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Sed0001290 (gene) of Chayote v1 genome

Gene IDSed0001290
OrganismSechium edule (Chayote v1)
DescriptionEmbryo sac development arrest protein
Genome locationLG02:50369777..50371000
RNA-Seq ExpressionSed0001290
SyntenySed0001290
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597349.1 hypothetical protein SDJN03_10529, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4578.12Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYA
        MS+H HSRGL SAGPSRKRK   EP+A K GE  ++SNRLLAGYMAYEFLTKGTILGRKFDP RAEASP P A A++KK K+EAAPP+ +KKEHQIQSYA
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYA

Query:  DVATVLKTDGARISGIVNPTQLARWLDK
        DVAT+LKTD A+ISGIVNPTQLARWL K
Subjt:  DVATVLKTDGARISGIVNPTQLARWLDK

KGN56835.1 hypothetical protein Csa_009887 [Cucumis sativus]3.6e-4574.62Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAA--KWKKLKSEAAPPDTVKKEHQIQS
        MS+HFHSRGL SAGPS+KRKEP  P+A K GEP VSSNRLLAGYMAYEFLTKGT+ GRKFDP R EA+P  A+AA  +WKK KS+AAPP+ +KKEHQIQS
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAA--KWKKLKSEAAPPDTVKKEHQIQS

Query:  YADVATVLKTDGARISGIVNPTQLARWLDK
        YA+VA +LKT G+ ISGIVNPTQL RWL K
Subjt:  YADVATVLKTDGARISGIVNPTQLARWLDK

XP_008438490.1 PREDICTED: uncharacterized protein LOC103483571 [Cucumis melo]4.4e-4373.28Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAP-KPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEH--QIQ
        MS+HFHSRGL SAGPS+KRKEP  PA P K GEP V SNRLLAGYMAYEFLTKGT+ GRKFDP R EA+P  AA ++WKK K EAAPP+ +KKEH  QIQ
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAP-KPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEH--QIQ

Query:  SYADVATVLKTDGARISGIVNPTQLARWLDK
        SYA+VA +LKT G+ ISGIVNPTQL RWL K
Subjt:  SYADVATVLKTDGARISGIVNPTQLARWLDK

XP_023526927.1 uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo]2.2e-4275Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYA
        MS+HFHSRGL  AGPSRKRK   EPAA K  EP VSSNRLLAGYMAYEFLTKGTILGR+F+P RAEA  +P+AAA+WKK KSEAAPP+ +KKEHQIQSY 
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYA

Query:  DVATVLKTDGARISGIVNPTQLARWLDK
        +VAT+LKT G  I  IVNPTQL RWL K
Subjt:  DVATVLKTDGARISGIVNPTQLARWLDK

XP_023539410.1 uncharacterized protein LOC111800062 [Cucurbita pepo subsp. pepo]2.3e-4478.29Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPA-AAAKWKKLKSEAAPPDTVKKEHQIQSY
        MS+H HSRGL SAGPSRKRK   EP+A K GE  V+SNRLLAGYMAYEFLTKGTILGRKFDP RAEASP P  AAA++KK K+EAAPP+ +KKEHQIQSY
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPA-AAAKWKKLKSEAAPPDTVKKEHQIQSY

Query:  ADVATVLKTDGARISGIVNPTQLARWLDK
         DVAT+LKTD A+ISGIVNPTQLARWL K
Subjt:  ADVATVLKTDGARISGIVNPTQLARWLDK

TrEMBL top hitse value%identityAlignment
A0A0A0L4C1 Uncharacterized protein1.7e-4574.62Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAA--KWKKLKSEAAPPDTVKKEHQIQS
        MS+HFHSRGL SAGPS+KRKEP  P+A K GEP VSSNRLLAGYMAYEFLTKGT+ GRKFDP R EA+P  A+AA  +WKK KS+AAPP+ +KKEHQIQS
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAA--KWKKLKSEAAPPDTVKKEHQIQS

