; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001062 (gene) of Chayote v1 genome

Gene IDSed0001062
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG12:31375263..31375796
RNA-Seq ExpressionSed0001062
SyntenySed0001062
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN63795.1 hypothetical protein Csa_013677 [Cucumis sativus]2.5e-5675.95Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLK-----PNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRP---EEEEEV
        M FSTP+ PP P SG  AKT ST L  SV AL ALCAKKA  +T KLK      +P HPSPRSPL RPKKMLKTISQSAM LVHKK+TGRP   EEEEE 
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLK-----PNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRP---EEEEEV

Query:  EEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK
        EE+WG GGVWQRGILMGDKCQPLDF GAIYYDSNG KM+EPPLRSPRASPLPGYL+RK
Subjt:  EEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK

TYK28394.1 hypothetical protein E5676_scaffold629G00220 [Cucumis melo var. makuwa]1.5e-5676.1Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKL--KPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEE---
        M FSTPE PP P SG +A T ST L RS+TAL ALCAKKA  +T KL  KP+  HPSPRSPL RPKKMLKTISQSAM LVHKK+TGR EEEEE EEE   
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKL--KPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEE---

Query:  ----WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK
            WG GGVWQRGILMGDKCQPLDF GAIYYDSNG+KM+EPPLRSPRASPLPGYL+RK
Subjt:  ----WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK

XP_022973902.1 uncharacterized protein LOC111472519 [Cucurbita maxima]5.8e-4567.72Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTG----RPEEEEEVEE-E
        MA  TPERPP   S T   +  T LLRSV  LV LCAKKA  +T KLK     PSP + L RPK MLKTIS SAM L  KKKT     RPEEE++ EE E
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTG----RPEEEEEVEE-E

Query:  WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA
        WG  GVWQRGILMGDKCQPLDFPG IYYDSNGNK+NE P RSPRASPLPGYL+RKP+A
Subjt:  WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA

XP_023531310.1 uncharacterized protein LOC111793589 [Cucurbita pepo subsp. pepo]1.2e-4568.35Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTG----RPEEEEEVEE-E
        MA STPERPP   S T   +  T LLRSV  LV LCAKKA  VT KLK     PSP + L RPK MLKT+S SAM L  KKKT     RPEEE++ EE E
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTG----RPEEEEEVEE-E

Query:  WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA
        WG  GVWQRGILMGDKCQPLDFPG IYYDSNGNK+NE P RSPRASPLPGYL+RKP+A
Subjt:  WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA

XP_038879173.1 uncharacterized protein LOC120071149 [Benincasa hispida]6.2e-5577.07Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLK-----PNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEE-EVEE
        M FSTPE P    S TAAKT ST L RSVTAL   CAKKA  VT KLK      +P HPSP+SPL  PKKMLKTISQSAM LV KKKTGR EEEE E EE
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLK-----PNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEE-EVEE

Query:  EWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKP
        EWG GGVWQRGILMGDKCQPL+F GAIYYDSNGNKMNEPPLRSPRASPLPGYL+RKP
Subjt:  EWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKP

TrEMBL top hitse value%identityAlignment
A0A0A0LPH9 Uncharacterized protein1.2e-5675.95Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLK-----PNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRP---EEEEEV
        M FSTP+ PP P SG  AKT ST L  SV AL ALCAKKA  +T KLK      +P HPSPRSPL RPKKMLKTISQSAM LVHKK+TGRP   EEEEE 
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLK-----PNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRP---EEEEEV

Query:  EEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK
        EE+WG GGVWQRGILMGDKCQPLDF GAIYYDSNG KM+EPPLRSPRASPLPGYL+RK
Subjt:  EEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK

A0A5D3DXW4 Uncharacterized protein7.2e-5776.1Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKL--KPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEE---
        M FSTPE PP P SG +A T ST L RS+TAL ALCAKKA  +T KL  KP+  HPSPRSPL RPKKMLKTISQSAM LVHKK+TGR EEEEE EEE   
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKL--KPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEE---

Query:  ----WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK
            WG GGVWQRGILMGDKCQPLDF GAIYYDSNG+KM+EPPLRSPRASPLPGYL+RK
Subjt:  ----WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK

A0A6J1C108 uncharacterized protein LOC1110073693.8e-4264Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEEWGHGG
        M FST ER P   SG AAK+ ST LL S+TAL       A +++ KL+     PSPRSPL RPK MLKTISQSA+ LVHKKK+   ++ +E EEEWGHGG
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEEWGHGG

Query:  VWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK
        VWQR ILMGDKCQPLDF GAIYYD+ GNKM++ P RSPRASPLP YL+ K
Subjt:  VWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRK

A0A6J1EZ09 uncharacterized protein LOC1114408462.4e-4466.46Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTG----RPE-EEEEVEEE
        MA STPERPP   S T      T LLRSV  LV LCAKKA  VT KLK     PSP + L RPK +LKT+S SAM L  KKKT     RPE +++E E+E
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTG----RPE-EEEEVEEE

Query:  WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA
        WG  GVWQRGILMGDKCQPLDFPG IYYDSNGNK+NE P RSPRASPLPGYL+RKP+A
Subjt:  WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA

A0A6J1I8S7 uncharacterized protein LOC1114725192.8e-4567.72Show/hide
Query:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTG----RPEEEEEVEE-E
        MA  TPERPP   S T   +  T LLRSV  LV LCAKKA  +T KLK     PSP + L RPK MLKTIS SAM L  KKKT     RPEEE++ EE E
Subjt:  MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTG----RPEEEEEVEE-E

Query:  WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA
        WG  GVWQRGILMGDKCQPLDFPG IYYDSNGNK+NE P RSPRASPLPGYL+RKP+A
Subjt:  WGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein4.5e-1940.96Show/hide
Query:  STPERPPPPTSGTAAKTSSTRLLRS-VTALVALCAKKAGQVTNKLKP-------------------NPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKT
        STPE    P        S  RL  S + +++ LCA+ A +++ KLK                    N    S  SP  RPK++  T+S  AM +V +K  
Subjt:  STPERPPPPTSGTAAKTSSTRLLRS-VTALVALCAKKAGQVTNKLKP-------------------NPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKT

Query:  GRPEEEEEVEEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVR
          PEE+    EE    G+WQR ILMG KC+PLDF G IYYDSNG  +NE P RSPR +PLP Y  R
Subjt:  GRPEEEEEVEEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVR

AT1G71740.1 unknown protein1.8e-0448.72Show/hide
Query:  GGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRS
        G +WQ+ ILMG KCQ  DF G I YD++G  +  PP ++
Subjt:  GGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRS

AT3G14760.1 unknown protein5.3e-0450Show/hide
Query:  VWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLR
        VWQR ILMG+KC+   F G I YD  G+  + P L+
Subjt:  VWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLR

AT3G18560.1 unknown protein3.9e-1534.83Show/hide
Query:  ERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGH---------PSPR-----------------------SPL-TRPKKMLKTISQS
        ER  P    +A K  S   L    +L+ LCA+ A +V+ KLKP              SP+                       SP+  RPK++  T+S  
Subjt:  ERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGH---------PSPR-----------------------SPL-TRPKKMLKTISQS

Query:  AMGLVHKKK-------TGRPEEEEEVEEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLP
        AM +V +K        T +   E  +EE+    GVWQR ILMG KC+PLD+ G IYYD +G+++ + P RSPRAS +P
Subjt:  AMGLVHKKK-------TGRPEEEEEVEEEWGHGGVWQRGILMGDKCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCTCCACGCCGGAACGTCCTCCGCCACCCACCTCCGGCACGGCGGCCAAGACCTCATCCACCCGCCTGCTCCGGTCCGTCACAGCTCTTGTCGCTCTCTGCGC
CAAAAAAGCCGGCCAAGTCACCAATAAGCTCAAGCCGAACCCGGGTCACCCGAGTCCGAGGTCGCCTCTGACTCGGCCGAAGAAGATGCTGAAAACCATCAGCCAATCGG
CGATGGGTCTGGTTCACAAGAAAAAGACCGGCCGACCGGAGGAGGAGGAGGAAGTGGAAGAAGAGTGGGGCCATGGTGGAGTATGGCAGAGGGGGATCTTGATGGGTGAC
AAATGCCAGCCGTTGGATTTTCCGGGTGCAATTTATTACGATAGTAACGGCAACAAGATGAACGAGCCCCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCT
TGTCAGAAAACCTGATGCCTTCACCGTCCCAAAACAGTGA
mRNA sequenceShow/hide mRNA sequence
ACCCCACAATTCTCCCTAAATTAAATATGGCCTTCTCCACGCCGGAACGTCCTCCGCCACCCACCTCCGGCACGGCGGCCAAGACCTCATCCACCCGCCTGCTCCGGTCC
GTCACAGCTCTTGTCGCTCTCTGCGCCAAAAAAGCCGGCCAAGTCACCAATAAGCTCAAGCCGAACCCGGGTCACCCGAGTCCGAGGTCGCCTCTGACTCGGCCGAAGAA
GATGCTGAAAACCATCAGCCAATCGGCGATGGGTCTGGTTCACAAGAAAAAGACCGGCCGACCGGAGGAGGAGGAGGAAGTGGAAGAAGAGTGGGGCCATGGTGGAGTAT
GGCAGAGGGGGATCTTGATGGGTGACAAATGCCAGCCGTTGGATTTTCCGGGTGCAATTTATTACGATAGTAACGGCAACAAGATGAACGAGCCCCCTCTCCGTTCGCCA
CGTGCCAGTCCTTTACCCGGTTACCTTGTCAGAAAACCTGATGCCTTCACCGTCCCAAAACAGTGATTTTTTTTTTGTTTTACTTTTACCCGGT
Protein sequenceShow/hide protein sequence
MAFSTPERPPPPTSGTAAKTSSTRLLRSVTALVALCAKKAGQVTNKLKPNPGHPSPRSPLTRPKKMLKTISQSAMGLVHKKKTGRPEEEEEVEEEWGHGGVWQRGILMGD
KCQPLDFPGAIYYDSNGNKMNEPPLRSPRASPLPGYLVRKPDAFTVPKQ