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Sed0001206 (gene) of Chayote v1 genome

Gene IDSed0001206
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:30603130..30603579
RNA-Seq ExpressionSed0001206
SyntenySed0001206
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586353.1 hypothetical protein SDJN03_19086, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2464.22Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLA----SASPPSSPLARISSPPAAALADDNGA
        MAADG+ R VYEACIAGCDSEIHRRPYHRNCGCALH   R+  HC HS    SVSY IRRSWSEGS TLA    S+SP SSP+    S P AAL+DD+  
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLA----SASPPSSPLARISSPPAAALADDNGA

Query:  DSPSRLART
        D+P +  R+
Subjt:  DSPSRLART

XP_016901708.1 PREDICTED: uncharacterized protein LOC103499614 [Cucumis melo]2.1e-2462.96Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRRR---PHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA
        MAADGL R VYEACIAGCDSEIHRRPYHRNC CALH+ R   PHC HS  S S+SY IRRSWSEG  +L    AS+SP +SP+   +S P AAL++D+  
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRRR---PHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA

Query:  DSPSRLAR
        D+P   AR
Subjt:  DSPSRLAR

XP_022938303.1 uncharacterized protein LOC111444438 [Cucurbita moschata]9.6e-2564.22Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLA----SASPPSSPLARISSPPAAALADDNGA
        MAADG+ R VYEACIAGCDSEIHRRPYHRNCGCALH   R+  HC HS    SVSY IRRSWSEG  TLA    S+SP SSP+   SS P AAL+DD+  
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLA----SASPPSSPLARISSPPAAALADDNGA

Query:  DSPSRLART
        D+P +  R+
Subjt:  DSPSRLART

XP_022965412.1 uncharacterized protein LOC111465326 [Cucurbita maxima]9.6e-2565.71Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLASASPPSSPLARISSPPAAALADDNGADSPS
        MAADG+ R VYEACIAGCDSEIHRRPYHRNCGCALH   R+  HC HS    SV Y IRRSWSEG  TLA ASP SSP+   SS P AAL+DD+  D+P 
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLASASPPSSPLARISSPPAAALADDNGADSPS

Query:  RLART
        +  R+
Subjt:  RLART

XP_038889376.1 uncharacterized protein LOC120079294 [Benincasa hispida]1.3e-2666.67Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRRR---PHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA
        MAADGL R VYEACIAGCDSEIHRRPYHRNCGCALH+ R   PHC HS  S S+SY IRRSWSEG  TL    AS+SP SSP+   +S P AAL+DD+  
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRRR---PHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA

Query:  DSPSRLAR
        D+P   AR
Subjt:  DSPSRLAR

TrEMBL top hitse value%identityAlignment
A0A0A0LI78 Uncharacterized protein1.5e-2362.96Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA
        MAADGL R +YEACI GCDSEIHRRPYHRNCGCALH   R+ PHC HS  S S+SY IRRSWSEG  +L    AS+SP SSP+   +S P A L++D+  
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA

Query:  DSPSRLAR
        DSP   AR
Subjt:  DSPSRLAR

A0A1S4E0F4 uncharacterized protein LOC1034996141.0e-2462.96Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRRR---PHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA
        MAADGL R VYEACIAGCDSEIHRRPYHRNC CALH+ R   PHC HS  S S+SY IRRSWSEG  +L    AS+SP +SP+   +S P AAL++D+  
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRRR---PHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA

Query:  DSPSRLAR
        D+P   AR
Subjt:  DSPSRLAR

A0A6J1FII0 uncharacterized protein LOC1114444384.6e-2564.22Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLA----SASPPSSPLARISSPPAAALADDNGA
        MAADG+ R VYEACIAGCDSEIHRRPYHRNCGCALH   R+  HC HS    SVSY IRRSWSEG  TLA    S+SP SSP+   SS P AAL+DD+  
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLA----SASPPSSPLARISSPPAAALADDNGA

