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Sed0001274 (gene) of Chayote v1 genome

Gene IDSed0001274
OrganismSechium edule (Chayote v1)
DescriptionB box-type domain-containing protein
Genome locationLG01:1161214..1161588
RNA-Seq ExpressionSed0001274
SyntenySed0001274
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042428.1 Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]4.3e-4367.15Show/hide
Query:  MCKGVEEGN------HSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART
        MC+GVEEGN      HS G G GGCRQ           A ++MCELCNS+ASLYCQAD+AYLCRKCDK VHGANFLA RHIRCILC+ CQNLT+KYL  T
Subjt:  MCKGVEEGN------HSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART

Query:  STELLLPAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL
        STE+LLP I+ CT+A+ C NNGNL+ CC+VMLK PFL
Subjt:  STELLLPAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL

KAG6570870.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3663.43Show/hide
Query:  MCKG-VEEGNHSGGGGSGGCRQF---------REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTEL
        MC+G VE+ +H      GGCR+F          E ++VMCELC+SRASLYCQAD+AYLCRKCDK VHGANFLA RHIRCILCN CQNLT KYL  TST++
Subjt:  MCKG-VEEGNHSGGGGSGGCRQF---------REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTEL

Query:  LLPAIVTCTQ-AHPCN-NGNLHNCCNVMLKWPFL
        LLP IVTC Q  + CN N NL  CC+V LK P L
Subjt:  LLPAIVTCTQ-AHPCN-NGNLHNCCNVMLKWPFL

KGN63276.1 hypothetical protein Csa_022167 [Cucumis sativus]3.6e-4267.18Show/hide
Query:  MCKGVEEGNHSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLL
        MC+GVEEGNH    G  GCRQ           A +VMCELCNS+ASLYCQAD+AYLCRKCDK VHGANFLA RHIRCILCN CQNLT+KYL  TSTE+LL
Subjt:  MCKGVEEGNHSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLL

Query:  PAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL
        P I+ C +A+ C NNGN + CC+VM K PFL
Subjt:  PAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL

TYK13446.1 Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]4.3e-4367.15Show/hide
Query:  MCKGVEEGN------HSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART
        MC+GVEEGN      HS G G GGCRQ           A ++MCELCNS+ASLYCQAD+AYLCRKCDK VHGANFLA RHIRCILC+ CQNLT+KYL  T
Subjt:  MCKGVEEGN------HSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART

Query:  STELLLPAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL
        STE+LLP I+ CT+A+ C NNGNL+ CC+VMLK PFL
Subjt:  STELLLPAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL

XP_022986418.1 B-box domain protein 30-like [Cucurbita maxima]6.6e-3663.43Show/hide
Query:  MCKG-VEEGNHSGGGGSGGCRQF---------REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTEL
        MC+G VE+ +H      GGCR F          E ++VMCELCNSRASLYCQAD+AYLCRKCDK VHGANFLA RHIRCILC+ CQNLT KYL  TST++
Subjt:  MCKG-VEEGNHSGGGGSGGCRQF---------REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTEL

Query:  LLPAIVTCTQ-AHPCN-NGNLHNCCNVMLKWPFL
        LLP IVTC Q  + CN N NL+ CC+V LK P L
Subjt:  LLPAIVTCTQ-AHPCN-NGNLHNCCNVMLKWPFL

TrEMBL top hitse value%identityAlignment
A0A0A0LTB0 B box-type domain-containing protein1.7e-4267.18Show/hide
Query:  MCKGVEEGNHSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLL
        MC+GVEEGNH    G  GCRQ           A +VMCELCNS+ASLYCQAD+AYLCRKCDK VHGANFLA RHIRCILCN CQNLT+KYL  TSTE+LL
Subjt:  MCKGVEEGNHSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLL

Query:  PAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL
        P I+ C +A+ C NNGN + CC+VM K PFL
Subjt:  PAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL

A0A2C9UPR0 B box-type domain-containing protein1.5e-3055.64Show/hide
Query:  MCKGVEEGNHSGG----------GGSGGCRQFREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTEL
        MC+GVEE +HS G           GSG       +S+V CELC S+ASLYCQAD A+LCRKCDK VHGANFLA RHIRC LCN CQNLT++YL   STE+
Subjt:  MCKGVEEGNHSGG----------GGSGGCRQFREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTEL

Query:  LLPAIVTCTQAHP-CNNGNLHNCCNVMLKWPFL
        +LP IV+  +    CN  N    C+  LK PFL
Subjt:  LLPAIVTCTQAHP-CNNGNLHNCCNVMLKWPFL

A0A5A7TI11 Zinc finger protein CONSTANS-LIKE 142.1e-4367.15Show/hide
Query:  MCKGVEEGN------HSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART
        MC+GVEEGN      HS G G GGCRQ           A ++MCELCNS+ASLYCQAD+AYLCRKCDK VHGANFLA RHIRCILC+ CQNLT+KYL  T
Subjt:  MCKGVEEGN------HSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART

Query:  STELLLPAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL
        STE+LLP I+ CT+A+ C NNGNL+ CC+VMLK PFL
Subjt:  STELLLPAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL

A0A5D3CSP7 Zinc finger protein CONSTANS-LIKE 142.1e-4367.15Show/hide
Query:  MCKGVEEGN------HSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART
        MC+GVEEGN      HS G G GGCRQ           A ++MCELCNS+ASLYCQAD+AYLCRKCDK VHGANFLA RHIRCILC+ CQNLT+KYL  T
Subjt:  MCKGVEEGN------HSGGGGSGGCRQ--------FREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART

Query:  STELLLPAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL
        STE+LLP I+ CT+A+ C NNGNL+ CC+VMLK PFL
Subjt:  STELLLPAIVTCTQAHPC-NNGNLHNCCNVMLKWPFL

A0A6J1JGF8 B-box domain protein 30-like3.2e-3663.43Show/hide
Query:  MCKG-VEEGNHSGGGGSGGCRQF---------REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTEL
        MC+G VE+ +H      GGCR F          E ++VMCELCNSRASLYCQAD+AYLCRKCDK VHGANFLA RHIRCILC+ CQNLT KYL  TST++
Subjt:  MCKG-VEEGNHSGGGGSGGCRQF---------REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTEL

Query:  LLPAIVTCTQ-AHPCN-NGNLHNCCNVMLKWPFL
        LLP IVTC Q  + CN N NL+ CC+V LK P L
Subjt:  LLPAIVTCTQ-AHPCN-NGNLHNCCNVMLKWPFL

SwissProt top hitse value%identityAlignment
O82256 Zinc finger protein CONSTANS-LIKE 137.9e-0835.71Show/hide
Query:  MCELCNSRASL-YCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAIVTCTQAHPCNNGNLHN
        +C+ C+S  +L YC+AD A LC  CDK VH AN L  +H R +LC+ C          T   +L      C   H   + +LH+
Subjt:  MCELCNSRASL-YCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAIVTCTQAHPCNNGNLHN

Q1G3I2 B-box domain protein 304.2e-1742.86Show/hide
Query:  MCKGVEEGNHSGGGGSGGCRQF---REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAI
        MC+G E+        +GGC++       + V CELC   A++YC+AD A+LCRKCD+ VH ANFLA RH+R ++C  C+ LT + L   +  ++LP I
Subjt:  MCKGVEEGNHSGGGGSGGCRQF---REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAI

Q96502 Zinc finger protein CONSTANS-LIKE 21.0e-0740.91Show/hide
Query:  CELCNSRA-SLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPA
        C+ C S A ++YC+AD AYLC  CD  VH AN +A RH R  +C  C++    +L +     L  A
Subjt:  CELCNSRA-SLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPA

Q9LJB7 B-box zinc finger protein 321.5e-1138.82Show/hide
Query:  CELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAIVTCTQAHPCNNGNLHNCCN
        CELC + A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LT+ ++  +   L  P   TC     C+  +  +CC+
Subjt:  CELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAIVTCTQAHPCNNGNLHNCCN

