; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001131 (gene) of Chayote v1 genome

Gene IDSed0001131
OrganismSechium edule (Chayote v1)
DescriptionLysine-rich arabinogalactan protein like
Genome locationLG07:3202424..3203850
RNA-Seq ExpressionSed0001131
SyntenySed0001131
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593108.1 hypothetical protein SDJN03_12584, partial [Cucurbita argyrosperma subsp. sororia]3.8e-3852.15Show/hide
Query:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPR-INPKSPSPSTDYS---------------NSRVYS
        M+TL++VEQYR EF +  K +   R GN  + + + +N+ R S   GTG  P PL++ SSIPV R  +PK   PSTD +               N  +  
Subjt:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPR-INPKSPSPSTDYS---------------NSRVYS

Query:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR
        DFDE  C       PE WAGPTY  NSP ASSLPMP F IRRN   S +L T S A+++ +  PIVKSAPPSPTRGHNH P SSRELFHGVD ATRTLK+
Subjt:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR

Query:  ILNLDDDSE
        IL+LD DSE
Subjt:  ILNLDDDSE

KAG7025517.1 hypothetical protein SDJN02_12013, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-3751.67Show/hide
Query:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPR-INPKSPSPSTDYS---------------NSRVYS
        M+TL++VEQYR EF +  K +   R GN  + + + +N+ R S   GTG  P PL++ SSIPV R  +PK   PSTD +               +  +  
Subjt:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPR-INPKSPSPSTDYS---------------NSRVYS

Query:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR
        DFDE  C       PE WAGPTY  NSP ASSLPMP F IRRN   S +L T S A+++ +  PIVKSAPPSPTRGHNH P SSRELFHGVD ATRTLK+
Subjt:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR

Query:  ILNLDDDSE
        IL+LD DSE
Subjt:  ILNLDDDSE

XP_022960408.1 uncharacterized protein LOC111461143 [Cucurbita moschata]1.7e-3853.59Show/hide
Query:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPV-----PRI-------NPK--SPSPSTD--YSNSRVYS
        M+TL++VEQYR EF +  K +   RFG+  + + + +N+ R S   GTG  P PL+I SSIPV     P+I       NPK  SP+P +D    N  +  
Subjt:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPV-----PRI-------NPK--SPSPSTD--YSNSRVYS

Query:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR
        DFDE  C       PE WAGPTY  NSP ASSLPMP F IRRN   S +L T S A+++ +  PIVKSAPPSPTRGHNH P SSRELFHGVD ATRTLK+
Subjt:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR

Query:  ILNLDDDSE
        IL+LD DSE
Subjt:  ILNLDDDSE

XP_023514559.1 uncharacterized protein LOC111778815 [Cucurbita pepo subsp. pepo]1.3e-3852.63Show/hide
Query:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPR-INPKSPSPSTDYS---------------NSRVYS
        M+TL++VEQYR EF +  K +   RFG+  + + + +N+ R S   GTG  P PL+I SSIPV R  +PK   PSTD +               N  +  
Subjt:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPR-INPKSPSPSTDYS---------------NSRVYS

Query:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR
        DFDE  C       PE WAGPTY  NSP ASSLPMP F IRRN   S +L T S A+++ +  PIVKSAPPSPTRGHNH P SSRELFHGVD ATRTLK+
Subjt:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR

Query:  ILNLDDDSE
        IL+LD DSE
Subjt:  ILNLDDDSE

XP_038899008.1 uncharacterized protein LOC120086432 [Benincasa hispida]6.2e-4158.74Show/hide
Query:  LEFDSSMQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPRI-NPKSPSPSTD--------YSNSRVYSD
        LEFDS+M+TLV+VEQYR+EF  RVK +ES RFGNL +     K+  R SF  GTG  P PL+I SSIPV    +PK+P PS            N  +  D
Subjt:  LEFDSSMQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPRI-NPKSPSPSTD--------YSNSRVYSD

Query:  FDEQDC------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHPSSRELFHGVDSATRTLKRILN
        FDE  C      PE WAGPTY  NSP ASSLP+P F IR NRT S EL T+SV     K HPIVKSAPPSPTRG+  HPSSRE FHG DSATRTL+RILN
Subjt:  FDEQDC------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHPSSRELFHGVDSATRTLKRILN

