CuGenDBv2

Gene ID	Sed0001180
Organism	Sechium edule (Chayote v1)
Description	Transcription initiation factor IIE subunit beta
Genome location	LG13:6317229..6320940
RNA-Seq Expression	Sed0001180
Synteny	Sed0001180
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0005673 - transcription factor TFIIE complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function)
InterPro domains	IPR003166 - Transcription factor TFIIE beta subunit, DNA-binding domain IPR016656 - Transcription initiation factor TFIIE, beta subunit IPR040501 - TFA2, Winged helix domain 2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008452012.1 PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo]

7.5e-133

90.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SK TPKFTP PA+S+ARP  PAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNN KVH+DGRRFSYKSKHDLKDK QLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        VDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ QH+ASSKPKPKKKKQEISKRTKLTNAHLPELFK
Subjt:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

XP_011653191.1 general transcription factor IIE subunit 2 [Cucumis sativus]

6.8e-134

90.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SK TPKFTP PA+S+ARPP PAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNN KVH+DGRRFSYKSKHDLKDK QLLYL+RKFPEGIAVIDLKD+YP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        VDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ QH+ASSKPKPKKKKQEISKRTKLTNAHLPELFK
Subjt:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

XP_022931511.1 general transcription factor IIE subunit 2-like [Cucurbita moschata]

1.8e-131

90.18

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASK---PTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACY
        MALQEKLDRFK+QQERCQTTL+GIAASK    TP+FTP PA+S  RPP PA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINE+CY
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASK---PTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACY

Query:  VDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKV
        VD+NSNKAVFDSLRNN KVH+DGRRFSYKSKHDLKDK QLLYLIRKFPEGIAVIDLKDSYP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIKV
Subjt:  VDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKV

Query:  DDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        DDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ Q++ASSKPKPKKKKQEISKRTKLTNAHLPELFK
Subjt:  DDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

XP_022984812.1 general transcription factor IIE subunit 2-like [Cucurbita maxima]

8.3e-132

90.55

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Query:  MALQEKLDRFKKQQERCQTTLTGIAASK---PTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACY
        MALQEKLDRFK+QQERCQTTL+GIAASK    TP+FTP PA+S  RPP PA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINEACY
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASK---PTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACY

Query:  VDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKV
        VD+NSNKAVFDSLRNN KVH+DGRRFSYKSKHDLKDK QLLYLIRKFPEGIAVIDLKDSYP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIKV
Subjt:  VDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKV

Query:  DDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        DDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ Q++ASSKPKPKKKKQEISKRTKLTNAHLPELFK
Subjt:  DDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

XP_038906431.1 general transcription factor IIE subunit 2-like [Benincasa hispida]

2.4e-131

90.58

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Query:  MALQEKLDRFKKQQERCQTTLTGIA----ASKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC
        MALQE+LDRFKKQQERCQTTL+GIA    ASK TPKFTP PA+S  RPP PAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIA----ASKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAVFDSLRNN KVH+DGRRFSYKSKHDLKDK QLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        VDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ QH+ASSKPK KKKKQEISKRTKLTNAHLPELFK
Subjt:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWU5 Transcription initiation factor IIE subunit beta

3.3e-134

90.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SK TPKFTP PA+S+ARPP PAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNN KVH+DGRRFSYKSKHDLKDK QLLYL+RKFPEGIAVIDLKD+YP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        VDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ QH+ASSKPKPKKKKQEISKRTKLTNAHLPELFK
Subjt:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

A0A1S3BS95 Transcription initiation factor IIE subunit beta

3.6e-133

90.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SK TPKFTP PA+S+ARP  PAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNN KVH+DGRRFSYKSKHDLKDK QLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        VDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ QH+ASSKPKPKKKKQEISKRTKLTNAHLPELFK
Subjt:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

A0A5A7TNR4 Transcription initiation factor IIE subunit beta

3.6e-133

90.22

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC
        MALQE+LDRFKKQQERCQ+TL+GIAA    SK TPKFTP PA+S+ARP  PAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINEAC
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAA----SKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEAC

Query:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK
        YVD+NSNKAV+DSLRNN KVH+DGRRFSYKSKHDLKDK QLLYLIRKFPEGIAVIDLKD+YP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIK
Subjt:  YVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIK

Query:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        VDDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ QH+ASSKPKPKKKKQEISKRTKLTNAHLPELFK
Subjt:  VDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

A0A6J1ETU7 Transcription initiation factor IIE subunit beta

8.9e-132

90.18

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASK---PTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACY
        MALQEKLDRFK+QQERCQTTL+GIAASK    TP+FTP PA+S  RPP PA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINE+CY
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASK---PTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACY

Query:  VDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKV
        VD+NSNKAVFDSLRNN KVH+DGRRFSYKSKHDLKDK QLLYLIRKFPEGIAVIDLKDSYP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIKV
Subjt:  VDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKV

Query:  DDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        DDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ Q++ASSKPKPKKKKQEISKRTKLTNAHLPELFK
Subjt:  DDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

A0A6J1J372 Transcription initiation factor IIE subunit beta

4.0e-132

90.55

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASK---PTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACY
        MALQEKLDRFK+QQERCQTTL+GIAASK    TP+FTP PA+S  RPP PA+KFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQ+FTPEQINEACY
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASK---PTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACY

Query:  VDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKV
        VD+NSNKAVFDSLRNN KVH+DGRRFSYKSKHDLKDK QLLYLIRKFPEGIAVIDLKDSYP+VMEDLQ+LKASGQ+WLLSNFDSQEDIAYPNDPRIQIKV
Subjt:  VDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKV

Query:  DDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK
        DDDLKQ FREIELPRDMLDVEKDLQKNGMKPATNTAKRRA+ Q++ASSKPKPKKKKQEISKRTKLTNAHLPELFK
Subjt:  DDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFK

SwissProt top hits

e value

%identity

Alignment

P79011 Transcription initiation factor IIE subunit beta

1.8e-12

29.27

Show/hide

Query:  AQIKRVIDLLLETRQSFTPEQINEACYVDVNSNKAVFDSLRNNLKVHFDGRR--FSYKSKHDLKDKTQLLYLI--RKFPEGIAVIDLKDSYPNVMEDLQS
        +Q+   ++ L E  +  T E+I  A Y+       + + L+ N ++++D R   F++K  H+++    LL  +  +K   G+++ +L+D +PNV  +L+ 
Subjt:  AQIKRVIDLLLETRQSFTPEQINEACYVDVNSNKAVFDSLRNNLKVHFDGRR--FSYKSKHDLKDKTQLLYLI--RKFPEGIAVIDLKDSYPNVMEDLQS

Query:  LKASGQLWLL-SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPAT---NTAKRRASEQHMASSKPKPKKKKQEISKRTKL
        L+  G++ LL +  D    + + ND      VD + +Q + EI +P   LD+  +L K G+KP +   +T KR    Q      PK KK K   ++R K+
Subjt:  LKASGQLWLL-SNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPAT---NTAKRRASEQHMASSKPKPKKKKQEISKRTKL

Query:  TNAHL
        TN HL
Subjt:  TNAHL

Q54KJ8 General transcription factor IIE subunit 2

7.3e-14

26.77

Show/hide

Query:  FKKQQERCQTTLTGI--------AASKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLL--LETRQSFTPEQINEACYVD
        FK+ Q +   TL  I        +A K  PK +    SS A       + S  T        +++ P    +  +++ L  LE   + T E ++   ++ 
Subjt:  FKKQQERCQTTLTGI--------AASKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLL--LETRQSFTPEQINEACYVD

Query:  VNSNKAVFDSLRNNLKVHFDGR-RFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKVD
        ++    + + LRNN K+   G  RFS+K K +++ +  +L L+  +P GI V +L +SY N   D++ LK + Q++ +   +S  DI +PND R+++ + 
Subjt:  VNSNKAVFDSLRNNLKVHFDGR-RFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHL
         +L   ++ I+LP +  D+EK+++  G+    +    R ++    S+K K ++KK    + TK+TN H+
Subjt:  DDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHL

Arabidopsis top hits

e value

%identity

Alignment

AT4G20330.1 Transcription initiation factor TFIIE, beta subunit

6.8e-92

65.23

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASKPTPKFTP-----PPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEA
        MAL+E+LD+F KQQ +CQ+TL+ IA+S+     +      P A +  +P    VKFS+DTERLQ+IN+IRK+PVGAQIKRVIDLL E R + TPEQINE 
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASKPTPKFTP-----PPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEA

Query:  CYVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQI
        C+VD+++NKAVFDSLR N K H+DGRRFSYK+ HD+ DK QLL L+RK+ +GIAV+DLKD+YPNVMEDL++L ASG ++LLSN  SQEDIAYPND + +I
Subjt:  CYVDVNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQI

Query:  KVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQ-HMASSKPK-PKKKKQEISKRTKLTNAHLPELFK
        KVDD+ K  FR+I +P DMLDVEK+L K G+KPATNTA+RRA+ Q H  S+KPK  KKKKQEISKRTKLTNAHLPELF+
Subjt:  KVDDDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQ-HMASSKPK-PKKKKQEISKRTKLTNAHLPELFK

AT4G21010.1 Transcription initiation factor TFIIE, beta subunit

7.3e-78

59.06

Show/hide

Query:  MALQEKLDRFKKQQERCQTTLTGIAASKPT-PKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACYVD
        MAL+E+LD+F KQQE+CQ+TL+ I++S+    +   P A++  +P V   KFS +T++LQHI +IR S VGAQ+K VIDLL +TR ++T EQINEACYVD
Subjt:  MALQEKLDRFKKQQERCQTTLTGIAASKPT-PKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACYVD

Query:  VNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQL-WLLSNFDSQEDIAYPNDPRIQIKVD
        +++NKAVFDSLR N KVH+DGRRFSYK+ H++KDK QLL  + K  + I V DLKD+YPNVMEDL+SLK+SG++ WLLSN DS+E   Y N+     K+D
Subjt:  VNSNKAVFDSLRNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQL-WLLSNFDSQEDIAYPNDPRIQIKVD

Query:  DDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQ-HMASSKPK-PKKKKQEISKRTKLTNAHLPELFK
        D+LK  FR+I +P DML+VEK+L K G+KPATN A+RRA+EQ H  S+KPK  KKKK+EI+ RTKLTN+H+ ELF+
Subjt:  DDLKQFFREIELPRDMLDVEKDLQKNGMKPATNTAKRRASEQ-HMASSKPK-PKKKKQEISKRTKLTNAHLPELFK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTTGCAAGAAAAGCTTGATAGGTTTAAGAAACAACAAGAGAGATGCCAGACTACATTGACCGGCATTGCTGCATCCAAGCCTACGCCTAAGTTTACGCCCCCGCC
GGCTTCTTCCGTGGCCCGACCTCCGGTTCCTGCCGTTAAATTCTCTAATGATACTGAGAGGCTTCAGCATATTAACAGTATCAGAAAATCCCCTGTTGGGGCTCAGATCA
AGAGGGTTATTGACCTGCTGCTTGAGACAAGGCAATCCTTTACACCAGAGCAAATCAATGAGGCATGTTATGTTGATGTAAATTCAAACAAAGCCGTTTTCGATAGTCTG
CGGAATAACCTAAAAGTTCACTTCGATGGGAGGCGTTTCTCATACAAGTCAAAGCATGATCTAAAGGATAAGACTCAACTCCTTTACTTGATACGGAAATTTCCAGAAGG
CATTGCTGTCATTGATCTCAAGGATTCTTATCCAAACGTTATGGAAGACTTGCAATCGCTAAAAGCCTCAGGCCAGCTTTGGCTTCTCTCAAACTTCGATTCTCAAGAAG
ATATCGCATACCCAAATGACCCAAGAATTCAAATCAAGGTAGACGACGATCTAAAGCAATTCTTTCGGGAGATCGAGTTACCTCGTGACATGCTCGATGTTGAGAAGGAT
CTTCAGAAGAATGGGATGAAGCCTGCAACCAACACTGCAAAGAGGCGAGCGAGTGAACAACACATGGCATCCTCAAAGCCGAAGCCGAAGAAAAAGAAGCAGGAGATCAG
CAAGAGGACCAAGCTCACCAATGCACATCTTCCTGAGCTCTTTAAAAAATAG

