; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001148 (gene) of Chayote v1 genome

Gene IDSed0001148
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein D-29-like
Genome locationLG13:6623321..6623767
RNA-Seq ExpressionSed0001148
SyntenySed0001148
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146505.1 late embryogenesis abundant protein D-29 [Cucumis sativus]7.9e-0450.94Show/hide
Query:  DEKMDGMKSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM
        +E +  MK ++KQ +E+ KLDEKA++VK  ASE +  AKDKA SW++WA +K+
Subjt:  DEKMDGMKSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM

TrEMBL top hitse value%identityAlignment
A0A0A0KY19 Late embryogenesis abundant3.8e-0450.94Show/hide
Query:  DEKMDGMKSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM
        +E +  MK ++KQ +E+ KLDEKA++VK  ASE +  AKDKA SW++WA +K+
Subjt:  DEKMDGMKSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM

A0A1S3BSF4 late embryogenesis abundant protein D-29-like5.0e-0439.29Show/hide
Query:  VLMLVFGAEIARGWGEDMKNQFNEFSEEHKLDEKMDGMKSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM
        V++LV  AE  RG GED                 +  +K  + +F+++ KLDEKA++VK  ASE +  AKDKA SW++WA +K+
Subjt:  VLMLVFGAEIARGWGEDMKNQFNEFSEEHKLDEKMDGMKSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM

A0A5D3D1U2 Late embryogenesis abundant protein D-29-like5.0e-0439.29Show/hide
Query:  VLMLVFGAEIARGWGEDMKNQFNEFSEEHKLDEKMDGMKSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM
        V++LV  AE  RG GED                 +  +K  + +F+++ KLDEKA++VK  ASE +  AKDKA SW++WA +K+
Subjt:  VLMLVFGAEIARGWGEDMKNQFNEFSEEHKLDEKMDGMKSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM

A0A6J1ES75 methyl-CpG-binding domain-containing protein 10-like5.0e-0442.86Show/hide
Query:  KNQFNEFSEEHKLDEKMDGM-----------KSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM
        K    E +E+ KL EK + +           K ++ + +EE KL EKA++VK+GASEA++ AKDKAGSW++WA  K+
Subjt:  KNQFNEFSEEHKLDEKMDGM-----------KSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM

A0A6J1J378 uncharacterized protein CG45076-like5.0e-0442.86Show/hide
Query:  KNQFNEFSEEHKLDEKMDGM-----------KSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM
        K    E +E+ KL EK + +           K ++ + +EE KL EKA++VK+GASEA++ AKDKAGSW++WA  K+
Subjt:  KNQFNEFSEEHKLDEKMDGM-----------KSDLKQFSEEHKLDEKADSVKQGASEAFDQAKDKAGSWTDWAKEKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAACGACCACGTGTCGCAAAACGACCCGGTAATAAATAACGGTCCGGGCCACACGGGCGGCTATAAAACCCAAGCTCTCACCCCGGTTCTCTCGTCAGGGTCCAA
AAGCGGTTTAGAAAATATGGCGGGAATTATGAGGAGAACGGTGATGTTTGGTTTGGTTCTAATGCTTGTGTTTGGGGCGGAGATAGCAAGGGGATGGGGGGAGGACATGA
AGAATCAGTTTAATGAGTTTTCTGAGGAACACAAGCTTGATGAGAAGATGGACGGCATGAAGAGTGATTTGAAGCAATTTTCTGAGGAGCACAAGCTCGACGAAAAAGCC
GACTCGGTTAAACAGGGTGCTTCCGAGGCCTTCGACCAAGCCAAGGACAAAGCCGGGTCCTGGACCGATTGGGCTAAAGAAAAGATGTATATTTCGAACGTGTTATCTTT
TGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACAACGACCACGTGTCGCAAAACGACCCGGTAATAAATAACGGTCCGGGCCACACGGGCGGCTATAAAACCCAAGCTCTCACCCCGGTTCTCTCGTCAGGGTCCAA
AAGCGGTTTAGAAAATATGGCGGGAATTATGAGGAGAACGGTGATGTTTGGTTTGGTTCTAATGCTTGTGTTTGGGGCGGAGATAGCAAGGGGATGGGGGGAGGACATGA
AGAATCAGTTTAATGAGTTTTCTGAGGAACACAAGCTTGATGAGAAGATGGACGGCATGAAGAGTGATTTGAAGCAATTTTCTGAGGAGCACAAGCTCGACGAAAAAGCC
GACTCGGTTAAACAGGGTGCTTCCGAGGCCTTCGACCAAGCCAAGGACAAAGCCGGGTCCTGGACCGATTGGGCTAAAGAAAAGATGTATATTTCGAACGTGTTATCTTT
TGATTAA
Protein sequenceShow/hide protein sequence
MYNDHVSQNDPVINNGPGHTGGYKTQALTPVLSSGSKSGLENMAGIMRRTVMFGLVLMLVFGAEIARGWGEDMKNQFNEFSEEHKLDEKMDGMKSDLKQFSEEHKLDEKA
DSVKQGASEAFDQAKDKAGSWTDWAKEKMYISNVLSFD