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Sed0001091 (gene) of Chayote v1 genome

Gene IDSed0001091
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 17-like
Genome locationLG11:30306491..30307179
RNA-Seq ExpressionSed0001091
SyntenySed0001091
Gene Ontology termsGO:0048731 - system development (biological process)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601877.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1762.79Show/hide
Query:  ATATATNAALLLFFWVILLLAPASLCLHQPPP---SRKLVRLSTAALPHAPPPAELLGRR-TASTGAAAYGDDKRLIHTGPNPLHN
        A+A  T  A LLFFWV+L+  P +LCLH PPP   SRKLV  STA+L HA  P ELL  R T++  AA Y DDKRLIHTGPNPLHN
Subjt:  ATATATNAALLLFFWVILLLAPASLCLHQPPP---SRKLVRLSTAALPHAPPPAELLGRR-TASTGAAAYGDDKRLIHTGPNPLHN
KAG7016766.1 hypothetical protein SDJN02_21876, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2064Show/hide
Query:  LRTQPCRRRHAGATATATNAALLLFFWVILLLAPA--SLCLHQPPPSRKLVRLSTAALPHAPP---PAELLGRRTASTG-AAAYGDDKRLIHTGPNPLHN
        +RT  C R  AGAT   T  AL+LF WV+L+LAPA  +LC   PP  RKLVR STA+  HAPP   PAELL RR +S G AAAYGD+KRLIHTGPNPLHN
Subjt:  LRTQPCRRRHAGATATATNAALLLFFWVILLLAPA--SLCLHQPPPSRKLVRLSTAALPHAPP---PAELLGRRTASTG-AAAYGDDKRLIHTGPNPLHN
KAG7032578.1 hypothetical protein SDJN02_06627, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-1763.22Show/hide
Query:  ATATATNAALLLFFWVILLLAPASLCLHQPPP---SRKLVRLSTAALPHAPPPAELLGRRTASTGAAA--YGDDKRLIHTGPNPLHN
        A+A  T  A LLFFWV+L+  P +LCLH PPP   SRKLV  STA+L HA  P ELL  R  S  AAA  Y DDKRLIHTGPNPLHN
Subjt:  ATATATNAALLLFFWVILLLAPASLCLHQPPP---SRKLVRLSTAALPHAPPPAELLGRRTASTGAAA--YGDDKRLIHTGPNPLHN
XP_008437694.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 17-like [Cucumis melo]3.1e-1767.07Show/hide
Query:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
        ALLLFFWV+L+LAP +LCLH    PPPSRKL R STA+  HAPP     PAELL RR     A+AY +DKRLIHTGPNPLHN
Subjt:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
XP_011656246.1 CLAVATA3/ESR (CLE)-related protein 17 [Cucumis sativus]7.0e-1763.41Show/hide
Query:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
        AL LFFWV+L+ AP +LCLH    PPPSRKL R STA   HAPP     PAEL  R  ++  AAAYG++KRLIHTGPNPLHN
Subjt:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
TrEMBL top hitse value%identityAlignment
A0A067FB56 Uncharacterized protein (Fragment)2.3e-0541Show/hide
Query:  RRRHAGATATATNAALLLFFWVILLLAPASL--CLHQPP-------PSRKLVRLSTAALPHAPPPA---ELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
        RRR AGA A +       FFWVIL+ +   L   LH           +RK    +T +  HAPPP+    L+     + G++ Y DDKR+IHTGPNPLHN
Subjt:  RRRHAGATATATNAALLLFFWVILLLAPASL--CLHQPP-------PSRKLVRLSTAALPHAPPPA---ELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
A0A0A0KSY2 Uncharacterized protein3.4e-1763.41Show/hide
Query:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
        AL LFFWV+L+ AP +LCLH    PPPSRKL R STA   HAPP     PAEL  R  ++  AAAYG++KRLIHTGPNPLHN
Subjt:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
A0A1S3AUM2 CLAVATA3/ESR (CLE)-related protein 17-like1.5e-1767.07Show/hide
Query:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
        ALLLFFWV+L+LAP +LCLH    PPPSRKL R STA+  HAPP     PAELL RR     A+AY +DKRLIHTGPNPLHN