Query:  YADVATVLKTDGARISGIVNPTQLARWLDK
        YA+VA +LKT G+ ISGIVNPTQL RWL K
Subjt:  YADVATVLKTDGARISGIVNPTQLARWLDK

A0A1S3AWH5 uncharacterized protein LOC1034835712.1e-4373.28Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAP-KPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEH--QIQ
        MS+HFHSRGL SAGPS+KRKEP  PA P K GEP V SNRLLAGYMAYEFLTKGT+ GRKFDP R EA+P  AA ++WKK K EAAPP+ +KKEH  QIQ
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAP-KPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEH--QIQ

Query:  SYADVATVLKTDGARISGIVNPTQLARWLDK
        SYA+VA +LKT G+ ISGIVNPTQL RWL K
Subjt:  SYADVATVLKTDGARISGIVNPTQLARWLDK

A0A5A7U1L2 Uncharacterized protein2.1e-4373.28Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAP-KPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEH--QIQ
        MS+HFHSRGL SAGPS+KRKEP  PA P K GEP V SNRLLAGYMAYEFLTKGT+ GRKFDP R EA+P  AA ++WKK K EAAPP+ +KKEH  QIQ
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAP-KPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEH--QIQ

Query:  SYADVATVLKTDGARISGIVNPTQLARWLDK
        SYA+VA +LKT G+ ISGIVNPTQL RWL K
Subjt:  SYADVATVLKTDGARISGIVNPTQLARWLDK

A0A6J1E960 uncharacterized protein LOC1114318271.4e-4275Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYA
        MS+HFHSRGL  AGPSRKRK   EPAA K  EP VSSNRLLAGYMAYEFLTKGTILGR+F+P RAEA  +P+AAA+WKK KSEAAPP+ +KKEHQIQSY 
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYA

Query:  DVATVLKTDGARISGIVNPTQLARWLDK
        +VAT+LKT G  I  IVNPTQL RWL K
Subjt:  DVATVLKTDGARISGIVNPTQLARWLDK

A0A6J1IWN8 uncharacterized protein LOC1114792652.6e-4173.44Show/hide
Query:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYA
        MS+HFH RGL   GPSRKRK   EPAA K  EP VSSNRLLAGYMAYEFLTKGTILGR+F+P +AEA  +P+AAA+WKK KSEAAPP+ +KKEHQIQSY 
Subjt:  MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYA

Query:  DVATVLKTDGARISGIVNPTQLARWLDK
        +VAT+LKT GA I  IVNPTQL RWL K
Subjt:  DVATVLKTDGARISGIVNPTQLARWLDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein2.1e-1136.13Show/hide
Query:  PSRKRKEPPEPAAP-------KPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYADVATVLK
        PS   K  P P  P          EP  S+  +LAGY+++E+LT+GT+ G +++ ARA+A           K+K         + E + + Y +VA +L+
Subjt:  PSRKRKEPPEPAAP-------KPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYADVATVLK

Query:  TDGARISGIVNPTQLARWL
        +DGA++ GIVNP QLAR+L
Subjt:  TDGARISGIVNPTQLARWL

AT3G23440.1 embryo sac development arrest 62.7e-1445.13Show/hide
Query:  GPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYADVATVLKTDGARI
        G SRKRK+              + N LLAGYMA+E+LT GT+LGRK     AE  PL + +     L+S       VKK    QSY++VA+V KTDG  +
Subjt:  GPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYADVATVLKTDGARI

Query:  SGIVNPTQLARWL
         G+VNPTQLA+W+
Subjt:  SGIVNPTQLARWL

AT5G44060.1 unknown protein2.7e-1439.17Show/hide
Query:  PSRKRKEPPEPAAPKP--------GEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYADVATVL
        P  K      P  P+P         EP V SN+LLAGY+A+EFL  GT+ G  ++P +A+A PL   +   +K K      D    +H+ + Y +VA +L
Subjt:  PSRKRKEPPEPAAPKP--------GEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYADVATVL

Query:  KTDGARISGIVNPTQLARWL
        + DG  + GIVNP+QLAR+L
Subjt:  KTDGARISGIVNPTQLARWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACCATTTCCATAGCCGTGGGCTGTCATCGGCTGGGCCGTCAAGAAAGCGGAAGGAGCCGCCAGAGCCGGCGGCTCCTAAACCAGGCGAGCCGCAGGTTTCCTC
GAACCGGCTTCTGGCTGGCTACATGGCGTATGAGTTTCTAACTAAAGGAACCATCTTGGGCCGGAAGTTCGACCCGGCCCGAGCCGAAGCAAGCCCATTGCCTGCGGCCG
CCGCCAAGTGGAAGAAGCTGAAGTCGGAAGCCGCGCCGCCGGATACCGTCAAGAAAGAGCATCAGATTCAGAGCTACGCCGACGTGGCGACCGTTTTAAAGACGGATGGG
GCCCGGATATCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTGACAAATGA
mRNA sequenceShow/hide mRNA sequence
CCACTCTCTTTCTCTCTCTCTCTCCTTCAATTTCTTTATTGTAATTTCAACGGATTTTTTTTGCTCCGCCGTCATCTCCGCCGTTCCCCAGGTGGCGCCGCTACTTAACG
GCCCTCCGTACGCCGGTCCGATCACTGCCCTCAGGTTCCATCCGCCACCATCTACATCCGATTTCCCTAAAAACATTGACCCCTTTAATTTTAATTTTTTTTTAGTTTCC
ATTTCCAATTATTTTAAAAATAAAGCAAATTGTATTTTTTTTAAAATTTTTCTAATATAAAATTTAGTCGCTTTCAATACTTTTTCCCTTTCCGCCTTAACTTACGTTAT
TCCCCATTTTTAAACTTTTTTTTTCTTTTTATTTGAATAAAAAAAACTTTTTTTATTTTTACCATAATTTCTTTTTCACTTTTACACCTTTCGCCAAATTGTTCCGGGTA
AATAAGCAAAAAAGAAAAAAAAATCACATAATCTGATGTGACGATTTTGCCACTGAGAGCATAAGTTTTCTACGGTTCTGCCAACGAGGAATCCGAGTATTCGTTGGGGA
TTGGCTTACGTGGCATTCACTAAAGTGGCTTACGTGGCAAACGGCTCATGAGTTACCATTTCCATAGCCGTGGGCTGTCATCGGCTGGGCCGTCAAGAAAGCGGAAGGAG
CCGCCAGAGCCGGCGGCTCCTAAACCAGGCGAGCCGCAGGTTTCCTCGAACCGGCTTCTGGCTGGCTACATGGCGTATGAGTTTCTAACTAAAGGAACCATCTTGGGCCG
GAAGTTCGACCCGGCCCGAGCCGAAGCAAGCCCATTGCCTGCGGCCGCCGCCAAGTGGAAGAAGCTGAAGTCGGAAGCCGCGCCGCCGGATACCGTCAAGAAAGAGCATC
AGATTCAGAGCTACGCCGACGTGGCGACCGTTTTAAAGACGGATGGGGCCCGGATATCCGGCATCGTCAACCCGACCCAACTGGCTCGGTGGCTTGACAAATGATTTGGC
CACATGGCGAAATCCCATTGGTTGGCGCTATCTATGCTTCTTCTCCACGTCATATTTGACCGAGTCTTCGAGCTCATTGACCATTCAAAGAAACAGACTCTCAGTTATGG
CCGGCGGCCGGAAAATCAAAAGGCGGCGGAAGATTAGTTATTGTGAGATAAATAAATTTTATCTCAGTTGGGTTCCTTTTTTTTAATTTCATCTCATATATATGATTATA
ATCATGAGCTGGGC
Protein sequenceShow/hide protein sequence
MSYHFHSRGLSSAGPSRKRKEPPEPAAPKPGEPQVSSNRLLAGYMAYEFLTKGTILGRKFDPARAEASPLPAAAAKWKKLKSEAAPPDTVKKEHQIQSYADVATVLKTDG
ARISGIVNPTQLARWLDK