CuGenDBv2

Gene ID	Sed0001220
Organism	Sechium edule (Chayote v1)
Description	pathogenesis-related protein PR-4-like
Genome location	LG08:31212018..31212922
RNA-Seq Expression	Sed0001220
Synteny	Sed0001220
Gene Ontology terms	GO:0042742 - defense response to bacterium (biological process) GO:0050832 - defense response to fungus (biological process) GO:0090501 - RNA phosphodiester bond hydrolysis (biological process) GO:0004540 - ribonuclease activity (molecular function)
InterPro domains	IPR001153 - Barwin domain IPR018226 - Barwin, conserved site IPR036908 - RlpA-like domain superfamily IPR044301 - Pathogenesis-related protein-4

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6599312.1 hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-67

88.03

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+ S L+IL LALGVLSLANAQSA NVRAT+HLYNPQDINWDYLRASVFCATWDAN+P+EWRR++GWTAFCGPVGPRGQASCGRCLRVTNTET +SEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]

3.3e-68

88.73

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        M +GS ++ILVLALGVLSLANAQSATNVRAT+HLYNPQDINWDYLRASVFCATWDA++PLEWRR++GWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN RGHLIVNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]

3.6e-70

90.85

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS ++ILVLALGVLSLANAQSATNVRAT+HLYNPQDINWDYLRASVFCATWDAN+PLEWRRR+GWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHL VNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]

5.7e-68

88.73

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+ S L+IL LALGVLSLANAQSA NVRAT+HLYNPQDINWDYLRASVFCATWDAN+P+EWRR++GWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]

6.7e-69

88.73

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS L+IL LALG+LSLANAQSA NVRAT+HLYNPQDINWDYLRASVFCATWDAN+P+EWRR++GWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIC8 Barwin domain-containing protein

1.6e-68

88.73

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        M +GS ++ILVLALGVLSLANAQSATNVRAT+HLYNPQDINWDYLRASVFCATWDA++PLEWRR++GWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN RGHLIVNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

A0A1S3C3H6 pathogenesis-related protein PR-4-like

1.7e-70

90.85

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS ++ILVLALGVLSLANAQSATNVRAT+HLYNPQDINWDYLRASVFCATWDAN+PLEWRRR+GWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHL VNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like

1.7e-70

90.85

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS ++ILVLALGVLSLANAQSATNVRAT+HLYNPQDINWDYLRASVFCATWDAN+PLEWRRR+GWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHL VNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

A0A6J1G2U1 pathogenesis-related protein PR-4-like

2.8e-68

88.73

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+ S L+IL LALGVLSLANAQSA NVRAT+HLYNPQDINWDYLRASVFCATWDAN+P+EWRR++GWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

A0A6J1K9X1 pathogenesis-related protein PR-4-like

3.3e-69

88.73

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Query:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS L+IL LALG+LSLANAQSA NVRAT+HLYNPQDINWDYLRASVFCATWDAN+P+EWRR++GWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MERGS-LIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FV+C
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

SwissProt top hits

e value

%identity

Alignment

P09761 Wound-induced protein WIN1

3.5e-52

72.27

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Query:  SATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRAT+H+YNPQ++ WD    S +C+TWDAN+PL WR+++GWTAFCGPVGPRG+ SCG+CLRVTNT T A   VRIVDQC+NGGLDLDVNVFR+IDT
Subjt:  SATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNFRGHLIVNYEFVSC
        +GNGN +GHLIVNY+FV C
Subjt:  NGNGNFRGHLIVNYEFVSC

P09762 Wound-induced protein WIN2

2.1e-49

68.91

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Query:  SATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRAT+H+YNPQ++ WD    S +C+TWDAN+P  WR ++GWTAFCGPVGPRG+ SCG+CLRVTNT T A   VRIVDQC+NGGLDLD+NVF++IDT
Subjt:  SATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNFRGHLIVNYEFVSC
        +G GN +GHLIVNY+FV+C
Subjt:  NGNGNFRGHLIVNYEFVSC

P29062 Pathogenesis-related protein PR-4A

4.1e-53

68.89

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Query:  IILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCA
        + L++   V+++A AQSATNVR+T+HLYNPQ+INWD   AS FCATWDA++PL WR+++GWTAFCGP GPRGQ SCGRCLRVTNT T     VRIVDQC+
Subjt:  IILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCA

Query:  NGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
        NGGLDLDVNVF ++DTNG G  +GHL VNYEFV+C
Subjt:  NGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

P29063 Pathogenesis-related protein PR-4B

1.8e-53

68.28

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Query:  MERGSLIILVLALGVLS----LANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRAS
        MER +   L +AL ++S    +A AQSATNVR+T+HLYNPQ+INWD   AS FCATWDA++PL WR+++GWTAFCGP GPRGQ SCGRCLRVTNT T   
Subjt:  MERGSLIILVLALGVLS----LANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRAS

Query:  EIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC
          VRIVDQC+NGGLDLDVNVF ++DTNG G  +GHLIVNYEFV+C
Subjt:  EIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

P32045 Pathogenesis-related protein P2

3.4e-55

76.38

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Query:  VLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDV
        ++++A AQSATNVRAT+HLYNPQ+INWD   ASV+CATWDA++PLEWRRR+GWTAFCGP GP GQASCGRCLRVTNT T   E VRIVDQC NGGLDLDV
Subjt:  VLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDV

Query:  NVFRRIDTNGNGNFRGHLIVNYEFVSC
        NVF R+DTNG G  RG+L VNYEFV+C
Subjt:  NVFRRIDTNGNGNFRGHLIVNYEFVSC

Arabidopsis top hits

e value

%identity

Alignment

AT3G04720.1 pathogenesis-related 4

7.7e-47

Show/hide

Query:  QSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRID
        +SA+NVRAT+H YNP   NWD    S +C+TWDA++P  WR ++GWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +ID
Subjt:  QSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRID

Query:  TNGNGNFRGHLIVNYEFVSC
        T+G G  +GHLIV+Y+FV C
Subjt:  TNGNGNFRGHLIVNYEFVSC

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGAGAGGAAGTTTGATAATTTTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTTAGGGCTACTTTTCATTTGTACAACCCACA
AGACATCAACTGGGATTACCTTAGGGCTAGTGTTTTTTGTGCAACATGGGATGCCAACCAGCCCTTAGAGTGGCGCCGCCGCTTCGGATGGACAGCCTTCTGCGGACCCG
TTGGCCCCCGTGGCCAAGCTTCCTGTGGTCGTTGTTTGAGAGTGACTAACACTGAAACAAGAGCATCAGAAATAGTGAGAATTGTTGATCAATGTGCCAATGGAGGTTTG
GATTTGGATGTGAATGTGTTTAGAAGAATTGATACCAATGGAAATGGAAACTTTCGAGGCCATCTTATTGTAAACTATGAGTTTGTTAGCTGTTGA

mRNA sequence

Show/hide mRNA sequence

AGTGAGAGATTCAATAGAGACAACACTGAGAGATAGAATGGAGAGAGGAAGTTTGATAATTTTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCA
CAAATGTTAGGGCTACTTTTCATTTGTACAACCCACAAGACATCAACTGGGATTACCTTAGGGCTAGTGTTTTTTGTGCAACATGGGATGCCAACCAGCCCTTAGAGTGG
CGCCGCCGCTTCGGATGGACAGCCTTCTGCGGACCCGTTGGCCCCCGTGGCCAAGCTTCCTGTGGTCGTTGTTTGAGAGTGACTAACACTGAAACAAGAGCATCAGAAAT
AGTGAGAATTGTTGATCAATGTGCCAATGGAGGTTTGGATTTGGATGTGAATGTGTTTAGAAGAATTGATACCAATGGAAATGGAAACTTTCGAGGCCATCTTATTGTAA
ACTATGAGTTTGTTAGCTGTTGAGATTCTTCTTTTAATTCATTCTTCCTATAGAAGAAGAATGAAAAATGAAAGAAAGATCCTTGCTCTAATGAATAAACTATGAAATAA
ATGGTTTCTTAATTTTATGTGCTTGCTTGAGAGGAGATTTAATGGTCTTAATAATGTAGGAAGTTTGTCCCCAAAAAGCGTTTAGAGACTTAGGATCTTAAAATAGACTC
ATTTTAAAGATTTTACGTTTGAACAGGC

Protein sequence

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MERGSLIILVLALGVLSLANAQSATNVRATFHLYNPQDINWDYLRASVFCATWDANQPLEWRRRFGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGL
DLDVNVFRRIDTNGNGNFRGHLIVNYEFVSC

Sed0001220 (gene) of Chayote v1 genome