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Sed0001237 (gene) of Chayote v1 genome

Gene IDSed0001237
OrganismSechium edule (Chayote v1)
DescriptionPhytosulfokine-beta
Genome locationLG04:29139246..29140070
RNA-Seq ExpressionSed0001237
SyntenySed0001237
Gene Ontology termsGO:0008283 - cell population proliferation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580671.1 hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sororia]4.9e-2367.01Show/hide
Query:  MNQNSHGFFFF----ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK--EEKEEWENRRMMLEAHLDYVYTQN
        MNQ+SHGFFFF     L IFL+FSQS SA F  AKQ    GL ETH KL+H   Q DSW DFPHI+GG EK  EE+E WE R+MMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFF----ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK--EEKEEWENRRMMLEAHLDYVYTQN

XP_022935155.1 uncharacterized protein LOC111442110 [Cucurbita moschata]2.8e-2366.67Show/hide
Query:  MNQNSHGFFFF----ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK--EEKEEWENRRMMLEAHLDYVYTQNEK
        MNQ+SHGFFFF     L IFL+FSQS SA F  AKQ    GL ETH KL+H   Q DSW DFPHI+GG EK  EE+E WE R+MMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFF----ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK--EEKEEWENRRMMLEAHLDYVYTQNEK

XP_022983167.1 uncharacterized protein LOC111481800 [Cucurbita maxima]6.8e-2567.68Show/hide
Query:  MNQNSHGFFFF---ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK---EEKEEWENRRMMLEAHLDYVYTQNEK
        MNQ+SHGFFFF    L IFL+FSQSTSA F  AKQ    GL ETH KL+H + Q DSW DFPHI+GG EK   EE+E WE R+MMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFF---ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK---EEKEEWENRRMMLEAHLDYVYTQNEK

XP_023528216.1 putative phytosulfokines 6 [Cucurbita pepo subsp. pepo]5.7e-2465.66Show/hide
Query:  MNQNSHGFFFF----ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK--EEKEEWENRRMMLEAHLDYVYTQNEK
        MNQ+SHGFFFF     L IFL+FSQS SA F  AKQ    GL ETH KL+H + Q DSW DFPH++GG EK  EE+E WE R+MMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFF----ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK--EEKEEWENRRMMLEAHLDYVYTQNEK

XP_038906014.1 uncharacterized protein LOC120091917 [Benincasa hispida]1.7e-2360.36Show/hide
Query:  MNQNSHGFFFF----ILLIFLIF-SQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK------------EEKEEWENRRMMLEAH
        MNQNSHGFFFF     L IFL+F S S SA F ++KQ    G+EETH K+SH + Q DSW DFPHI+GG EK            EE+EEWE  +MMLEAH
Subjt:  MNQNSHGFFFF----ILLIFLIF-SQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK------------EEKEEWENRRMMLEAH

Query:  LDYVYTQNEKP
        LDYVYTQNEKP
Subjt:  LDYVYTQNEKP

TrEMBL top hitse value%identityAlignment
A0A1S4DUI1 Phytosulfokine-beta3.4e-1450.47Show/hide
Query:  NQNSHGFFFF---------ILLIFLIF-SQSTSACFTTAKQVKFAGLEETHNKLSH--EIAQDDSWLDFPHILGGTEKE--EKEEWENRRMMLEAHLDYV
        N+NSHGFFFF          L I L+F S S SA F  +K     G+EETH K+S+   +   DSW DFPH+    ++E  E+EE E R+MMLEAHLDYV
Subjt:  NQNSHGFFFF---------ILLIFLIF-SQSTSACFTTAKQVKFAGLEETHNKLSH--EIAQDDSWLDFPHILGGTEKE--EKEEWENRRMMLEAHLDYV

Query:  YTQNEKP
        YTQ+E P
Subjt:  YTQNEKP

A0A6J1F9T2 Phytosulfokine-beta1.4e-2366.67Show/hide
Query:  MNQNSHGFFFF----ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK--EEKEEWENRRMMLEAHLDYVYTQNEK
        MNQ+SHGFFFF     L IFL+FSQS SA F  AKQ    GL ETH KL+H   Q DSW DFPHI+GG EK  EE+E WE R+MMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFF----ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK--EEKEEWENRRMMLEAHLDYVYTQNEK