Query:  LDDDSE
        LD +SE
Subjt:  LDDDSE

TrEMBL top hitse value%identityAlignment
A0A0A0K5M6 Uncharacterized protein1.3e-3655.17Show/hide
Query:  LEFDSSMQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPV-----PRINPK-SPSPSTDYSNSRVYSDFDE
        LEF S+M+TLV++EQYR+EF  R+K +ES RFGNL +     K+  RF F       PTPL+I SSIPV     P+  P  +P P  + +      DFD 
Subjt:  LEFDSSMQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPV-----PRINPK-SPSPSTDYSNSRVYSDFDE

Query:  QDC------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHPSSRELFHGVDSATRTLKRILNLDD
          C      PE WAGPTY  NSP ASSLP+P F IR NRT S EL T+SV     K HPIVKSAPPSPTRGH  HPSSRE  HG D ATRTL+RILNLD 
Subjt:  QDC------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHPSSRELFHGVDSATRTLKRILNLDD

Query:  DSE
        +SE
Subjt:  DSE

A0A1S3BR78 uncharacterized protein LOC1034926542.5e-3555.45Show/hide
Query:  LEFDSSMQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPRI-NPKSPSPSTDYS-NSRV----YSDFDE
        LEF S+M+TLV+VEQYR+EF  RVK +ES RFGN+ +   K  N+ RF         PTPL+I SSIPV    +PK+P P      N ++      DFDE
Subjt:  LEFDSSMQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPRI-NPKSPSPSTDYS-NSRV----YSDFDE

Query:  QDC------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTASELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHPSSRELFHGVDSATRTLKRILNLDDD
          C      PE WAGPTY  NSP ASSLP+P F IR NRT S     S   SV K H IVKSAPPSPTRG N HPSSRE  H  DSATRTL+RILNLD +
Subjt:  QDC------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTASELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHPSSRELFHGVDSATRTLKRILNLDDD

Query:  SE
        SE
Subjt:  SE

A0A5D3DRH9 Uncharacterized protein2.5e-3555.45Show/hide
Query:  LEFDSSMQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPRI-NPKSPSPSTDYS-NSRV----YSDFDE
        LEF S+M+TLV+VEQYR+EF  RVK +ES RFGN+ +   K  N+ RF         PTPL+I SSIPV    +PK+P P      N ++      DFDE
Subjt:  LEFDSSMQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPRI-NPKSPSPSTDYS-NSRV----YSDFDE

Query:  QDC------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTASELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHPSSRELFHGVDSATRTLKRILNLDDD
          C      PE WAGPTY  NSP ASSLP+P F IR NRT S     S   SV K H IVKSAPPSPTRG N HPSSRE  H  DSATRTL+RILNLD +
Subjt:  QDC------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTASELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHPSSRELFHGVDSATRTLKRILNLDDD

Query:  SE
        SE
Subjt:  SE

A0A6J1D941 uncharacterized protein LOC1110183963.4e-3752.53Show/hide
Query:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPRINPKSPSPSTDYSNSRVYS----------------
        M+ LV++EQYR+EF SRV  +E  RFGN  + + +GK K RFSF       PTPL+I SSIPV R++      S D++N  + +                
Subjt:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPRINPKSPSPSTDYSNSRVYS----------------

Query:  ---DFDEQDC--------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGH-----NHHPSSRELFHGVD
           D DEQ C        PE WAGPTY  NSP ASSLP+P F IR+ RT S EL   S AES VK HPIVKSAPPSPTRGH     NHHPS+RE FHG D
Subjt:  ---DFDEQDC--------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGH-----NHHPSSRELFHGVD

Query:  SATRTLKRILNLDDDSE
        SATRTL+RILNL  DSE
Subjt:  SATRTLKRILNLDDDSE

A0A6J1H8U6 uncharacterized protein LOC1114611438.2e-3953.59Show/hide
Query:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPV-----PRI-------NPK--SPSPSTD--YSNSRVYS
        M+TL++VEQYR EF +  K +   RFG+  + + + +N+ R S   GTG  P PL+I SSIPV     P+I       NPK  SP+P +D    N  +  
Subjt:  MQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPV-----PRI-------NPK--SPSPSTD--YSNSRVYS

Query:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR
        DFDE  C       PE WAGPTY  NSP ASSLPMP F IRRN   S +L T S A+++ +  PIVKSAPPSPTRGHNH P SSRELFHGVD ATRTLK+
Subjt:  DFDEQDC-------PERWAGPTYMMNSPSASSLPMPTFPIRRNRTAS-ELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHP-SSRELFHGVDSATRTLKR

