; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001234 (gene) of Chayote v1 genome

Gene IDSed0001234
OrganismSechium edule (Chayote v1)
Description60S ribosomal export protein NMD3
Genome locationLG14:20522632..20524495
RNA-Seq ExpressionSed0001234
SyntenySed0001234
Gene Ontology termsGO:0000055 - ribosomal large subunit export from nucleus (biological process)
GO:0015031 - protein transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR007064 - Nmd3, N-terminal
IPR039768 - Ribosomal export protein Nmd3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586102.1 60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. sororia]6.1e-15979.1Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKH AA NA+RIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIR   DK+LVSHD+KSN HNY+HTFSVE+SPICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGN+GP+VICT+VTN + LLDPLTLRH FLDA+QYWRTSFK LLTSRQLVEY V+DI+N STEVNV GSKYILADAQ+AR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DTIF+IRTHLGHIL PGD A GYDLY ANSN    + YKGLQ+PEAILIKKSYEEKR+RK GKPRSWKLKSLE +VDDKD  RAE+DK +SEYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYRN EYQ SE TDGE  P VP+EELLA LD++  +GD+ MHE
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

XP_004143504.1 60S ribosomal export protein NMD3 [Cucumis sativus]7.5e-15779.1Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKHGAA +A+RIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIR  HDK+LVSHD KSN HN++HTFSVEISPICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGNLGP+VICT+VTN I LLDP TLRH FLDADQYWRTSF+SLLTSRQLVEY V+DI+N STEVNV GSKY+LA AQVAR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DT+FSI+THLGHIL PGD A GYDLYGANSN    + YKGL++PEAILIKKSYEEKR+RKHGKPRSWKLKSL  DVDDK  ++ + +K NSEYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYRN EYQ SE TDGE  P VP+EELLA LD++E  GDD M+E
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

XP_022149109.1 60S ribosomal export protein NMD3 [Momordica charantia]3.4e-15778.81Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKHGAA +A+RIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIR  HDK+LVSHD KSN HN++HTFSVEI PICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGNLGP+VICT+VTN I LLDP TLRH FLDADQYWRTSF+SLLTSRQLVEY ++DI+N S EVNVGGSKY+LADAQVAR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DTIFSIRTHLGHIL PGD A GYDLY ANSN    D YKGL +PEAIL+KKSYEEKR+RK GKPR+WKLKSL+ DVDDK   R ++DK NSEYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYRN EYQ SE TDGE  P VP+EELLA LD++E++ DD M+E
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

XP_022938070.1 60S ribosomal export protein NMD3-like [Cucurbita moschata]1.6e-15979.38Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKH AA NA+RIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIR   DK+LVSHD+KSN HNY+HTFSVE+SPICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGN+GP+VICT+VTN + LLDPLTLRH FLDA+QYWRTSFK LLTSRQLVEY V+DI+N STEVNV GSKYILADAQ+AR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DTIF+IRTHLGHIL PGD A GYDLY ANSN    + YKGLQ+PEAILIKKSYEEKR+RK GKPRSWKLKSLE DVDDKD  RAE+DK + EYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYRN EYQ SE TDGE  P VP+EELLA LD++E +GD+ MHE
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

XP_022965515.1 60S ribosomal export protein NMD3-like [Cucurbita maxima]6.1e-15979.1Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKH AA NA+RIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIR   DK+LVSHD+KSN HNY+HTFSVE+SPICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGN+GP+VICT+VTN ++LLDPLTLRH FLDA+QYWRTSFK LLTSRQLVEY V+DI+N STEVNV GSKYILADAQ+AR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DTIF+IRTHLGHIL PGD A GYDLY ANSN    + YKGLQ+PEAILIKKSYEEKR+RK GKPRSWKLKSL  DVDDKD  RAE+DK +SEYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYR+ EYQ SE TDGE  P VP+EELLA LD++E  GD+ MHE
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

