; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001241 (gene) of Chayote v1 genome

Gene IDSed0001241
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG13:5151278..5151963
RNA-Seq ExpressionSed0001241
SyntenySed0001241
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG53035.1 hypothetical protein EZV62_022204 [Acer yangbiense]2.9e-1131.01Show/hide
Query:  IGEQEAQGVFE---LEDNDISAYE----------RELEGVMACRIHSEKQVSPDVFKKLIPKIWN--AEQKLLTVDR-----RVSELEFGYADFWVRLHD
        + E E   ++E   L D D+  +E          +++E  +  ++ + K+V+ + FK+LI +IWN  +   L+ +++      +S L F  ADFW+++HD
Subjt:  IGEQEAQGVFE---LEDNDISAYE----------RELEGVMACRIHSEKQVSPDVFKKLIPKIWN--AEQKLLTVDR-----RVSELEFGYADFWVRLHD

Query:  VPPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSG
        +   C     AK L   +G  +   SE      G F+RVKV IDI +PL+  L+LK G
Subjt:  VPPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSG

TXG54199.1 hypothetical protein EZV62_019455 [Acer yangbiense]2.7e-1231.85Show/hide
Query:  QFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIW----NAEQKLLTVD-----RRVSELEFGYADFWVRLHDV
        +  ++  NL + E++   + E  +      E++++  +  ++ S K+V+ + FK LI +IW    N E  L+ ++       +S L+F  ADFW+++H++
Subjt:  QFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIW----NAEQKLLTVD-----RRVSELEFGYADFWVRLHDV

Query:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSG
        P  C     AK L   +G  +   SE      G FLRVKV IDI +PL+R L+LK G
Subjt:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSG

TXG61030.1 hypothetical protein EZV62_012393 [Acer yangbiense]7.7e-1229.56Show/hide
Query:  QFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWN----AEQKLLTVDR-----RVSELEFGYADFWVRLHDV
        + E++  +L + E++   +    ++ I   E +++  +  ++ S K+V+ + FK LI +IW+     E  L+++++      +++L F  A+FW+++HD+
Subjt:  QFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWN----AEQKLLTVDR-----RVSELEFGYADFWVRLHDV

Query:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSGAM
        P  C     AK L   +G  +   SE      G F+RVKVSIDI +PL+R L+ K G +
Subjt:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSGAM

TXG70623.1 hypothetical protein EZV62_005558 [Acer yangbiense]2.2e-1129.87Show/hide
Query:  MEVFQFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWNAEQKLLTV-----DRRVSELEFGYADFWVRLHDV
        M   +  ++   L + E+E   + +L++   +  E+ L   +A ++ S K V+ D F  ++PKIW+ ++ LL +      R + ++ F    FWV++H V
Subjt:  MEVFQFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWNAEQKLLTV-----DRRVSELEFGYADFWVRLHDV

Query:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKL
        P  C T    + LGNM+G     D  G     G ++RV+V IDI +P+R  L++
Subjt:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKL

TXG73180.1 hypothetical protein EZV62_001759 [Acer yangbiense]2.9e-1130.19Show/hide
Query:  NLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWNA---------------EQKLLTVD-----RRVSELEFGYADFWVR
        NL + +++   +  +E+ ++   E +++  +  R+ S K+V+ + FK LI ++WN                 + L+ ++     R VS+L F  A+FWV+
Subjt:  NLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWNA---------------EQKLLTVD-----RRVSELEFGYADFWVR

Query:  LHDVPPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLK
        +HD+P  C     AK L   +G  +   ++      G F+RVKV IDI RPL+R L+LK
Subjt:  LHDVPPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLK

TrEMBL top hitse value%identityAlignment
A0A5C7H981 Uncharacterized protein1.4e-1131.01Show/hide
Query:  IGEQEAQGVFE---LEDNDISAYE----------RELEGVMACRIHSEKQVSPDVFKKLIPKIWN--AEQKLLTVDR-----RVSELEFGYADFWVRLHD
        + E E   ++E   L D D+  +E          +++E  +  ++ + K+V+ + FK+LI +IWN  +   L+ +++      +S L F  ADFW+++HD
Subjt:  IGEQEAQGVFE---LEDNDISAYE----------RELEGVMACRIHSEKQVSPDVFKKLIPKIWN--AEQKLLTVDR-----RVSELEFGYADFWVRLHD

Query:  VPPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSG
        +   C     AK L   +G  +   SE      G F+RVKV IDI +PL+  L+LK G
Subjt:  VPPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSG

A0A5C7HBH6 CCHC-type domain-containing protein1.3e-1231.85Show/hide
Query:  QFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIW----NAEQKLLTVD-----RRVSELEFGYADFWVRLHDV
        +  ++  NL + E++   + E  +      E++++  +  ++ S K+V+ + FK LI +IW    N E  L+ ++       +S L+F  ADFW+++H++
Subjt:  QFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIW----NAEQKLLTVD-----RRVSELEFGYADFWVRLHDV