Query:  ILNLDDDSE
        IL+LD DSE
Subjt:  ILNLDDDSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTTTTGGAGTTTGATTCTTCGATGCAAACATTGGTTGTTGTAGAACAGTACAGAAATGAGTTCATTAGTCGGGTCAAGATTGTAGAATCGGATCGATTTGGGAA
TTTGATGATGGATAAAAGGAAGGGGAAAAATAAAAAACGATTCAGTTTTGGATTGGGGACTGGATCTTGCCCTACTCCATTGAAGATTTTTTCTTCAATCCCTGTTCCTC
GTATAAACCCTAAATCACCATCCCCTTCGACTGATTATAGTAATTCTCGGGTTTATTCGGATTTCGATGAACAAGATTGTCCCGAGCGTTGGGCAGGACCAACTTACATG
ATGAATTCACCCTCTGCAAGTTCATTGCCAATGCCCACATTTCCGATTCGACGAAATAGAACCGCGTCGGAATTGCTTACCAGTTCAGTTGCTGAATCGGTTGTAAAAGA
TCACCCGATTGTGAAATCTGCACCACCATCCCCAACTCGGGGCCACAATCATCATCCTTCTTCCAGGGAGCTATTTCATGGTGTTGATTCTGCAACAAGAACACTCAAGC
GAATTCTCAACCTTGATGATGACTCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATTCATTCAACTTCGAGTTCAATCGCTCGCAAAAAGAGCAATTCATCAATAAAATCCCACAAATCCCATTACGGATTTCATCTTCGTTGTCTCAAATTTGATCGTTCGTT
GATGATTCATTCTCCTCCAAGTTTCAGATTTAGGGTTTTTCCAGTTCGTCGTTGAGTTGATTTGATGTTCTTTGGGTAAAGATTATGAGTTGTGGATCTTTGAATGATTT
TGTGATTGAATGCATTTTTTGGAGTTTGATTCTTCGATGCAAACATTGGTTGTTGTAGAACAGTACAGAAATGAGTTCATTAGTCGGGTCAAGATTGTAGAATCGGATCG
ATTTGGGAATTTGATGATGGATAAAAGGAAGGGGAAAAATAAAAAACGATTCAGTTTTGGATTGGGGACTGGATCTTGCCCTACTCCATTGAAGATTTTTTCTTCAATCC
CTGTTCCTCGTATAAACCCTAAATCACCATCCCCTTCGACTGATTATAGTAATTCTCGGGTTTATTCGGATTTCGATGAACAAGATTGTCCCGAGCGTTGGGCAGGACCA
ACTTACATGATGAATTCACCCTCTGCAAGTTCATTGCCAATGCCCACATTTCCGATTCGACGAAATAGAACCGCGTCGGAATTGCTTACCAGTTCAGTTGCTGAATCGGT
TGTAAAAGATCACCCGATTGTGAAATCTGCACCACCATCCCCAACTCGGGGCCACAATCATCATCCTTCTTCCAGGGAGCTATTTCATGGTGTTGATTCTGCAACAAGAA
CACTCAAGCGAATTCTCAACCTTGATGATGACTCTGAATGAATATGGTGAATGATGAATGATGTTTCAGTGGGCATCAATCAAGCTAGCTCACTTGTTTGTAGGACATTC
TTTTTGATGTGGGGATTGACTGTGTAAATATAATGAAGAATCATGGTTGGTATATGTGTAGGACATAGGAGTTTGATTCTCTTTTGTGTTTTTGAGAAGTGGGATTTGTA
GCTGATGGACTTGAGAATCATGGTTGAATATATTTTGAAGAATCATGGTTGATATAATAATATGTGTAGGAGTTAGGAATTTGATTCCCTTTTGTGTTTTTGAGAATTGG
GATTTGTAGCTGATGGTAAATATTCTCAGCTTTATTCAACCTCAAGCTTCTTAGAATTGTGAATGGTTGCTTAGTTGTGGAGCTTGTTTCAACCACTAGAAAACAAGGGG
TATAGCACCAAGAAATTCAGCTACCTCAAACTTGTTGGACAAGAAGATAGAGAGGATGATGTAATTTCTGAACTTTATCTTTTTGCTTAATCTTTTTGTTTATCACACAC
TTCTAGAGTTCTGA
Protein sequenceShow/hide protein sequence
MHFLEFDSSMQTLVVVEQYRNEFISRVKIVESDRFGNLMMDKRKGKNKKRFSFGLGTGSCPTPLKIFSSIPVPRINPKSPSPSTDYSNSRVYSDFDEQDCPERWAGPTYM
MNSPSASSLPMPTFPIRRNRTASELLTSSVAESVVKDHPIVKSAPPSPTRGHNHHPSSRELFHGVDSATRTLKRILNLDDDSE