Subjt:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
A0A2H5Q2V2 Uncharacterized protein1.7e-0541Show/hide
Query:  RRRHAGATATATNAALLLFFWVILLLAPASL--CLHQPP-------PSRKLVRLSTAALPHAPPPA---ELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
        RRR AGA A +       FFWVIL+ +   L   LH           +RK   ++T +  HAPPP+    L+     + G++ Y DDKR+IHTGPNPLHN
Subjt:  RRRHAGATATATNAALLLFFWVILLLAPASL--CLHQPP-------PSRKLVRLSTAALPHAPPPA---ELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
A0A5A7TY55 CLAVATA3/ESR (CLE)-related protein 17-like1.5e-1767.07Show/hide
Query:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
        ALLLFFWV+L+LAP +LCLH    PPPSRKL R STA+  HAPP     PAELL RR     A+AY +DKRLIHTGPNPLHN
Subjt:  ALLLFFWVILLLAPASLCLH---QPPPSRKLVRLSTAALPHAPP-----PAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN
SwissProt top hitse value%identityAlignment
Q8L9H6 CLAVATA3/ESR (CLE)-related protein 172.4e-0450Show/hide
Query:  RLSTAALPHAPPPAELLGRRTAS-----TGAAAYGDDKRLIHTGPNPLHN
        RL   A P  PPP + L   TA      +    YGDDKR++HTGPNPLHN
Subjt:  RLSTAALPHAPPPAELLGRRTAS-----TGAAAYGDDKRLIHTGPNPLHN
Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 171.7e-0550Show/hide
Query:  RLSTAALPHAPPPAELLGRRTAS-----TGAAAYGDDKRLIHTGPNPLHN
        RL   A P  PPP + L   TA      +    YGDDKR++HTGPNPLHN
Subjt:  RLSTAALPHAPPPAELLGRRTAS-----TGAAAYGDDKRLIHTGPNPLHN
AT1G70895.2 CLAVATA3/ESR-RELATED 171.7e-0550Show/hide
Query:  RLSTAALPHAPPPAELLGRRTAS-----TGAAAYGDDKRLIHTGPNPLHN
        RL   A P  PPP + L   TA      +    YGDDKR++HTGPNPLHN
Subjt:  RLSTAALPHAPPPAELLGRRTAS-----TGAAAYGDDKRLIHTGPNPLHN
AT2G01505.1 CLAVATA3/ESR-RELATED 169.5e-0434.02Show/hide
Query:  RRRHAGATATATNAALLLFFWVILLLAPASLCL-------HQPPPSRKLVRLSTAALPHAPPPAELL--GRRTASTGAAAYGDDKRLIHTGPNPLHN
        +RR   A  T+T     +FF  I + A   +         H P   RK       A   AP         RR        Y DDKRL+HTGPNPLHN
Subjt:  RRRHAGATATATNAALLLFFWVILLLAPASLCL-------HQPPPSRKLVRLSTAALPHAPPPAELL--GRRTASTGAAAYGDDKRLIHTGPNPLHN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTACTACGAACCCAACCCTGCCGTCGCCGCCACGCCGGAGCCACCGCCACCGCCACAAACGCCGCGCTTCTTCTTTTCTTCTGGGTCATTCTCCTTTTAGCTCC
GGCCAGTCTCTGCCTCCACCAACCGCCGCCGTCGAGAAAATTAGTCCGACTCTCCACGGCGGCGCTTCCGCATGCACCGCCACCAGCTGAGCTCCTCGGCCGCCGTACCG
CATCCACCGGCGCCGCCGCGTACGGCGACGACAAGCGGCTAATCCATACGGGTCCGAATCCTCTTCACAACTAA
mRNA sequenceShow/hide mRNA sequence
AGAATGTCTAAATAAAAACTTCAAATTTTGGCAAATTTTTTTCAAAAACATTACAGCCTTAACATTATGTGCTTAAACCCATAACACATTCACCAAAAAAAAAAAATCTT
TCCTTTTTTTTCCCTTTCATTTTCTCGGGAAACAAACACTCCCAAAAACCCACCACCGTTTCACGGCGACGGAATGACATTACTACGAACCCAACCCTGCCGTCGCCGCC
ACGCCGGAGCCACCGCCACCGCCACAAACGCCGCGCTTCTTCTTTTCTTCTGGGTCATTCTCCTTTTAGCTCCGGCCAGTCTCTGCCTCCACCAACCGCCGCCGTCGAGA
AAATTAGTCCGACTCTCCACGGCGGCGCTTCCGCATGCACCGCCACCAGCTGAGCTCCTCGGCCGCCGTACCGCATCCACCGGCGCCGCCGCGTACGGCGACGACAAGCG
GCTAATCCATACGGGTCCGAATCCTCTTCACAACTAAATTTCATCAATTTTTTTTTTTTGTTAAATTTATGAATATTTTAGAAGATGGGTAGATTTTAGATCTTGGTGTT
GAACAACTTTTTTGGGTTTTTTTTTCTTTTAATTTTGTTGTGGAGAAGAAATTAGAGCATAAAAAATTAGCTTTCTGAGAGAAATTAATTTTGAAGGCTAATTGTTTGAT
GCTCTTTGTTTCTTTCTATCTAATCCTAC
Protein sequenceShow/hide protein sequence
MTLLRTQPCRRRHAGATATATNAALLLFFWVILLLAPASLCLHQPPPSRKLVRLSTAALPHAPPPAELLGRRTASTGAAAYGDDKRLIHTGPNPLHN