TrEMBL top hitse value%identityAlignment
A0A0A0KGY6 60S ribosomal export protein NMD33.6e-15779.1Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKHGAA +A+RIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIR  HDK+LVSHD KSN HN++HTFSVEISPICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGNLGP+VICT+VTN I LLDP TLRH FLDADQYWRTSF+SLLTSRQLVEY V+DI+N STEVNV GSKY+LA AQVAR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DT+FSI+THLGHIL PGD A GYDLYGANSN    + YKGL++PEAILIKKSYEEKR+RKHGKPRSWKLKSL  DVDDK  ++ + +K NSEYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYRN EYQ SE TDGE  P VP+EELLA LD++E  GDD M+E
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

A0A5D3CM67 60S ribosomal export protein NMD34.0e-15678.81Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKHGAA +A+RIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIR  HDK+LVSHD KSN HN++HTFSVEISPICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGNLGP+VICT+VTN I LLDP TLRH FLDADQYWRTSF+SLLTSRQLVEY V+DI+N STEVNV GSKY+LA AQVAR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DT+FSI+THLGHIL PGD A GYDLYGANSN    + YKGL++PEAILIKKSYEEKR+RK GKPRSWKLKSL  DVDDK  S+ + +K NSEYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYRN EYQ SE TDGE  P VP++ELLA LD++E  GDD M+E
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

A0A6J1D613 60S ribosomal export protein NMD31.6e-15778.81Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKHGAA +A+RIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIR  HDK+LVSHD KSN HN++HTFSVEI PICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGNLGP+VICT+VTN I LLDP TLRH FLDADQYWRTSF+SLLTSRQLVEY ++DI+N S EVNVGGSKY+LADAQVAR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DTIFSIRTHLGHIL PGD A GYDLY ANSN    D YKGL +PEAIL+KKSYEEKR+RK GKPR+WKLKSL+ DVDDK   R ++DK NSEYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYRN EYQ SE TDGE  P VP+EELLA LD++E++ DD M+E
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

A0A6J1FIM4 60S ribosomal export protein NMD37.8e-16079.38Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKH AA NA+RIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIR   DK+LVSHD+KSN HNY+HTFSVE+SPICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGN+GP+VICT+VTN + LLDPLTLRH FLDA+QYWRTSFK LLTSRQLVEY V+DI+N STEVNV GSKYILADAQ+AR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DTIF+IRTHLGHIL PGD A GYDLY ANSN    + YKGLQ+PEAILIKKSYEEKR+RK GKPRSWKLKSLE DVDDKD  RAE+DK + EYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYRN EYQ SE TDGE  P VP+EELLA LD++E +GD+ MHE
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

A0A6J1HNX8 60S ribosomal export protein NMD33.0e-15979.1Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA+VQL+QHVPHRRTF FLEQLILKH AA NA+RIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIR   DK+LVSHD+KSN HNY+HTFSVE+SPICR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDLICLPP  AV LGN+GP+VICT+VTN ++LLDPLTLRH FLDA+QYWRTSFK LLTSRQLVEY V+DI+N STEVNV GSKYILADAQ+AR+SDFGR+
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL
        DTIF+IRTHLGHIL PGD A GYDLY ANSN    + YKGLQ+PEAILIKKSYEEKR+RK GKPRSWKLKSL  DVDDKD  RAE+DK +SEYEQFLRDL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDL

Query:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE
        EENP++RFNISLYR+ EYQ SE TDGE  P VP+EELLA LD++E  GD+ MHE
Subjt:  EENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEENGDDDMHE

SwissProt top hitse value%identityAlignment
G0S488 60S ribosomal export protein NMD32.8e-6639.12Show/hide
Query:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE
        W A VQ++Q V H+RTFL LEQLILKH A  + + IK+   G+DFFF+ R+    FV F+  V PI     + L+S D  +    Y+ T+S EI PICR+
Subjt:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE

Query:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRSD
        DL+ LP   A ++GN+ P+ +C  +   + LLDP TL  + L +D YWR  F+ L  +  +VE+ V+DI+ T     +   K++LA+  VAR SD G +D
Subjt:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRSD

Query:  TIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYK-----GLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQF
         ++  RTHLGH+L PGD+  GY L G N N+  +D  +     G  IP+ +L+KK Y  +RR +    R+WKLK L  D  +      ++ + + EYE F
Subjt:  TIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYK-----GLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQF

Query:  LRDLEENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEE
        LRD+EE+ E+R  ++LY+N       + D + + +   E+
Subjt:  LRDLEENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEE

Q08DS5 60S ribosomal export protein NMD31.3e-6639.89Show/hide
Query:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE
        W A VQ++Q   H++TF +LEQLILK+G   N +RIK++  G+DF++S++ H  K VEF+    P R    +RL+S D  SNT+NY+ TFSVEI PIC++
Subjt:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE

Query:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVI------DIKNTSTEVNVGGSKYILADAQVARIS
        +++CL P  A  LGN+  I +C  VT+VI L+DP TL+ + +D + +W   F SL   +QL E+ V+      DIK  S    +   K+ L +  V + S
Subjt:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVI------DIKNTSTEVNVGGSKYILADAQVARIS

Query:  DFGRSDTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQ
        +   +D  +  RTHLGH+L PGD   G+DL   N N    +  K  ++P+ +LIKKSY+  RR++    R+WKLK L  D ++ D      D+R  +Y+ 
Subjt:  DFGRSDTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQ

Query:  FLRDLEENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEE
        FL DLEE+  +R N+++YR+        TD EG P + + E+L  L I+++
Subjt:  FLRDLEENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEE

Q55BF2 60S ribosomal export protein NMD31.2e-6738.59Show/hide
Query:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE
        W + VQL+Q V H+RTFL++EQLILKH A    + IK+   G+DFFFSNR+H +KFVEF+  + P++    ++L+S D ++N  NY++TFSVEI P+ ++
Subjt:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE

Query:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRSD
        D++CLPP  A +LGN+GP+V+ T+V+N+I  +DP TL    + A  +W + F++L + +QLVE+ V+D+  T         +Y L+D Q+ R +DFG +D
Subjt:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRSD

Query:  TIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDL---YKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLR
         I+ IR+HLG+IL PGD A GYD+  A+SN    DL    K  Q+P+ +L+KK+Y  K   +    R W  K +  +   ++  + E D+   + E+FLR
Subjt:  TIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDL---YKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLR

Query:  DLEENPEMRFNISLYRNGE-----YQTSERTDGEGVPLVPVEELLAV----------LDINEENGDDD
        ++E +PE+R  I++Y+  +      Q  ++    G+    ++E LA+          L IN+E  +D+
Subjt:  DLEENPEMRFNISLYRNGE-----YQTSERTDGEGVPLVPVEELLAV----------LDINEENGDDD

Q6GNS3 60S ribosomal export protein NMD32.6e-6738.86Show/hide
Query:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE
        W A VQ++Q V H++TF +LEQ ILKH    N +R+K++  G+DF+++++ HG K VEF+    P R    +RL+SHD  +N +NY+ TFSVEI P+C++
Subjt:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE

Query:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVID---IKNTSTEVNVG--GSKYILADAQVARISD
        +L+CL P  A  LGN+  I IC  VT+ I L+DP TL+ + +D + YWR  F SL   +Q+ E+ V+D   I++       G   +K++LA+  V + S+
Subjt:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVID---IKNTSTEVNVG--GSKYILADAQVARISD

Query:  FGRSDTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQF
           +   +  RTHLGH+L PGD   G+DL   N N    +      IP+ +LIKKSY+  RR++    R+WKLK ++ D +  D      D+R  +Y+ F
Subjt:  FGRSDTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQF

Query:  LRDLEENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEE
        L DLEE+  +R N+++++N        TD EG P + + E+L  L I+++
Subjt:  LRDLEENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDINEE

Q6P2Z6 60S ribosomal export protein NMD32.6e-6739.08Show/hide
Query:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE
        W A VQ++Q V H++TF +LEQ ILKH    N +R+K++  G+DF+++++ H  K VEF+    P R    +RL+SHD  +N +NY+ TFSVEI P+C++
Subjt:  WVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICRE

Query:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDI-----KNTSTEVNVGGSKYILADAQVARISD
        +L+CL P  A  LGN+  I IC  VT+ I L+DP TL+ + +D + YWR+ F SL   +QL E+ V+D      +  +    +  +K+ILA+  V + S+
Subjt:  DLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDI-----KNTSTEVNVGGSKYILADAQVARISD

