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Sed0001142 (gene) of Chayote v1 genome

Gene IDSed0001142
OrganismSechium edule (Chayote v1)
DescriptionPrefoldin subunit 6
Genome locationLG10:874378..883438
RNA-Seq ExpressionSed0001142
SyntenySed0001142
Gene Ontology termsNA
InterPro domainsIPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACI68967.1 Prefoldin subunit 6 [Salmo salar]4.0e-0432.04Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK
        I+KK+QS+L+  + +QK   ++               +++  L +LD    VYK + PVLVKQD EE +A + KRL Y+  E++R+    +D+  K  ++
Subjt:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK

Query:  RKI
        R++
Subjt:  RKI

ACO08333.1 Prefoldin subunit 6 [Oncorhynchus mykiss]5.3e-0432.04Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK
        I+KK+QS+L+  + +QK   ++               +++  L +LD    VYK + PVLVKQD EE +A ++KRL Y+  E++R+    +D+  K  + 
Subjt:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK

Query:  RKI
        R++
Subjt:  RKI

KAG7518781.1 prefoldin subunit 6 [Solea senegalensis]6.9e-0432.04Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK
        I+KK++++L+    +QK   ++               +++  L ILD+   VYK + PVLVKQDP+E +A + KRL Y+  E+ R+    +DL  K  ++
Subjt:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK

Query:  RKI
        R++
Subjt:  RKI

RXH86418.1 hypothetical protein DVH24_017471 [Malus domestica]2.4e-0428.91Show/hide
Query:  MAEEQVAKKVTKQRSCRPGSVTYIRKKMQSDLKDLRNLQKGNDRNFYLPLLRFSLHILDALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFF
        + +++  K +  +      ++  +++++++   DL  +QKG     Y+ +    L   DA V+K + PVLVKQD  E RA + KR+ Y+ AEL+R +A  
Subjt:  MAEEQVAKKVTKQRSCRPGSVTYIRKKMQSDLKDLRNLQKGNDRNFYLPLLRFSLHILDALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFF

Query:  RDLGGKIIRKRKISLERRLRTLTLKETK
        +DL  K   K++   + + R   L+  K
Subjt:  RDLGGKIIRKRKISLERRLRTLTLKETK

XP_031443024.1 prefoldin subunit 6 [Clupea harengus]4.0e-0432.04Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK
        I+KK+QS+L+  + +QK   ++               +++  L +LDA  +VYK + PVLVKQD +E +A + KRL Y+  E++R+    +D+  K  + 
Subjt:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK

Query:  RKI
        R++
Subjt:  RKI

TrEMBL top hitse value%identityAlignment
A0A498ISJ7 Uncharacterized protein1.1e-0428.91Show/hide
Query:  MAEEQVAKKVTKQRSCRPGSVTYIRKKMQSDLKDLRNLQKGNDRNFYLPLLRFSLHILDALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFF
        + +++  K +  +      ++  +++++++   DL  +QKG     Y+ +    L   DA V+K + PVLVKQD  E RA + KR+ Y+ AEL+R +A  
Subjt:  MAEEQVAKKVTKQRSCRPGSVTYIRKKMQSDLKDLRNLQKGNDRNFYLPLLRFSLHILDALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFF

Query:  RDLGGKIIRKRKISLERRLRTLTLKETK
        +DL  K   K++   + + R   L+  K
Subjt:  RDLGGKIIRKRKISLERRLRTLTLKETK

A0A565AWW3 Uncharacterized protein4.3e-0434.51Show/hide
Query:  IRKKMQSDLKDLRNLQKG------NDRNFYLPLLRFSLHILDALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRK--ISL
        +++ +++   DL  +QKG      +D+   L LL       DA VYK + PVLVKQD  E  A + KR+ Y+ AEL+R +A  +D+  K I KR   + L
Subjt:  IRKKMQSDLKDLRNLQKG------NDRNFYLPLLRFSLHILDALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKRK--ISL

Query:  ERRLRTLTLKETK
        ++R++++     K
Subjt:  ERRLRTLTLKETK

A0A6P8GUZ8 prefoldin subunit 62.0e-0432.04Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK
        I+KK+QS+L+  + +QK   ++               +++  L +LDA  +VYK + PVLVKQD +E +A + KRL Y+  E++R+    +D+  K  + 
Subjt:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK

Query:  RKI
        R++
Subjt:  RKI

B5XDP7 Prefoldin subunit 62.0e-0432.04Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK
        I+KK+QS+L+  + +QK   ++               +++  L +LD    VYK + PVLVKQD EE +A + KRL Y+  E++R+    +D+  K  ++
Subjt:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK

Query:  RKI
        R++
Subjt:  RKI

C1BH30 Prefoldin subunit 62.5e-0432.04Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK
        I+KK+QS+L+  + +QK   ++               +++  L +LD    VYK + PVLVKQD EE +A ++KRL Y+  E++R+    +D+  K  + 
Subjt:  IRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK

Query:  RKI
        R++
Subjt:  RKI

SwissProt top hitse value%identityAlignment
A8Y197 Probable prefoldin subunit 65.5e-0443.4Show/hide
Query:  DALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKR
        D+ VYK + PVLV+QD EE R+ + KRL ++ +E++R  A   D+  K I +R
Subjt:  DALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRKR

O15212 Prefoldin subunit 63.2e-0433.33Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDL
        I+KK+Q +++  + LQK   ++               +++  L +LD   +V+K + PVLVKQ+  E RA + KRL Y+ AE++R+ +  RDL
Subjt:  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDL

Q03958 Prefoldin subunit 63.2e-0433.33Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDL
        I+KK+Q +++  + LQK   ++               +++  L +LD   +V+K + PVLVKQ+  E RA + KRL Y+ AE++R+ +  RDL
Subjt:  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDL

Q17Q89 Prefoldin subunit 63.2e-0433.33Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDL
        I+KK+Q +++  + LQK   ++               +++  L +LD   +V+K + PVLVKQ+  E RA + KRL Y+ AE++R+ +  RDL
Subjt:  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDL

Q5TJE6 Prefoldin subunit 63.2e-0433.33Show/hide
Query:  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDL
        I+KK+Q +++  + LQK   ++               +++  L +LD   +V+K + PVLVKQ+  E RA + KRL Y+ AE++R+ +  RDL
Subjt:  IRKKMQSDLKDLRNLQKGNDRNF-----------YLPLLRFSLHILDA--LVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDL

Arabidopsis top hitse value%identityAlignment
AT1G29990.1 prefoldin 61.9e-0733.06Show/hide
Query:  SVTYIRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHIL--DALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGK
        +V  +++ +++   DL  +QK   +N  L            L+   L +L  DA VYK + PVLVKQD  E  A + KR+ Y+ AEL+R +A  +D+  K
Subjt:  SVTYIRKKMQSDLKDLRNLQKGNDRNFYL-----------PLLRFSLHIL--DALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGK

Query:  IIRKRK--ISLERRLRTLTLKETK
           KR+  + L++RL+T+   + K
Subjt:  IIRKRK--ISLERRLRTLTLKETK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGAACAGGTAGCGAAGAAAGTAACGAAGCAGCGAAGTTGCAGACCGGGATCCGTCACATATATCAGGAAGAAAATGCAGAGCGATCTCAAGGATCTCAGAAA
TTTGCAGAAAGGTAATGATCGTAACTTCTATCTTCCTCTCCTCCGATTCAGCCTTCACATTCTTGATGCACTTGTTTACAAATCTGTTGATCCTGTTCTTGTGAAGCAAG
ATCCAGAAGAGCTAAGAGCATTACTTTTGAAAAGATTGGGTTATCTCGGTGCTGAATTGGAGCGCTTTAATGCATTTTTCAGAGATTTGGGAGGGAAGATAATTAGAAAA
AGAAAGATTTCCTTAGAGCGAAGGCTTCGAACTCTCACGCTTAAGGAGACAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGAACAGGTAGCGAAGAAAGTAACGAAGCAGCGAAGTTGCAGACCGGGATCCGTCACATATATCAGGAAGAAAATGCAGAGCGATCTCAAGGATCTCAGAAA
TTTGCAGAAAGGTAATGATCGTAACTTCTATCTTCCTCTCCTCCGATTCAGCCTTCACATTCTTGATGCACTTGTTTACAAATCTGTTGATCCTGTTCTTGTGAAGCAAG
ATCCAGAAGAGCTAAGAGCATTACTTTTGAAAAGATTGGGTTATCTCGGTGCTGAATTGGAGCGCTTTAATGCATTTTTCAGAGATTTGGGAGGGAAGATAATTAGAAAA
AGAAAGATTTCCTTAGAGCGAAGGCTTCGAACTCTCACGCTTAAGGAGACAAAATAG
Protein sequenceShow/hide protein sequence
MAEEQVAKKVTKQRSCRPGSVTYIRKKMQSDLKDLRNLQKGNDRNFYLPLLRFSLHILDALVYKSVDPVLVKQDPEELRALLLKRLGYLGAELERFNAFFRDLGGKIIRK
RKISLERRLRTLTLKETK