Query:  DSPSRLART
        D+P +  R+
Subjt:  DSPSRLART

A0A6J1HKA0 uncharacterized protein LOC1114653264.6e-2565.71Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLASASPPSSPLARISSPPAAALADDNGADSPS
        MAADG+ R VYEACIAGCDSEIHRRPYHRNCGCALH   R+  HC HS    SV Y IRRSWSEG  TLA ASP SSP+   SS P AAL+DD+  D+P 
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH---RRRPHCLHSPSSSSVSYSIRRSWSEGSFTLASASPPSSPLARISSPPAAALADDNGADSPS

Query:  RLART
        +  R+
Subjt:  RLART

A0A6J1KE46 uncharacterized protein LOC1114935291.1e-2362.04Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRRR---PHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA
        MAADGL R VYEACIAGCD+EI RRPYHRNCGCALH+ R   P C HS  S S+ Y IRRSWSEG   L    AS+SP SSP+   +S P  AL+DD+  
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRRR---PHCLHSPSSSSVSYSIRRSWSEGSFTL----ASASPPSSPLARISSPPAAALADDNGA

Query:  DSPSRLAR
        D+P +LAR
Subjt:  DSPSRLAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46490.1 unknown protein1.4e-1849.58Show/hide
Query:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH------------RRRPHCLHSPSSSSVSYSIRRSWSEG---SFTLASASPPSSPLARISSPP--
        MAADG+FRS++E CI+G DS I RRPYH+NCGCALH            RR P C    SS S+S+ IRRSWSEG   +  L S+S  SS L  +SS    
Subjt:  MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALH------------RRRPHCLHSPSSSSVSYSIRRSWSEG---SFTLASASPPSSPLARISSPP--

Query:  ---AAALADDNGA-DSPSR
           A+ L  DN A + PSR
Subjt:  ---AAALADDNGA-DSPSR

AT5G35110.1 unknown protein2.4e-1346.81Show/hide
Query:  DGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRR------RPHCLHSPSSSSVSYSIRRSWSEG---SFTLASASPPSSPLARISSPPAAALA
        DG+FR+++E CI+ CDS I RRPYH+NCGCALH R         C H   S  V + I+RSWSEG   +  LAS+S  S+  +  SS   + LA
Subjt:  DGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRR------RPHCLHSPSSSSVSYSIRRSWSEG---SFTLASASPPSSPLARISSPPAAALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCGACGGCCTCTTCCGCTCCGTCTACGAGGCCTGCATCGCCGGCTGCGACTCCGAGATCCACCGCCGCCCCTACCACCGCAACTGCGGCTGCGCTCTCCACCG
CCGCCGCCCTCACTGCCTCCACTCCCCCTCCTCCTCCTCCGTCTCCTACTCCATCCGCCGATCCTGGAGCGAAGGCTCCTTCACCCTCGCCTCTGCCTCCCCTCCCTCCT
CCCCTCTCGCCCGCATCTCCTCCCCCCCTGCCGCCGCTCTCGCCGACGACAACGGCGCCGACTCTCCTTCTCGCCTTGCCAGGACCTGA
mRNA sequenceShow/hide mRNA sequence
AACACCTTCCTCCGCTCCCATGGCAGCCGACGGCCTCTTCCGCTCCGTCTACGAGGCCTGCATCGCCGGCTGCGACTCCGAGATCCACCGCCGCCCCTACCACCGCAACT
GCGGCTGCGCTCTCCACCGCCGCCGCCCTCACTGCCTCCACTCCCCCTCCTCCTCCTCCGTCTCCTACTCCATCCGCCGATCCTGGAGCGAAGGCTCCTTCACCCTCGCC
TCTGCCTCCCCTCCCTCCTCCCCTCTCGCCCGCATCTCCTCCCCCCCTGCCGCCGCTCTCGCCGACGACAACGGCGCCGACTCTCCTTCTCGCCTTGCCAGGACCTGAGA
TCAGTTTCATTCTTCTCCTTCTTTTAGGTTTTTCTCCATTTTCCTGCCCTAGGTTTTCAATGAAATTGGAAATCACACGAGGCGATATTGTCCTTCCTTTCTTTTTTTGT
TGTTAGTTGC
Protein sequenceShow/hide protein sequence
MAADGLFRSVYEACIAGCDSEIHRRPYHRNCGCALHRRRPHCLHSPSSSSVSYSIRRSWSEGSFTLASASPPSSPLARISSPPAAALADDNGADSPSRLART