mRNA sequence

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AAATAATAGGCTTAGGCCACAATTCCAAGTTCCAATCTTCCCAAATTCACAAAACTTGTTTCTCCCTTTCTCTCGCACTTTCCCAATTCCAGAAACTCGATTTTGTACAC
TACGGATTGCAATTTCTGCTATTCTACTTGCTACCCTTTTCGTTTCAAGGGTTGAGAATTGAAGCGGGCGAGGGGGGTTTTCGATGGCGTTGCAAGAAAAGCTTGATAGG
TTTAAGAAACAACAAGAGAGATGCCAGACTACATTGACCGGCATTGCTGCATCCAAGCCTACGCCTAAGTTTACGCCCCCGCCGGCTTCTTCCGTGGCCCGACCTCCGGT
TCCTGCCGTTAAATTCTCTAATGATACTGAGAGGCTTCAGCATATTAACAGTATCAGAAAATCCCCTGTTGGGGCTCAGATCAAGAGGGTTATTGACCTGCTGCTTGAGA
CAAGGCAATCCTTTACACCAGAGCAAATCAATGAGGCATGTTATGTTGATGTAAATTCAAACAAAGCCGTTTTCGATAGTCTGCGGAATAACCTAAAAGTTCACTTCGAT
GGGAGGCGTTTCTCATACAAGTCAAAGCATGATCTAAAGGATAAGACTCAACTCCTTTACTTGATACGGAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAGGATTC
TTATCCAAACGTTATGGAAGACTTGCAATCGCTAAAAGCCTCAGGCCAGCTTTGGCTTCTCTCAAACTTCGATTCTCAAGAAGATATCGCATACCCAAATGACCCAAGAA
TTCAAATCAAGGTAGACGACGATCTAAAGCAATTCTTTCGGGAGATCGAGTTACCTCGTGACATGCTCGATGTTGAGAAGGATCTTCAGAAGAATGGGATGAAGCCTGCA
ACCAACACTGCAAAGAGGCGAGCGAGTGAACAACACATGGCATCCTCAAAGCCGAAGCCGAAGAAAAAGAAGCAGGAGATCAGCAAGAGGACCAAGCTCACCAATGCACA
TCTTCCTGAGCTCTTTAAAAAATAGAGAAAAAAAGCCTATATGCTCAGATGTAGGCTCAGAGGCAACAATATAAAGTTTATGCAGTCAATGAACTCTGTAGATAGCATAG
CACTCTCCATCACTTGTGTTTGATGCATTGTTTGTTTATTTTCATGAGATCACACTAAAGAATTAAATGCTCCTAAGGTTACTCTTATGGCCCTGCTTTTACTTTCAAAA
TAATGGAACAGTGAAATACAAGAAATAGGTTCAATTGGAAAACCTTATGCTTTCTGTTTCTATTGTTTGAAGTGAAGTTGATTTTAGAAGAATTGACATGTGCATTACTT
CAATTACTTTTCACCGTCC

Protein sequence

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MALQEKLDRFKKQQERCQTTLTGIAASKPTPKFTPPPASSVARPPVPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQSFTPEQINEACYVDVNSNKAVFDSL
RNNLKVHFDGRRFSYKSKHDLKDKTQLLYLIRKFPEGIAVIDLKDSYPNVMEDLQSLKASGQLWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQFFREIELPRDMLDVEKD
LQKNGMKPATNTAKRRASEQHMASSKPKPKKKKQEISKRTKLTNAHLPELFKK

Sed0001180 (gene) of Chayote v1 genome