Query:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSG
        P  C     AK L   +G  +   SE      G FLRVKV IDI +PL+R L+LK G
Subjt:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSG

A0A5C7HVR6 Uncharacterized protein3.7e-1229.56Show/hide
Query:  QFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWN----AEQKLLTVDR-----RVSELEFGYADFWVRLHDV
        + E++  +L + E++   +    ++ I   E +++  +  ++ S K+V+ + FK LI +IW+     E  L+++++      +++L F  A+FW+++HD+
Subjt:  QFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWN----AEQKLLTVDR-----RVSELEFGYADFWVRLHDV

Query:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSGAM
        P  C     AK L   +G  +   SE      G F+RVKVSIDI +PL+R L+ K G +
Subjt:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSGAM

A0A5C7IMP3 CCHC-type domain-containing protein1.1e-1129.87Show/hide
Query:  MEVFQFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWNAEQKLLTV-----DRRVSELEFGYADFWVRLHDV
        M   +  ++   L + E+E   + +L++   +  E+ L   +A ++ S K V+ D F  ++PKIW+ ++ LL +      R + ++ F    FWV++H V
Subjt:  MEVFQFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWNAEQKLLTV-----DRRVSELEFGYADFWVRLHDV

Query:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKL
        P  C T    + LGNM+G     D  G     G ++RV+V IDI +P+R  L++
Subjt:  PPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKL

A0A5C7IV30 CCHC-type domain-containing protein1.4e-1130.19Show/hide
Query:  NLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWNA---------------EQKLLTVD-----RRVSELEFGYADFWVR
        NL + +++   +  +E+ ++   E +++  +  R+ S K+V+ + FK LI ++WN                 + L+ ++     R VS+L F  A+FWV+
Subjt:  NLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWNA---------------EQKLLTVD-----RRVSELEFGYADFWVR

Query:  LHDVPPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLK
        +HD+P  C     AK L   +G  +   ++      G F+RVKV IDI RPL+R L+LK
Subjt:  LHDVPPACHTENNAKGLGNMVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTTTCCAATTTGAGCAGATGATGGCAAATTTGGAGATTGGTGAACAAGAAGCACAAGGAGTGTTTGAACTTGAAGACAATGACATTTCCGCTTATGAGAGAGA
ACTGGAAGGAGTTATGGCTTGCAGAATCCACTCGGAAAAACAGGTCAGCCCTGATGTTTTCAAAAAGCTTATCCCAAAAATTTGGAATGCCGAACAAAAGCTTTTGACTG
TAGATAGGCGGGTTTCTGAGCTTGAATTCGGCTATGCTGATTTTTGGGTTCGTCTTCATGATGTTCCGCCGGCATGTCATACCGAGAACAATGCGAAAGGGTTGGGAAAT
ATGGTTGGGGTTTTCATCACTTGGGACAGTGAGGGAGATCATAGGAATAGAGGAAATTTTTTAAGGGTGAAAGTTTCAATAGATATTAGGCGTCCGTTGAGAAGAACGTT
AAAGCTTAAGAGCGGTGCTATGGCTAATGAAAAGTGGGTCGCCGAAAAACTCTTTGGGAAATGGGCAGTTGCGCTAGGACAGTCTGAAAAGCCAGAATATTTTCGCAGGA
TTTGGGGAGATCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTTTCCAATTTGAGCAGATGATGGCAAATTTGGAGATTGGTGAACAAGAAGCACAAGGAGTGTTTGAACTTGAAGACAATGACATTTCCGCTTATGAGAGAGA
ACTGGAAGGAGTTATGGCTTGCAGAATCCACTCGGAAAAACAGGTCAGCCCTGATGTTTTCAAAAAGCTTATCCCAAAAATTTGGAATGCCGAACAAAAGCTTTTGACTG
TAGATAGGCGGGTTTCTGAGCTTGAATTCGGCTATGCTGATTTTTGGGTTCGTCTTCATGATGTTCCGCCGGCATGTCATACCGAGAACAATGCGAAAGGGTTGGGAAAT
ATGGTTGGGGTTTTCATCACTTGGGACAGTGAGGGAGATCATAGGAATAGAGGAAATTTTTTAAGGGTGAAAGTTTCAATAGATATTAGGCGTCCGTTGAGAAGAACGTT
AAAGCTTAAGAGCGGTGCTATGGCTAATGAAAAGTGGGTCGCCGAAAAACTCTTTGGGAAATGGGCAGTTGCGCTAGGACAGTCTGAAAAGCCAGAATATTTTCGCAGGA
TTTGGGGAGATCTCTAG
Protein sequenceShow/hide protein sequence
MEVFQFEQMMANLEIGEQEAQGVFELEDNDISAYERELEGVMACRIHSEKQVSPDVFKKLIPKIWNAEQKLLTVDRRVSELEFGYADFWVRLHDVPPACHTENNAKGLGN
MVGVFITWDSEGDHRNRGNFLRVKVSIDIRRPLRRTLKLKSGAMANEKWVAEKLFGKWAVALGQSEKPEYFRRIWGDL