Query:  FGRSDTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQF
           +   +  RTHLGH+L PGD   G+DL   N N    +      IP+ +LIKKSY+  +R++    R+WKLK +E D +  D      D+R  +Y+ F
Subjt:  FGRSDTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQF

Query:  LRDLEENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDIN
        L DLEE+  +R N+++Y+N        TD EG P + + E+L  L I+
Subjt:  LRDLEENPEMRFNISLYRNGEYQTSERTDGEGVPLVPVEELLAVLDIN

Arabidopsis top hitse value%identityAlignment
AT2G03820.1 nonsense-mediated mRNA decay NMD3 family protein6.2e-11759.66Show/hide
Query:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR
        +WVA++QL+QHV HRRTF +LEQLIL+H AA  A+RI+Q+DQGIDFFF N+SH   FVEF+ KV PI    D++LVSHD KS+ +NY++T+SV+I P+CR
Subjt:  EWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICR

Query:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS
        EDL+CLP   A  LGNLGP+V+CT+V++ ITLLDP TLR +FLDA QYWR+ F+S LTSRQLV+YFV D++    E  VGG KY L+  Q+AR SD G+ 
Subjt:  EDLICLPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRS

Query:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYK---GLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFL
          +F ++THLGHIL+PGD A GYD+YGAN N    + Y+      +PEAILIKK YEE+R RK  K R+WKLKSL  ++DD    R + +K + EYE+FL
Subjt:  DTIFSIRTHLGHILEPGDNAFGYDLYGANSNAFGYDLYK---GLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFL

Query:  RDLEENPEMRFNISLYRNGEYQTSE---RTDGEGVPLVPVEELLAVLDINEENGDDD
        RDLEENPE+RFNISLYR+ +YQ SE    TDGEG P VP+EELLA LD++ E  DDD
Subjt:  RDLEENPEMRFNISLYRNGEYQTSE---RTDGEGVPLVPVEELLAVLDINEENGDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGGGACGCGGAGTGGGTGGCTGCTGTTCAACTCAAGCAGCACGTCCCACATCGGCGCACCTTTTTGTTCTTGGAGCAACTGATACTAAAGCACGGTGCTGCTGA
CAATGCTGTAAGGATTAAACAGATGGATCAAGGTATTGACTTTTTCTTTTCCAATAGAAGTCATGGTGTCAAGTTTGTGGAATTTGTTGGGAAGGTTGCTCCCATCCGGG
GTCACCACGATAAACGACTTGTTTCACATGATGCTAAGAGTAACACTCACAATTATGAGCACACATTCTCTGTCGAAATCTCCCCAATATGCCGTGAGGATTTGATATGC
TTGCCTCCGATAGATGCTGTTCGTTTGGGCAATCTTGGTCCTATCGTAATTTGCACGGAAGTTACCAATGTCATTACTTTGCTTGACCCATTAACGTTAAGGCACTCCTT
CTTGGATGCTGATCAGTATTGGAGGACATCCTTTAAGTCTCTACTTACTAGCAGGCAACTTGTGGAATATTTTGTTATCGATATAAAGAATACCTCTACTGAAGTGAATG
TCGGTGGTTCGAAGTATATTTTGGCTGATGCTCAGGTAGCTCGTATATCTGATTTTGGAAGGAGTGACACGATATTTTCCATAAGAACCCATCTAGGTCATATTCTGGAG
CCTGGGGATAATGCCTTTGGTTATGATCTGTATGGAGCCAATAGTAATGCCTTTGGTTATGATCTGTATAAGGGGCTTCAGATTCCAGAAGCAATTCTAATCAAGAAGAG
TTACGAAGAAAAGCGTCGGAGAAAGCATGGAAAGCCTAGATCATGGAAGCTTAAATCTCTTGAAACGGATGTGGATGATAAAGATAATAGTAGAGCTGAGCGGGATAAGA
GGAACTCGGAATATGAACAGTTTTTAAGAGATTTGGAGGAGAATCCAGAGATGAGGTTCAACATATCATTGTACCGAAATGGAGAATACCAAACTTCTGAAAGGACTGAT
GGAGAAGGCGTACCTTTGGTACCAGTTGAGGAGTTGCTTGCTGTTCTTGATATTAATGAAGAGAATGGAGACGATGACATGCACGAGTAA
mRNA sequenceShow/hide mRNA sequence
CTCGCCCAAGATTTGACCTAAACCCTAAACGAAAAATATTCGCCATAGCCATCTCAGCCAACAGTCTCCTCTCTCGATCTTCATCTCCAAACCAAACTCTTTTGATTTTC
GCTTTAGGATTCAATTTATTTCTGCAAACGGCTATTCCAATTCTATCATCGACTTGATCCGCGTCTGATTCAAGGAATATAAACTATGTCGAGGGACGCGGAGTGGGTGG
CTGCTGTTCAACTCAAGCAGCACGTCCCACATCGGCGCACCTTTTTGTTCTTGGAGCAACTGATACTAAAGCACGGTGCTGCTGACAATGCTGTAAGGATTAAACAGATG
GATCAAGGTATTGACTTTTTCTTTTCCAATAGAAGTCATGGTGTCAAGTTTGTGGAATTTGTTGGGAAGGTTGCTCCCATCCGGGGTCACCACGATAAACGACTTGTTTC
ACATGATGCTAAGAGTAACACTCACAATTATGAGCACACATTCTCTGTCGAAATCTCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCGATAGATGCTGTTCGTT
TGGGCAATCTTGGTCCTATCGTAATTTGCACGGAAGTTACCAATGTCATTACTTTGCTTGACCCATTAACGTTAAGGCACTCCTTCTTGGATGCTGATCAGTATTGGAGG
ACATCCTTTAAGTCTCTACTTACTAGCAGGCAACTTGTGGAATATTTTGTTATCGATATAAAGAATACCTCTACTGAAGTGAATGTCGGTGGTTCGAAGTATATTTTGGC
TGATGCTCAGGTAGCTCGTATATCTGATTTTGGAAGGAGTGACACGATATTTTCCATAAGAACCCATCTAGGTCATATTCTGGAGCCTGGGGATAATGCCTTTGGTTATG
ATCTGTATGGAGCCAATAGTAATGCCTTTGGTTATGATCTGTATAAGGGGCTTCAGATTCCAGAAGCAATTCTAATCAAGAAGAGTTACGAAGAAAAGCGTCGGAGAAAG
CATGGAAAGCCTAGATCATGGAAGCTTAAATCTCTTGAAACGGATGTGGATGATAAAGATAATAGTAGAGCTGAGCGGGATAAGAGGAACTCGGAATATGAACAGTTTTT
AAGAGATTTGGAGGAGAATCCAGAGATGAGGTTCAACATATCATTGTACCGAAATGGAGAATACCAAACTTCTGAAAGGACTGATGGAGAAGGCGTACCTTTGGTACCAG
TTGAGGAGTTGCTTGCTGTTCTTGATATTAATGAAGAGAATGGAGACGATGACATGCACGAGTAAGTATTTAGGGATTTGTTTTTAACTGGATGGAGAGATTTGTTCATT
TTTTAAAAAGTTGAAGTATAAATATTTATCATAATTTGTTGTGATATTGATTTGTAATTTAAGTTTGTTTAATTAATTTAGGTCTCTGTTTGATATCTCCTTTTCTTTTT
TGTAAGTAGAGACATTTTTAATTTTTTAAAAACGTTTTGGG
Protein sequenceShow/hide protein sequence
MSRDAEWVAAVQLKQHVPHRRTFLFLEQLILKHGAADNAVRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRGHHDKRLVSHDAKSNTHNYEHTFSVEISPICREDLIC
LPPIDAVRLGNLGPIVICTEVTNVITLLDPLTLRHSFLDADQYWRTSFKSLLTSRQLVEYFVIDIKNTSTEVNVGGSKYILADAQVARISDFGRSDTIFSIRTHLGHILE
PGDNAFGYDLYGANSNAFGYDLYKGLQIPEAILIKKSYEEKRRRKHGKPRSWKLKSLETDVDDKDNSRAERDKRNSEYEQFLRDLEENPEMRFNISLYRNGEYQTSERTD
GEGVPLVPVEELLAVLDINEENGDDDMHE