; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001211 (gene) of Chayote v1 genome

Gene IDSed0001211
OrganismSechium edule (Chayote v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationContig00306_ERROPOS2061915:59586..63522
RNA-Seq ExpressionSed0001211
SyntenySed0001211
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605088.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.6e-13089.45Show/hide
Query:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD
        MV ASAF ASL  SV+SHNR SS+PQ S RNS RSIVS++PR YGDSSTIGLSSKT G P+NL D DFLHTSTSYGPI+A KKGNPPIMP VMTP GPL+
Subjt:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD

Query:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
        LSSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE +DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
Subjt:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR

Query:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQ+TERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

XP_008457934.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo]7.1e-13189.45Show/hide
Query:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD
        MV AS F ASL+ SV S NRTSS+PQ SRR S RSIVS+LPR YGDSSTIGLSSKTNG P+NL+D+DFL TSTSYGPI A +KGNPPIMP VMTP GPLD
Subjt:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD

Query:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
        LSSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE+ADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
Subjt:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR

Query:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ +EKVQQ+TERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]3.2e-13189.82Show/hide
Query:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD
        MV ASAF ASL  SV+SHNR SS+PQ SRRNS RSIVS++PR YGDSSTIGLSSKT G P+NL D DFLHTSTSYGPI+A KKGNPPIMP VMTP GPL+
Subjt:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD

Query:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
        LSSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE +DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
Subjt:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR

Query:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQ+TERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

XP_023007112.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita maxima]1.4e-13189.82Show/hide
Query:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD
        M  ASAF ASL  SV+SHNR SS+PQ SRRNS RSIVS++PR YGDSSTIGLSSKT GTP+NL D DFLHTSTSYGPI+A KKGNPPIMP VMTP GPL+
Subjt:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD

Query:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
        LSSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE +DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
Subjt:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR

Query:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQ+TERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]9.9e-13389.45Show/hide
Query:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD
        M  ASAF ASLS SV+SHNRTSS+ Q SRRNS RSIVS+LPR YGDSSTIGLSSKT G P++++D+DFLHTSTSYGPI A +KGNPPIMP VMTP GPLD
Subjt:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD

Query:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
        LSSVLFRNRIIFIGQP+NSIVAQRVISQLVTLATIDE+ADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
Subjt:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR

Query:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        IMIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQP+EKVQQ+TERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

TrEMBL top hitse value%identityAlignment
A0A0A0LLX4 ATP-dependent Clp protease proteolytic subunit6.9e-12483.64Show/hide
Query:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD
        MV AS F ASLS SV S+NR SS+ Q SRRNS RSIVS+ PR YGDSSTIGLSSKTNG P+NL+D+DFL TSTSY PIVA ++ NPP+MP VMTP GPLD
Subjt:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD

Query:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
        LSSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE+ADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSR
Subjt:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR

Query:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        IMIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ +E +QQ+ +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit3.4e-13189.45Show/hide
Query:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD
        MV AS F ASL+ SV S NRTSS+PQ SRR S RSIVS+LPR YGDSSTIGLSSKTNG P+NL+D+DFL TSTSYGPI A +KGNPPIMP VMTP GPLD
Subjt:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD

Query:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
        LSSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE+ADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
Subjt:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR

Query:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ +EKVQQ+TERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit5.5e-12987.59Show/hide
Query:  VAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLDL
        +AASAF ASL+ SV+S+NRTSS+P  SRRNS RS+VS+LPR YGDSSTIGLSSK+   P++L+D+DFLH STSY PI A KKGNPPIMP VMTP GPLDL
Subjt:  VAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLDL

Query:  SSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NSIVAQRVISQLVTLATIDE+ADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQP+EKVQQ+TERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit1.5e-13189.82Show/hide
Query:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD
        MV ASAF ASL  SV+SHNR SS+PQ SRRNS RSIVS++PR YGDSSTIGLSSKT G P+NL D DFLHTSTSYGPI+A KKGNPPIMP VMTP GPL+
Subjt:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD

Query:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
        LSSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE +DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
Subjt:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR

Query:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQ+TERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit6.9e-13289.82Show/hide
Query:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD
        M  ASAF ASL  SV+SHNR SS+PQ SRRNS RSIVS++PR YGDSSTIGLSSKT GTP+NL D DFLHTSTSYGPI+A KKGNPPIMP VMTP GPL+
Subjt:  MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLD

Query:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
        LSSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE +DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR
Subjt:  LSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSR

Query:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQ+TERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

SwissProt top hitse value%identityAlignment
P54415 ATP-dependent Clp protease proteolytic subunit 14.1e-4147.98Show/hide
Query:  DLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L R RIIF+G+P+ S VA R+++QL+ L   D   DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA LLA G KG R ++ +S
Subjt:  DLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLE
        RIMIHQP  G  G  +D+  Q NE +  +  ++ + A  TGQP+ +++  T+RD F+S SEA+E+GLID V++
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLE

Q317Y6 ATP-dependent Clp protease proteolytic subunit 41.4e-4144.13Show/hide
Query:  INLEDRDFLHTS-TSYGPIVANKKGNPPIMPGVMTPAGPLDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIY
        +N E +  + +S +SY  I       P ++          D+ S L R RIIF+G  IN  V+  +++QL+ L   D   DI +Y+N PGGS  + +AIY
Subjt:  INLEDRDFLHTS-TSYGPIVANKKGNPPIMPGVMTPAGPLDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIY

Query:  DCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVS
        D M  I P V T+CFGVAAS GA LL+GG KG R A+PNSRIMIHQP  G  G   ++  Q  E +  +  ++ + A  TGQP+EK+ + TERD FLS S
Subjt:  DCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVS

Query:  EALEFGLIDGVLE
        EA+E+GLID V++
Subjt:  EALEFGLIDGVLE

Q59993 ATP-dependent Clp protease proteolytic subunit 28.3e-4247.34Show/hide
Query:  IMPGVMTPAG----PLDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+  +G      D+ S L R RIIF+G P++  VA  +++QL+ L   D   DI +Y+N PGGS Y+ LAIYD M  I+P V T+CFG+AAS GA 
Subjt:  IMPGVMTPAG----PLDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVL
        LL+GG KG R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQP+EK+Q+ TERD F+S  EA E+GLID V+
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVL

Q5N665 ATP-dependent Clp protease proteolytic subunit 14.1e-4147.98Show/hide
Query:  DLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+ S L R RIIF+G+P+ S VA R+++QL+ L   D   DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA LLA G KG R ++ +S
Subjt:  DLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLE
        RIMIHQP  G  G  +D+  Q NE +  +  ++ + A  TGQP+ +++  T+RD F+S SEA+E+GLID V++
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLE

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic1.1e-10573.23Show/hide
Query:  PASLSLSVTSHN-RTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLDLSSVLF
        P  LS S  + N + +S    ++RN +R IVS+L   YGDS   GLSS  +G+PI ++++     +  +G I A KKGNPP+MP VMTP GPLDLSSVLF
Subjt:  PASLSLSVTSHN-RTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLDLSSVLF

Query:  RNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQP
        RNRIIFIGQPIN+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQP
Subjt:  RNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQP

Query:  QSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        Q+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQ+TERDRFLS SEALEFGLIDG+LETEY
Subjt:  QSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 51.0e-3944Show/hide
Query:  STSYGPIVANKKGNPPIMPGVMTPAGPLDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGT
        S+ Y P  A  +G PP     M       + S LF+ RII  G  ++  +A  +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P V T
Subjt:  STSYGPIVANKKGNPPIMPGVMTPAGPLDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGT

Query:  VCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVL
        VC G+AAS GA LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   A  TGQ +EK+ Q T+RD F+S  EA E+GLIDGV+
Subjt:  VCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVL

AT1G11750.1 CLP protease proteolytic subunit 67.6e-10773.23Show/hide
Query:  PASLSLSVTSHN-RTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLDLSSVLF
        P  LS S  + N + +S    ++RN +R IVS+L   YGDS   GLSS  +G+PI ++++     +  +G I A KKGNPP+MP VMTP GPLDLSSVLF
Subjt:  PASLSLSVTSHN-RTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLDLSSVLF

Query:  RNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQP
        RNRIIFIGQPIN+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQP
Subjt:  RNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQP

Query:  QSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        Q+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQ+TERDRFLS SEALEFGLIDG+LETEY
Subjt:  QSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

AT1G11750.2 CLP protease proteolytic subunit 69.9e-10770.46Show/hide
Query:  PASLSLSVTSHN-RTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDR----------DFLHTSTSY--GPIVANKKGNPPIMPGVMT
        P  LS S  + N + +S    ++RN +R IVS+L   YGDS   GLSS  +G+PI ++++          + L +ST Y    ++  KKGNPP+MP VMT
Subjt:  PASLSLSVTSHN-RTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDR----------DFLHTSTSY--GPIVANKKGNPPIMPGVMT

Query:  PAGPLDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRY
        P GPLDLSSVLFRNRIIFIGQPIN+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRY
Subjt:  PAGPLDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRY

Query:  AMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY
        AMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQ+TERDRFLS SEALEFGLIDG+LETEY
Subjt:  AMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY

AT1G66670.1 CLP protease proteolytic subunit 32.6e-3843.1Show/hide
Query:  LDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN
        LD +++L R RI+F+G  ++ + A  VISQL+ L   D   DI +++N PGGS  + + IYD M   K  V TVC G+AAS GA LLA G KG RY MPN
Subjt:  LDLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN

Query:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLE
        S++MIHQP    GG   ++  ++ E +  + K++ +++  TG+P  +++  T+RD FL+  EA E+GLID V++
Subjt:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLE

AT5G45390.1 CLP protease P41.8e-3641.62Show/hide
Query:  DLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS
        D+  +L R RI+F+G  I+  VA  ++SQL+ L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG R+AMPN+
Subjt:  DLSSVLFRNRIIFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNS

Query:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLE
        RIMIHQP  G  G   DV  Q  E + +++ V  + A  T +  E+V +  +RDR++S  EA+E+GLIDGV++
Subjt:  RIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCAGCTTCAGCTTTTCCTGCATCTCTCAGTTTATCCGTAACTTCGCACAATCGAACGTCATCCCTTCCTCAATTTTCTCGCAGAAATTCACTCAGGTCGATAGT
TTCTTCCTTGCCGAGGTCCTATGGCGACTCTTCAACTATCGGATTATCGAGTAAAACGAATGGGACACCTATAAACCTTGAAGATAGAGATTTTCTTCACACCAGTACAA
GTTATGGACCTATAGTGGCCAACAAGAAGGGTAATCCACCAATAATGCCTGGAGTAATGACACCGGCAGGGCCTTTGGATCTCTCTTCTGTGTTGTTTAGGAATCGGATC
ATATTTATTGGTCAACCTATCAACTCCATAGTGGCACAGCGAGTCATATCACAGCTTGTGACTCTAGCAACCATTGATGAGAATGCAGATATCCTGGTATATCTGAACTG
CCCTGGTGGAAGTACATACTCTGTATTGGCAATTTATGATTGTATGTCTTGGATAAAGCCCAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGGGCTCTTC
TCCTTGCAGGTGGAGAAAAGGGAATGCGATATGCGATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAAGATGTTAGACGCCAA
GTCAATGAAGCAGTTCAATCACGCCATAAAGTGGACATGATGTATGCTGCATTTACTGGCCAACCTGTAGAGAAAGTACAACAATTCACCGAGCGGGATCGATTTTTGTC
TGTTTCTGAGGCTTTGGAGTTTGGGCTTATCGATGGGGTGCTGGAAACAGAATACTGA
mRNA sequenceShow/hide mRNA sequence
TTCCCTTTTGGGTTCATAGTGAAAGCTCGAAAACTCTGCACCATTCCCACAAGCTTCGCTCGAAAATGGTAGCAGCTTCAGCTTTTCCTGCATCTCTCAGTTTATCCGTA
ACTTCGCACAATCGAACGTCATCCCTTCCTCAATTTTCTCGCAGAAATTCACTCAGGTCGATAGTTTCTTCCTTGCCGAGGTCCTATGGCGACTCTTCAACTATCGGATT
ATCGAGTAAAACGAATGGGACACCTATAAACCTTGAAGATAGAGATTTTCTTCACACCAGTACAAGTTATGGACCTATAGTGGCCAACAAGAAGGGTAATCCACCAATAA
TGCCTGGAGTAATGACACCGGCAGGGCCTTTGGATCTCTCTTCTGTGTTGTTTAGGAATCGGATCATATTTATTGGTCAACCTATCAACTCCATAGTGGCACAGCGAGTC
ATATCACAGCTTGTGACTCTAGCAACCATTGATGAGAATGCAGATATCCTGGTATATCTGAACTGCCCTGGTGGAAGTACATACTCTGTATTGGCAATTTATGATTGTAT
GTCTTGGATAAAGCCCAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGATATGCGATGCCAAATT
CTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAAGATGTTAGACGCCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTGGACATGATGTAT
GCTGCATTTACTGGCCAACCTGTAGAGAAAGTACAACAATTCACCGAGCGGGATCGATTTTTGTCTGTTTCTGAGGCTTTGGAGTTTGGGCTTATCGATGGGGTGCTGGA
AACAGAATACTGAGCTTGGTTTTTGACGAAGATCAATAGTTCATCAGCCTTATGTGCCAATTGCCGTGATTTGATTATGTAGAATTTGACTTCTTTATGGGAGACTTGAT
TTCAGTCTGCCAAATCATCTGTACCAAGCTTCGATACAGACATTCAAGGTTTGAATATAATTTCATGCGCTTCATCCTATCTTTGGTAGCAAATATTTTAAATCAATGCA
TATGGGCTAGCATTTCAGAACACAATGATATTGTTTGTATGATTTGCATTCGAATCGATATTTAGTCAAAATTCCTGATCTTGAAATTGTGTTCTTGGACTGTCTCCTTG
ACCATGATCCTGAAAGCATCTTAACAAATACAGGAC
Protein sequenceShow/hide protein sequence
MVAASAFPASLSLSVTSHNRTSSLPQFSRRNSLRSIVSSLPRSYGDSSTIGLSSKTNGTPINLEDRDFLHTSTSYGPIVANKKGNPPIMPGVMTPAGPLDLSSVLFRNRI
IFIGQPINSIVAQRVISQLVTLATIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQ
VNEAVQSRHKVDMMYAAFTGQPVEKVQQFTERDRFLSVSEALEFGLIDGVLETEY