A0A6J1FSF0 Phytosulfokine-beta3.4e-2265.96Show/hide
Query:  MNQNSHGFFFFILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEKEEKEEWENRRMMLEAHLDYVYTQNEKP
        MNQ+SHG FF    IFL+ SQS +A F   KQ    G EETHNKLSH + Q DSW DFP I+   E+EE EEWE RRMMLEAHLDYVYTQNEKP
Subjt:  MNQNSHGFFFFILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEKEEKEEWENRRMMLEAHLDYVYTQNEKP

A0A6J1IYI6 Phytosulfokine-beta3.3e-2567.68Show/hide
Query:  MNQNSHGFFFF---ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK---EEKEEWENRRMMLEAHLDYVYTQNEK
        MNQ+SHGFFFF    L IFL+FSQSTSA F  AKQ    GL ETH KL+H + Q DSW DFPHI+GG EK   EE+E WE R+MMLEAHLDYVYTQN K
Subjt:  MNQNSHGFFFF---ILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEK---EEKEEWENRRMMLEAHLDYVYTQNEK

A0A6J1KTY7 Phytosulfokine-beta2.6e-2266.32Show/hide
Query:  MNQNSHGF-FFFILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEKEEKEEWENRRMMLEAHLDYVYTQNEKP
        MNQ+SHGF  FF   IFL+ SQS +A F   KQ    G EETHNKLSH + Q DSW DFP I+   E+EE EEWE RRMMLEAHLDYVYTQNEKP
Subjt:  MNQNSHGF-FFFILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEKEEKEEWENRRMMLEAHLDYVYTQNEKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAGAACTCCCATGGCTTCTTCTTCTTCATTCTCTTGATTTTCCTTATCTTTTCACAATCAACATCTGCCTGTTTCACAACAGCCAAACAAGTAAAATTTGCAGG
TCTTGAAGAAACCCACAACAAGCTTAGCCATGAAATAGCTCAAGATGATTCATGGCTAGATTTCCCCCATATATTGGGAGGAACAGAGAAGGAAGAAAAAGAAGAGTGGG
AGAATAGAAGGATGATGTTGGAAGCACACTTGGATTATGTGTACACACAAAATGAGAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
GTGACTTGAAAAGGGCAACAAACACAATCTCTCTATTCTATTCTCTCCTCTTTTTTTCTTTTCTTAATTTTCCTCTGTTTTTCTTCTAATCATTTCTCAACACTGAGAAA
ATGAACCAGAACTCCCATGGCTTCTTCTTCTTCATTCTCTTGATTTTCCTTATCTTTTCACAATCAACATCTGCCTGTTTCACAACAGCCAAACAAGTAAAATTTGCAGG
TCTTGAAGAAACCCACAACAAGCTTAGCCATGAAATAGCTCAAGATGATTCATGGCTAGATTTCCCCCATATATTGGGAGGAACAGAGAAGGAAGAAAAAGAAGAGTGGG
AGAATAGAAGGATGATGTTGGAAGCACACTTGGATTATGTGTACACACAAAATGAGAAGCCTTGAATTCAATAAAATTTTCAATACATGGTTTTGTTTATGTACACATCC
AAATAATAATAAAAGAAATGTTGCTGTTTTCATCCACTTAGTATAGGCTATATAGTAATGCTTACAAGAGGTTTTATATTACTTTCCTTTCCCTTTCCTTTTCTAGTTGC
TTCCTCAAGTTAAATATGCTAATAAATTTGTGATTTTATGTATATAAAAAGGCTTTAATTAGTGTACCAGCATGTTTGAGAGACCTTTTTCGAAATAAAATAGTTATTAT
TA
Protein sequenceShow/hide protein sequence
MNQNSHGFFFFILLIFLIFSQSTSACFTTAKQVKFAGLEETHNKLSHEIAQDDSWLDFPHILGGTEKEEKEEWENRRMMLEAHLDYVYTQNEKP