; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001162 (gene) of Chayote v1 genome

Gene IDSed0001162
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG01:1672773..1673642
RNA-Seq ExpressionSed0001162
SyntenySed0001162
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027009.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-9465.5Show/hide
Query:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT
        RG+N  IR+VWA+N  +EI  L+ C+  ++++SIDTEFPG IK++PWG +DE+LYADFRFNVNQTKV+QLG+T  DE GNI  +WEFNFSDFDPE DAH 
Subjt:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT

Query:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK
        P+SI FLK +GLDF KLKK+GI    FA  FL  +R + I RWITFHGLYDIGYL+ AMGV++ LPE++GEF  IV   VG VRDLKHM+RFCEGL+ G 
Subjt:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK

Query:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE
        LGLE+L QLL QKRFG KH+AGSDSL+TA+LH KM + +D   EICDGFLYG S K E
Subjt:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE

XP_022947868.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.9e-9465.5Show/hide
Query:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT
        RG+N  IR+VWA+N  +EI  L+ C+  ++I+SIDTEFPG IK++PWG  DE+LYADFRFNVNQTKV+QLG+T  DESGNI  +WEFNFSDFDPE DAH 
Subjt:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT

Query:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK
        P+SI FLK +GLDF KLKK+GI    FA  FL  +  + I RW+TFHGLYDIGYL+ AMGV++ LPE++GEF  IV   VG VRDLKHM+RFCEGL+ G 
Subjt:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK

Query:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE
        LGLE+L QLL QKRFG KH+AGSDSL+TA+LH KM + +D   EICDGFLYG S K E
Subjt:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE

XP_022970734.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]1.1e-9465.12Show/hide
Query:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT
        RG+N  I +VWA+N  +EI  L+HC+  + ++SIDTEFPG IK++PWG +DE+LYADFRFNVNQTKV+QLG+T  DESGNI  +WEFNFSDFDPE DAH 
Subjt:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT

Query:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK
        P+SI FLK +GLDF KLKK+GI    FA  FL  +R + I +WITFHGLYDIGYL+ A+GV++ LPE++GEF  IV   VG VRDLKHM+RFCEGL+ G 
Subjt:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK

Query:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE
        LGLE+L QLL QKRFG KH+AGSDSL+TA+LH KM + +D   EICDGFLYG S K E
Subjt:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE

XP_023533172.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]8.6e-9565.12Show/hide
Query:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT
        RG+N  IR+VWA+N  +EI  L+ C+  ++++SIDTEFPG IK++PWG +DE+LYADFRFNVNQTKV+QLG+T  DE GNI  +WEFNFSDFDPE DAH 
Subjt:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT

Query:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK
        P+SI FLK +GLDF KLKK+GI    FA  FL  +R + I RW+TFHGLYDIGYL+ AMGV++ LPE++GEF  IV   VG VRDLKHM+RFCEGL+ G 
Subjt:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK

Query:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE
        LGLE+L QLL QKRFG KH+AGSDSL+TA+LH KM + +D   EICDGFLYG S K E
Subjt:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]9.8e-9961.49Show/hide
Query:  GIGRGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETD
        G  R     I +VWA NF  EIS L  C++FH I+SIDTEFPGFI+ SPWG +DE LY DFRFNVNQTK++QLGLTA D+SG I  SWEFNFSDFDPE D
Subjt:  GIGRGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETD

Query:  AHTPSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQ
        A +PSS +FL+ +GLDF+KLKK GI    F   F+ I+R + + RW+TFHGLYDIGYL+KAMG+ E LPE+M EFA +VV  +GIVRDLKHM+RFCEGL+
Subjt:  AHTPSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQ

Query:  QGKLGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLELMDMYQNQNFRLV-------YQSPVY-YGPCYLHY
         GKLGLERL +LL QKR+G KHNAGSDSLLTA  H +M + FD++ EICDG+LYGFS+KL+ MD+  N   R +       Y  P+Y Y P Y+ Y
Subjt:  QGKLGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLELMDMYQNQNFRLV-------YQSPVY-YGPCYLHY

