; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001146 (gene) of Chayote v1 genome

Gene IDSed0001146
OrganismSechium edule (Chayote v1)
DescriptionHNH domain-containing protein
Genome locationLG08:1391874..1395498
RNA-Seq ExpressionSed0001146
SyntenySed0001146
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR002711 - HNH endonuclease
IPR003615 - HNH nuclease


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453224.1 PREDICTED: uncharacterized protein LOC103494011 isoform X2 [Cucumis melo]6.1e-9188.33Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        MEATSSSPSP RSRGG R+SGSG+G+ RPRFFD KAKA CW KAD VPGRHPERWRKDAAGNVVCKRFCNC GCLCFEYDHIVP+SKGGESTADNCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL
        TRVNRFKS+KD VD+S+L+G+SCD+KF+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPY EDSL
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL

XP_022135260.1 uncharacterized protein LOC111007267 [Momordica charantia]8.0e-9188.33Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        ME TS SPSP RSRGG+R+SGSGNG+ RPRFFDTKAKAICW KAD VPGRHP+RWRKDAAGNVVCKRFCNC GCLCFEYDHIVPFSKGGESTA+NCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL
        TRVNRFKSDKD VD+SQL+G+SCD++F+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP  EDSL
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL

XP_022933741.1 uncharacterized protein LOC111441065 [Cucurbita moschata]1.3e-9392.18Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        MEATSSSPSP RSRGG R SGSGNG  RPRFFDTKAKAICW KADTVPGRHPERWRKDAAGNVVCKRFCNC GCLCFEYDHIVPFSKGGESTADNCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDS
        TRVNRFKSDKD VD+SQL+G+SCD+KF+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPY EDS
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDS

XP_023531696.1 uncharacterized protein LOC111793864 [Cucurbita pepo subsp. pepo]1.3e-9392.18Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        MEATSSSPSP RSRGG R SGSGNG  RPRFFDTKAKAICW KADTVPGRHPERWRKDAAGNVVCKRFCNC GCLCFEYDHIVPFSKGGESTADNCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDS
        TRVNRFKSDKD VD+SQL+G+SCD+KF+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPY EDS
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDS

XP_038878253.1 uncharacterized protein LOC120070538 [Benincasa hispida]4.2e-9288.89Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        MEATSSSPSP RSRGG+R+SGSG+G+ RPRFFDTKAKAICWDKAD VPGRHPERWRKDAAGNVVCKRFCNC GCLCFEYDHIVP+SKGGESTADNCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL
        TRVNRFKS+++ VD+S+L+G+SCDIKF+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYK+KDRLAPCKLPY EDSL
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL

TrEMBL top hitse value%identityAlignment
A0A1S3BVP6 uncharacterized protein LOC103494011 isoform X23.0e-9188.33Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        MEATSSSPSP RSRGG R+SGSG+G+ RPRFFD KAKA CW KAD VPGRHPERWRKDAAGNVVCKRFCNC GCLCFEYDHIVP+SKGGESTADNCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL
        TRVNRFKS+KD VD+S+L+G+SCD+KF+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPY EDSL
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL

A0A5A7UWI1 HNH endonuclease3.0e-9188.33Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        MEATSSSPSP RSRGG R+SGSG+G+ RPRFFD KAKA CW KAD VPGRHPERWRKDAAGNVVCKRFCNC GCLCFEYDHIVP+SKGGESTADNCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL
        TRVNRFKS+KD VD+S+L+G+SCD+KF+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPY EDSL
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL

A0A6J1C0N7 uncharacterized protein LOC1110072673.9e-9188.33Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        ME TS SPSP RSRGG+R+SGSGNG+ RPRFFDTKAKAICW KAD VPGRHP+RWRKDAAGNVVCKRFCNC GCLCFEYDHIVPFSKGGESTA+NCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL
        TRVNRFKSDKD VD+SQL+G+SCD++F+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP  EDSL
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL

A0A6J1EZW3 uncharacterized protein LOC1114410656.4e-9492.18Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        MEATSSSPSP RSRGG R SGSGNG  RPRFFDTKAKAICW KADTVPGRHPERWRKDAAGNVVCKRFCNC GCLCFEYDHIVPFSKGGESTADNCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDS
        TRVNRFKSDKD VD+SQL+G+SCD+KF+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPY EDS
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDS

A0A6J1I7G1 uncharacterized protein LOC1114715096.4e-9492.18Show/hide
Query:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ
        MEATSSSPSP RSRGG R SGSGNG  RPRFFDTKAKAICW KADTVPGRHPERWRKDAAGNVVCKRFCNC GCLCFEYDHIVPFSKGGESTADNCQILQ
Subjt:  MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQ

Query:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDS
        TRVNRFKSDKD VD+SQL+G+SCD+KF+DKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPY EDS
Subjt:  TRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18680.1 HNH endonuclease domain-containing protein5.9e-6868.26Show/hide
Query:  PSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFK
        P P+     +R++   NGE RPRFFD KAK  CW  AD VPGRHPERWRKD AGN+VCKRF NC+GCLCFEYDHIVP+SKGGES A+NCQILQTRVNRFK
Subjt:  PSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFK

Query:  SDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP
        S ++ VD++ L+ +SC ++F+DKELD+IEMAVYGDV+RPG +CRC+TV+E+LGQ KSKD  A C+LP
Subjt:  SDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP

AT3G47490.1 HNH endonuclease2.8e-3345.52Show/hide
Query:  SGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFKSDKDGVDSSQLQ
        SG G+    PR F    K  CW+KA+ + GR PERWR+D  GN+V ++   C GCLC +YDHIVP+SKGG+ST +NCQ+LQ +VNR K +K  +  S+L 
Subjt:  SGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFKSDKDGVDSSQLQ

Query:  GFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCR
          S   + + +++D+IE+  YG+V R      CR
Subjt:  GFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCR

AT3G47490.2 HNH endonuclease2.8e-1751.47Show/hide
Query:  SGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSK
        SG G+    PR F    K  CW+KA+ + GR PERWR+D  GN+V ++   C GCLC +YDHIVP+SK
Subjt:  SGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSK

AT3G47490.3 HNH endonuclease1.1e-2939.61Show/hide
Query:  SGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFS--------------------KGGESTADNCQIL
        SG G+    PR F    K  CW+KA+ + GR PERWR+D  GN+V ++   C GCLC +YDHIVP+S                    KGG+ST +NCQ+L
Subjt:  SGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFS--------------------KGGESTADNCQIL

Query:  QTRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCR
        Q +VNR K +K  +  S+L   S   + + +++D+IE+  YG+V R      CR
Subjt:  QTRVNRFKSDKDGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTACTTCCAGTTCGCCGTCACCGGCGCGTTCTCGCGGCGGGAACAGAAACAGTGGCTCCGGAAACGGGGAAGGACGGCCAAGATTTTTCGACACGAAAGCGAA
AGCCATTTGTTGGGACAAGGCCGACACCGTCCCCGGCCGACATCCCGAGCGGTGGCGGAAGGACGCCGCCGGTAATGTCGTCTGTAAACGCTTCTGCAACTGTCATGGAT
GCCTCTGCTTCGAGTACGATCATATTGTCCCCTTCTCTAAAGGCGGCGAATCTACGGCGGATAATTGCCAGATTCTTCAGACGAGAGTGAACAGATTCAAATCGGACAAG
GACGGTGTTGATTCGTCTCAGCTGCAAGGATTTTCATGTGATATCAAGTTTTCTGATAAGGAGCTCGACATAATTGAAATGGCTGTTTATGGAGATGTAATCCGGCCAGG
GAACCAGTGTCGTTGCAGAACAGTTTCTGAAATGCTTGGCCAATATAAATCCAAAGACCGTTTGGCCCCTTGCAAGTTGCCATACAAAGAAGATTCCTTGTAA
mRNA sequenceShow/hide mRNA sequence
GCAATGGTCCGGTTTCGGACAATTTAACCGGCAGGAAATAATCGCAAGTCTTTAGGTATTGTTTCGGCCGTCTTCTACAACTCCGTGCCGCCGGCCGCCGTCGAGACTCC
AATGGAAGCTACTTCCAGTTCGCCGTCACCGGCGCGTTCTCGCGGCGGGAACAGAAACAGTGGCTCCGGAAACGGGGAAGGACGGCCAAGATTTTTCGACACGAAAGCGA
AAGCCATTTGTTGGGACAAGGCCGACACCGTCCCCGGCCGACATCCCGAGCGGTGGCGGAAGGACGCCGCCGGTAATGTCGTCTGTAAACGCTTCTGCAACTGTCATGGA
TGCCTCTGCTTCGAGTACGATCATATTGTCCCCTTCTCTAAAGGCGGCGAATCTACGGCGGATAATTGCCAGATTCTTCAGACGAGAGTGAACAGATTCAAATCGGACAA
GGACGGTGTTGATTCGTCTCAGCTGCAAGGATTTTCATGTGATATCAAGTTTTCTGATAAGGAGCTCGACATAATTGAAATGGCTGTTTATGGAGATGTAATCCGGCCAG
GGAACCAGTGTCGTTGCAGAACAGTTTCTGAAATGCTTGGCCAATATAAATCCAAAGACCGTTTGGCCCCTTGCAAGTTGCCATACAAAGAAGATTCCTTGTAACAAAAA
GAAGACTTGAAACTAAAGTATGTTTTCTTCATTTGCTATAGAGCTATCAACTTAATACACTTGATGCAAATAATGTAGGACTATATCATTAGAACTACGGACCTTCAGAG
ACTCAGCTGTGACATTACTCCTTCGATGTCTTCCGGTGCTTGGCCTAGGGACGGGCATGGTTACCCTTGTTTCAAAAAAAAAAAGAACTGGGGACCTCCATGATTTGATT
AGATTAACATTAATGAATATCAACCTTTTGTCCCCAAGGAGTGGTGCAGTGGTTGAAGACTTGGGTTTTGAGGGTATACTCCCCTCAAGATTTCGAGTTCGAGTCTTCCC
TGTGACAGTACTCCTTCGACATCTCCGGTGTCTGGCCTAGGGACGGGCGTGGTTATCTTGTTTAAAAAAAAAAAATAATAATAAATATCAACCTTCTGTTTCTTTTTCTT
TCTTTTTTTGGCTCATGAATAGTTGGTGTTAAGAAAATTATGGATTTGGAAAATCTAGAAGTTAAATGGAGATTCAAACCTCTTTTGTCTCATAACTAGTTATGTCATAA
CAAGTTTAACATTTTTAGTATTGGGCACATTTCTCTTGTTTGGGTTAGGTTGGGTTTTTTGATTCATCAATCCATTCAACTTTATGTATTAGAACAATCTAACTTGTATA
GATTATTGAGTTACGTTTGTTCTCTTCTTTTCTCTTTAAATTCGACCTCATAGTCCATGAAATTAAATTCAAATCCAAGTTGTCTATTTTATTAGCAGTG
Protein sequenceShow/hide protein sequence
MEATSSSPSPARSRGGNRNSGSGNGEGRPRFFDTKAKAICWDKADTVPGRHPERWRKDAAGNVVCKRFCNCHGCLCFEYDHIVPFSKGGESTADNCQILQTRVNRFKSDK
DGVDSSQLQGFSCDIKFSDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPYKEDSL