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Sed0001231 (gene) of Chayote v1 genome

Gene IDSed0001231
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG04:28370790..28373169
RNA-Seq ExpressionSed0001231
SyntenySed0001231
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596489.1 hypothetical protein SDJN03_09669, partial [Cucurbita argyrosperma subsp. sororia]5.5e-3188.24Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAV---DAKQD
        MVCLACLLPLFLIPVVNALPVL+++IMGKIY IFGWEY KPQRVPPACPYRPAAKQNSNEEL+PLAGQQHP PPKAV   DAKQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAV---DAKQD

XP_008442719.1 PREDICTED: uncharacterized protein LOC103486509 [Cucumis melo]1.1e-3190.24Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD
        MVCLACLLPLFLIPVVNALPVLFY+IMGKIYG+FGWEYRKPQ VPPACPYRPAAKQNSN ELEPLAGQQHP PPK VDA  D
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD

XP_022983172.1 uncharacterized protein LOC111481805 [Cucurbita maxima]3.2e-3191.46Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD
        MVCLACLLPLFLIPVVNALPVLF +IMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSN ELEPLAGQQ P PPK VD KQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD

XP_023538875.1 uncharacterized protein LOC111799671 [Cucurbita pepo subsp. pepo]1.5e-3190.59Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPK---AVDAKQD
        MVCLACLLPLFLIPVVNALPVLF++IMGKIY IFGWEYRKPQ VPPACPYRPAAKQNSNEELEPLAGQQHP PPK   AVDAKQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPK---AVDAKQD

XP_038903023.1 uncharacterized protein LOC120089725 [Benincasa hispida]1.0e-3291.76Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDA---KQD
        MVCLACLLPLFLIPVVNALPVLFY+IMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSN +LEPLAGQQHP PPKAVDA   KQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDA---KQD

TrEMBL top hitse value%identityAlignment
A0A0A0LB44 Uncharacterized protein5.4e-3290.24Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD
        MVCLACLLPLFLIPVVNALPVLFY+IMGKIYG+FGWEYRKPQ VPPACPYRPAAKQNSN ELEPLAGQQHP PPK VDA  D
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD

A0A1S3B744 uncharacterized protein LOC1034865095.4e-3290.24Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD
        MVCLACLLPLFLIPVVNALPVLFY+IMGKIYG+FGWEYRKPQ VPPACPYRPAAKQNSN ELEPLAGQQHP PPK VDA  D
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD

A0A6J1CU80 uncharacterized protein LOC1110143852.3e-3084.52Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPP--KAVDAKQD
        MVCLACLLPLFLIPVVNALPVLFY+IMGKIYG+FGWEYRKP+RVPPACPYRPAAKQN N ELEP AGQQHP P    AVD K+D
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPP--KAVDAKQD

A0A6J1F5U6 uncharacterized protein LOC111442415 isoform X13.9e-3089.02Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD
        MVCLACLLPLFLIPVVNALPVLF +IMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSN ELEP AGQQ P PPK VDA  D
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD

A0A6J1IYJ1 uncharacterized protein LOC1114818051.6e-3191.46Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD
        MVCLACLLPLFLIPVVNALPVLF +IMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSN ELEPLAGQQ P PPK VD KQD
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G03460.1 unknown protein2.2e-1455.17Show/hide
Query:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNS
        MVC+ CL+PLFL+P++N +P +    M K+Y   GWEYRKP RVPPACP++P AK ++
Subjt:  MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGCTTGGCGTGTTTATTGCCTCTGTTTCTCATTCCTGTCGTCAACGCTCTGCCTGTTCTGTTCTACATAATTATGGGCAAAATTTATGGAATTTTTGGCTGGGA
ATATAGAAAACCACAGAGGGTGCCGCCGGCTTGTCCTTATCGCCCTGCTGCTAAGCAAAATAGCAATGAAGAGTTAGAACCTCTAGCTGGTCAGCAACATCCACAACCTC
CAAAAGCCGTGGATGCAAAGCAAGATTGA
mRNA sequenceShow/hide mRNA sequence
GACGGTTTTACCCTTTATTTCTTTCACTCATATTCATCAAAGGGTCCGCCAGTTCGTCAAAGTCGCGATCGTCTTTTCCAATCTCTCTGCAAATCGGATTCGAAAATGGT
TTGCTTGGCGTGTTTATTGCCTCTGTTTCTCATTCCTGTCGTCAACGCTCTGCCTGTTCTGTTCTACATAATTATGGGCAAAATTTATGGAATTTTTGGCTGGGAATATA
GAAAACCACAGAGGGTGCCGCCGGCTTGTCCTTATCGCCCTGCTGCTAAGCAAAATAGCAATGAAGAGTTAGAACCTCTAGCTGGTCAGCAACATCCACAACCTCCAAAA
GCCGTGGATGCAAAGCAAGATTGAATCTGGAAATATCTGTTGTACATAGCTGTCAGCCAGAACGAAAGATCTTTGTGGCCCTGAAAGCAGTGGACTCTGTCGATTTTAGG
AAGCTATGATTTCCAATCGGTCAGATAAAATATATTTTATATTCTCGTTATTAATAGCATCAATACAGTTTATCTTTTCAGTGCATGCTTTCTGAATAACATCATTATAG
ACATTGTGTTTATGCTTTCTGAATAATTTAGCTGCATGGCTTGGATA
Protein sequenceShow/hide protein sequence
MVCLACLLPLFLIPVVNALPVLFYIIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNEELEPLAGQQHPQPPKAVDAKQD