGAGCAAGTAAATCACG
CTTGGTGAGTAAGATTCGAAGTGCTTCCCACGATGAGTTGGATACATTAAAGCCCGATAATATTACTTCAATGCATGATTGGAACGACTTAATCAAAGATAAAACAAGTG
CACAGTTTAAGGCAAAAAGCAAAAAATTTCAAGAGATCAAGAAAAAACAACTTCCTCACACATGTAGTCGTAAAGGCTATGCTCGACTGACTGAAGACATGAAAAGTAGT
TCATCAACTAATATTACACGAGTAATGGTTTGGACAAGGGCACATACGAAGAAAGATGGACAACCTGTTAACTCACTAGTTGCAGACACAATGTTAGAAGGTTGGGTTCG
ACATGAAAATGTGAGTGTTGGTGTCATTATAATTGAGCAAATCTCACAAAATGTAAGTAATGAAGAAATGACGTCTCATTCAACTAATGTGGCTGATGATGCATTAAGTA
AAGTATTGGGTCCTGATCGTGGTCATATACGAGGATTAGGATTTGGAGTAACCAAGTCGAAGTTGTCCATATCAACTATAAAAGATAAAACTATTGCATCGCTTGAAAAT
AAATGCAATAATCTAACATCGGATGTGAATGTGTTGAAGGAAGTAGTATCATCTTTATTGAAGGACAAGTTACATATGGAAAGTATCTTTAAGGATATTGAATTCGAAAT
TTGA
Protein sequenceShow/hide protein sequence
MLKVGRNSLQDIKKYYDWQKKYFFQKMGGLWRASKSRLVSKIRSASHDELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSS
SSTNITRVMVWTRAHTKKDGQPVNSLVADTMLEGWVRHENVSVGVIIIEQISQNVSNEEMTSHSTNVADDALSKVLGPDRGHIRGLGFGVTKSKLSISTIKDKTIASLEN
KCNNLTSDVNVLKEVVSSLLKDKLHMESIFKDIEFEI