Q9LRM4 B-box domain protein 315.8e-1949.02Show/hide
Query:  MCKGV--EEGNHSGGGGSGGCRQF--REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART-STELLLPAI
        MC+G+  EE   S G   GGCR    R +  V CELC+  AS++C+AD A+LCRKCD+ VHGANFLA RH+R +LC  CQ LT + L       ++LP++
Subjt:  MCKGV--EEGNHSGGGGSGGCRQF--REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART-STELLLPAI

Query:  VT
         T
Subjt:  VT

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 321.1e-1238.82Show/hide
Query:  CELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAIVTCTQAHPCNNGNLHNCCN
        CELC + A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LT+ ++  +   L  P   TC     C+  +  +CC+
Subjt:  CELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAIVTCTQAHPCNNGNLHNCCN

AT3G21890.1 B-box type zinc finger family protein4.1e-2049.02Show/hide
Query:  MCKGV--EEGNHSGGGGSGGCRQF--REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART-STELLLPAI
        MC+G+  EE   S G   GGCR    R +  V CELC+  AS++C+AD A+LCRKCD+ VHGANFLA RH+R +LC  CQ LT + L       ++LP++
Subjt:  MCKGV--EEGNHSGGGGSGGCRQF--REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLART-STELLLPAI

Query:  VT
         T
Subjt:  VT

AT4G15248.1 B-box type zinc finger family protein3.0e-1842.86Show/hide
Query:  MCKGVEEGNHSGGGGSGGCRQF---REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAI
        MC+G E+        +GGC++       + V CELC   A++YC+AD A+LCRKCD+ VH ANFLA RH+R ++C  C+ LT + L   +  ++LP I
Subjt:  MCKGVEEGNHSGGGGSGGCRQF---REASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAI

AT4G27310.1 B-box type zinc finger family protein3.8e-1358Show/hide
Query:  CELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLT
        C+LCN  A +YC++D+A LC  CD  VHGANFL  +H RC+LC+ CQ+LT
Subjt:  CELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLT

AT5G54470.1 B-box type zinc finger family protein7.1e-1256Show/hide
Query:  CELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLT
        CELC   A +YC++D+A LC  CD  VHGANFL  +H+RC+LC+ CQ+ T
Subjt:  CELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAAAGGTGTGGAAGAAGGAAACCACAGCGGCGGCGGTGGCAGCGGCGGTTGCAGGCAGTTTCGGGAGGCGTCGATGGTGATGTGCGAGCTCTGCAACTCGAGAGC
TTCATTGTACTGCCAAGCAGATGAAGCTTATCTTTGTAGAAAATGTGACAAATTGGTTCATGGTGCTAATTTCTTAGCCCACAGGCATATTAGGTGCATTCTCTGTAACT
TTTGTCAAAACTTAACCGAAAAATACCTCGCCCGAACTTCGACTGAGCTTCTTCTTCCGGCCATCGTCACCTGCACTCAAGCTCATCCCTGTAACAATGGAAACCTTCAC
AATTGTTGTAATGTAATGCTCAAATGGCCTTTTCTCCTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAAAGGTGTGGAAGAAGGAAACCACAGCGGCGGCGGTGGCAGCGGCGGTTGCAGGCAGTTTCGGGAGGCGTCGATGGTGATGTGCGAGCTCTGCAACTCGAGAGC
TTCATTGTACTGCCAAGCAGATGAAGCTTATCTTTGTAGAAAATGTGACAAATTGGTTCATGGTGCTAATTTCTTAGCCCACAGGCATATTAGGTGCATTCTCTGTAACT
TTTGTCAAAACTTAACCGAAAAATACCTCGCCCGAACTTCGACTGAGCTTCTTCTTCCGGCCATCGTCACCTGCACTCAAGCTCATCCCTGTAACAATGGAAACCTTCAC
AATTGTTGTAATGTAATGCTCAAATGGCCTTTTCTCCTTTTTTGA
Protein sequenceShow/hide protein sequence
MCKGVEEGNHSGGGGSGGCRQFREASMVMCELCNSRASLYCQADEAYLCRKCDKLVHGANFLAHRHIRCILCNFCQNLTEKYLARTSTELLLPAIVTCTQAHPCNNGNLH
NCCNVMLKWPFLLF