TrEMBL top hitse value%identityAlignment
A0A6J1G7T4 Poly(A)-specific ribonuclease9.2e-9565.5Show/hide
Query:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT
        RG+N  IR+VWA+N  +EI  L+ C+  ++I+SIDTEFPG IK++PWG  DE+LYADFRFNVNQTKV+QLG+T  DESGNI  +WEFNFSDFDPE DAH 
Subjt:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT

Query:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK
        P+SI FLK +GLDF KLKK+GI    FA  FL  +  + I RW+TFHGLYDIGYL+ AMGV++ LPE++GEF  IV   VG VRDLKHM+RFCEGL+ G 
Subjt:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK

Query:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE
        LGLE+L QLL QKRFG KH+AGSDSL+TA+LH KM + +D   EICDGFLYG S K E
Subjt:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE

A0A6J1I1E6 putative CCR4-associated factor 1 homolog 86.0e-9464.73Show/hide
Query:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT
        RG+N  I +VWA+N  +EI  L+HC+  + ++SIDTEFPG IK++PWG +DE+LYADFRFNVNQTKV+QL +T  DESGNI  +WEFNFSDFDPE DAH 
Subjt:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT

Query:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK
        P+SI FLK +GLDF KLKK+GI    FA  FL  +R + I +WITFHGLYDIGYL+ A+GV++ LPE++GEF  IV   VG VRDLKHM+RFCEGL+ G 
Subjt:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK

Query:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE
        LGLE+L QLL QKRFG KH+AGSDSL+TA+LH KM + +D   EICDGFLYG S K E
Subjt:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE

A0A6J1I3Q4 Poly(A)-specific ribonuclease1.6e-9464.73Show/hide
Query:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT
        RG+N  I +VWA+N  +EI  L+HC+  + ++SIDTEFPG IK++PWG +DE+LYADFRFNVNQTKV+QLG+T  DESGNI  +WEFNFSDFDPE DAH 
Subjt:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT

Query:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK
        P+SI FLK +GLDF KLKK+GI    FA  FL  +R + I +WITFHGLYDIGYL+ A+GV++ LPE++GEF  IV   VG VRDLKHM+RFCEGL+ G 
Subjt:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK

Query:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE
        LGLE+L QLL QKRFG KH+AGSDSL+T +LH KM + +D   EICDGFLYG S K E
Subjt:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE

A0A6J1I4S7 Poly(A)-specific ribonuclease2.1e-9464.73Show/hide
Query:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT
        RG+N  I +VWA+N  +EI  L+HC+  + ++SIDTEFPG IK++PWG +DE+LYADFRFNVNQTKV+QLG+T  DESG+I  +WEFNFSDFDPE DAH 
Subjt:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT

Query:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK
        P+SI FLK +GLDF KLKK+GI    FA  FL  +R + I +WITFHGLYDIGYL+ A+GV++ LPE++GEF  IV   VG VRDLKHM+RFCEGL+ G 
Subjt:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK

Query:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE
        LGLE+L QLL QKRFG KH+AGSDSL+TA+LH KM + +D   EICDGFLYG S K E
Subjt:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE

A0A6J1I6H7 Poly(A)-specific ribonuclease5.4e-9565.12Show/hide
Query:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT
        RG+N  I +VWA+N  +EI  L+HC+  + ++SIDTEFPG IK++PWG +DE+LYADFRFNVNQTKV+QLG+T  DESGNI  +WEFNFSDFDPE DAH 
Subjt:  RGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHT

Query:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK
        P+SI FLK +GLDF KLKK+GI    FA  FL  +R + I +WITFHGLYDIGYL+ A+GV++ LPE++GEF  IV   VG VRDLKHM+RFCEGL+ G 
Subjt:  PSSITFLKDHGLDFDKLKKEGI----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGK

Query:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE
        LGLE+L QLL QKRFG KH+AGSDSL+TA+LH KM + +D   EICDGFLYG S K E
Subjt:  LGLERLCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLE

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 56.7e-4241.28Show/hide
Query:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK
        +VW  N   E++ +  C+K  N ++IDTEFPG +K++P    DE  Y D +FNV+ T ++QLGLT   +   I  +WE N SDF+         SI FLK
Subjt:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK

Query:  DHGLDFDKLKKEGI----FARSFLPIV-RNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL
        ++GLD DK+++EGI    F   F  I+   +G  RW+TF G YD  YLLK +   + LPE+  EF   V   +G  V D+K M+  C GL   + GL+R+
Subjt:  DHGLDFDKLKKEGI----FARSFLPIV-RNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL

Query:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDI
          +L  +R G  H+AGSDS LTA + TK+   FD+
Subjt:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDI

Q9C6M9 Putative CCR4-associated factor 1 homolog 46.3e-4039.74Show/hide
Query:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK
        +VW  N   E+  +  C+K  + ++IDTEFPG +K++P    +E  Y D +FNV+ T ++QLG T  D  G I  +WE N SDF+         SI FLK
Subjt:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK

Query:  DHGLDFDKLKKEGI----FARSFLPIVR-NNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL
         +GL+ DK+ +EGI    F R F  I++  +G   W+ F G YD  YL+K +   + LPE+  EF   V   +G  V D+K ++  C GL   + GL+R+
Subjt:  DHGLDFDKLKKEGI----FARSFLPIVR-NNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL

Query:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKM
          +L  KR G  H+AGSDS LTA + TK+
Subjt:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 83.1e-3939.73Show/hide
Query:  ISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLKDHGLDFDKLK
        +S +  C++ +  ++IDTEFP  ++++     DE+ Y D  F+V++ K++QLGLT  D +G I  +WE NFSDF  + DA    SI FL+ +GLD  K++
Subjt:  ISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLKDHGLDFDKLK

Query:  KEGI-----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGKLGLERLCQLLHQKRFGS
        +EGI     F+  F  + +      W+TFHG YDI YLLK     E LP +   F++ V   +G V DLK M+  CEGL   +LGLE L       R G+
Subjt:  KEGI-----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGKLGLERLCQLLHQKRFGS

Query:  KHNAGSDSLLTAMLHTKMFRYFDI
         H+AGS++ LTAM+  K+   F +
Subjt:  KHNAGSDSLLTAMLHTKMFRYFDI

Q9SFX6 Putative CCR4-associated factor 1 homolog 32.8e-4039.74Show/hide
Query:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK
        +VW  N   E++ +  C+K  + ++IDTEFPG +K++P    +E  Y D +FNV+ T ++QLG T  D  G  + +WE N SDFD         SI FLK
Subjt:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK

Query:  DHGLDFDKLKKEGI----FARSFLPIV-RNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL
         +GL+ DK+++EGI    F R F  I+   +G   W+ F G YD  YL+K +   + LPE+  EF   V   +G  V D+K ++  C GL   + GL+R+
Subjt:  DHGLDFDKLKKEGI----FARSFLPIV-RNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL

Query:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKM
          +L  KR G  H+AGSDS LTA + TK+
Subjt:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 15.1e-4238.06Show/hide
Query:  RQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFL
        R+VW  N   E++ +  C+K   +++ DTE+PG I ++ +    ++ Y   + NV  TK++Q G T  +  G I   WE NFS+F   +D     SI FL
Subjt:  RQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFL

Query:  KDHGLDFDKLKKEGI--FARSFLP----IVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGKLGLER
        + HGLD  K++ EG+  F   F P    + R+     ++TF G YD  Y L  +    KLPE+ GEFA  VV   G V D K M+ FCEGL +  LGL +
Subjt:  KDHGLDFDKLKKEGI--FARSFLP----IVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGKLGLER

Query:  LCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYG
        L QLL   R G  H+AGSDSL+TA++  K+   ++ +     G +YG
Subjt:  LCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYG

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.6e-4338.06Show/hide
Query:  RQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFL
        R+VW  N   E++ +  C+K   +++ DTE+PG I ++ +    ++ Y   + NV  TK++Q G T  +  G I   WE NFS+F   +D     SI FL
Subjt:  RQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFL

Query:  KDHGLDFDKLKKEGI--FARSFLP----IVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGKLGLER
        + HGLD  K++ EG+  F   F P    + R+     ++TF G YD  Y L  +    KLPE+ GEFA  VV   G V D K M+ FCEGL +  LGL +
Subjt:  KDHGLDFDKLKKEGI--FARSFLP----IVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGKLGLER

Query:  LCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYG
        L QLL   R G  H+AGSDSL+TA++  K+   ++ +     G +YG
Subjt:  LCQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYG

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-4139.74Show/hide
Query:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK
        +VW  N   E++ +  C+K  + ++IDTEFPG +K++P    +E  Y D +FNV+ T ++QLG T  D  G  + +WE N SDFD         SI FLK
Subjt:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK

Query:  DHGLDFDKLKKEGI----FARSFLPIV-RNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL
         +GL+ DK+++EGI    F R F  I+   +G   W+ F G YD  YL+K +   + LPE+  EF   V   +G  V D+K ++  C GL   + GL+R+
Subjt:  DHGLDFDKLKKEGI----FARSFLPIV-RNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL

Query:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKM
          +L  KR G  H+AGSDS LTA + TK+
Subjt:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.5e-4139.74Show/hide
Query:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK
        +VW  N   E+  +  C+K  + ++IDTEFPG +K++P    +E  Y D +FNV+ T ++QLG T  D  G I  +WE N SDF+         SI FLK
Subjt:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK

Query:  DHGLDFDKLKKEGI----FARSFLPIVR-NNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL
         +GL+ DK+ +EGI    F R F  I++  +G   W+ F G YD  YL+K +   + LPE+  EF   V   +G  V D+K ++  C GL   + GL+R+
Subjt:  DHGLDFDKLKKEGI----FARSFLPIVR-NNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL

Query:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKM
          +L  KR G  H+AGSDS LTA + TK+
Subjt:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKM

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-4341.28Show/hide
Query:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK
        +VW  N   E++ +  C+K  N ++IDTEFPG +K++P    DE  Y D +FNV+ T ++QLGLT   +   I  +WE N SDF+         SI FLK
Subjt:  QVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLK

Query:  DHGLDFDKLKKEGI----FARSFLPIV-RNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL
        ++GLD DK+++EGI    F   F  I+   +G  RW+TF G YD  YLLK +   + LPE+  EF   V   +G  V D+K M+  C GL   + GL+R+
Subjt:  DHGLDFDKLKKEGI----FARSFLPIV-RNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVG-IVRDLKHMSRFCEGLQQGKLGLERL

Query:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDI
          +L  +R G  H+AGSDS LTA + TK+   FD+
Subjt:  CQLLHQKRFGSKHNAGSDSLLTAMLHTKMFRYFDI

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.2e-4039.73Show/hide
Query:  ISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLKDHGLDFDKLK
        +S +  C++ +  ++IDTEFP  ++++     DE+ Y D  F+V++ K++QLGLT  D +G I  +WE NFSDF  + DA    SI FL+ +GLD  K++
Subjt:  ISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPSSITFLKDHGLDFDKLK

Query:  KEGI-----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGKLGLERLCQLLHQKRFGS
        +EGI     F+  F  + +      W+TFHG YDI YLLK     E LP +   F++ V   +G V DLK M+  CEGL   +LGLE L       R G+
Subjt:  KEGI-----FARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGKLGLERLCQLLHQKRFGS

Query:  KHNAGSDSLLTAMLHTKMFRYFDI
         H+AGS++ LTAM+  K+   F +
Subjt:  KHNAGSDSLLTAMLHTKMFRYFDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGAAGAAATGGAATTGGAAGGGGAAATAACCAAGAAATTCGACAAGTTTGGGCTCACAATTTTGGTAATGAAATTTCCCACCTCAATCATTGTGTTAAATTTCA
CAATATTCTCTCCATCGACACTGAATTTCCTGGATTCATTAAGCAGAGTCCATGGGGTTGGATGGACGAACAACTCTATGCAGATTTTCGATTTAATGTTAACCAAACCA
AAGTGGTCCAATTGGGATTGACAGCCATGGATGAATCAGGGAACATCCGCTGCTCGTGGGAGTTCAACTTCTCCGACTTCGATCCCGAAACCGACGCTCACACCCCGTCC
TCGATTACGTTTCTCAAAGATCACGGGCTCGATTTCGACAAGTTAAAGAAAGAAGGAATATTTGCACGTAGCTTCTTACCGATCGTTCGAAATAATGGGATTTGCAGATG
GATCACATTCCACGGATTATACGATATCGGGTATCTTTTAAAGGCGATGGGCGTCATCGAGAAGTTGCCCGAATCAATGGGAGAATTTGCTAGGATAGTTGTGAATGAAG
TTGGTATAGTGAGGGACTTGAAGCATATGTCAAGATTTTGTGAAGGCCTTCAACAAGGGAAGTTAGGACTTGAAAGATTGTGCCAATTGTTGCATCAAAAACGGTTTGGA
TCGAAGCATAATGCGGGATCGGATAGTTTATTAACGGCTATGCTTCATACAAAGATGTTTCGATACTTCGATATCGAACCCGAAATTTGTGACGGATTTTTGTATGGCTT
CTCTCATAAATTGGAGTTAATGGATATGTATCAAAACCAAAATTTTAGATTGGTCTATCAATCTCCAGTTTATTATGGACCTTGTTACCTGCATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGAAGAAATGGAATTGGAAGGGGAAATAACCAAGAAATTCGACAAGTTTGGGCTCACAATTTTGGTAATGAAATTTCCCACCTCAATCATTGTGTTAAATTTCA
CAATATTCTCTCCATCGACACTGAATTTCCTGGATTCATTAAGCAGAGTCCATGGGGTTGGATGGACGAACAACTCTATGCAGATTTTCGATTTAATGTTAACCAAACCA
AAGTGGTCCAATTGGGATTGACAGCCATGGATGAATCAGGGAACATCCGCTGCTCGTGGGAGTTCAACTTCTCCGACTTCGATCCCGAAACCGACGCTCACACCCCGTCC
TCGATTACGTTTCTCAAAGATCACGGGCTCGATTTCGACAAGTTAAAGAAAGAAGGAATATTTGCACGTAGCTTCTTACCGATCGTTCGAAATAATGGGATTTGCAGATG
GATCACATTCCACGGATTATACGATATCGGGTATCTTTTAAAGGCGATGGGCGTCATCGAGAAGTTGCCCGAATCAATGGGAGAATTTGCTAGGATAGTTGTGAATGAAG
TTGGTATAGTGAGGGACTTGAAGCATATGTCAAGATTTTGTGAAGGCCTTCAACAAGGGAAGTTAGGACTTGAAAGATTGTGCCAATTGTTGCATCAAAAACGGTTTGGA
TCGAAGCATAATGCGGGATCGGATAGTTTATTAACGGCTATGCTTCATACAAAGATGTTTCGATACTTCGATATCGAACCCGAAATTTGTGACGGATTTTTGTATGGCTT
CTCTCATAAATTGGAGTTAATGGATATGTATCAAAACCAAAATTTTAGATTGGTCTATCAATCTCCAGTTTATTATGGACCTTGTTACCTGCATTATTAG
Protein sequenceShow/hide protein sequence
MGRRNGIGRGNNQEIRQVWAHNFGNEISHLNHCVKFHNILSIDTEFPGFIKQSPWGWMDEQLYADFRFNVNQTKVVQLGLTAMDESGNIRCSWEFNFSDFDPETDAHTPS
SITFLKDHGLDFDKLKKEGIFARSFLPIVRNNGICRWITFHGLYDIGYLLKAMGVIEKLPESMGEFARIVVNEVGIVRDLKHMSRFCEGLQQGKLGLERLCQLLHQKRFG
SKHNAGSDSLLTAMLHTKMFRYFDIEPEICDGFLYGFSHKLELMDMYQNQNFRLVYQSPVYYGPCYLHY