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Sed0001295 (gene) of Chayote v1 genome

Gene IDSed0001295
OrganismSechium edule (Chayote v1)
DescriptionRPM1-interacting protein 4-like
Genome locationLG01:4291220..4294291
RNA-Seq ExpressionSed0001295
SyntenySed0001295
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570949.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3593.51Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGG+PDSPAKDDP+YK+G VLGK QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

XP_022943908.1 RPM1-interacting protein 4-like [Cucurbita moschata]4.5e-3593.51Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGG+PDSPAKDDP+YK+G VLGK QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

XP_022947539.1 uncharacterized protein LOC111451376 isoform X1 [Cucurbita moschata]3.1e-3696.1Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGLPDSPAKDDPSYKHG VLGK+QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

XP_022947540.1 uncharacterized protein LOC111451376 isoform X2 [Cucurbita moschata]1.2e-3594.81Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGLPDSPAKDDPSYKHG VLGK+QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

XP_038902743.1 protein NOI4 [Benincasa hispida]7.7e-3592.21Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG+PDSPAKDDP+YK+G VLGK+QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

TrEMBL top hitse value%identityAlignment
A0A6J1G736 uncharacterized protein LOC111451376 isoform X11.5e-3696.1Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGLPDSPAKDDPSYKHG VLGK+QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

A0A6J1G769 uncharacterized protein LOC111451376 isoform X25.8e-3694.81Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGLPDSPAKDDPSYKHG VLGK+QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

A0A6J1I4X6 uncharacterized protein LOC111469905 isoform X25.8e-3694.81Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGLPDSPAKDDPSYKHG VLGK+QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

A0A6J1I7R1 uncharacterized protein LOC111469905 isoform X11.5e-3696.1Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGLPDSPAKDDPSYKHG VLGK+QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

A0A6J1J928 RPM1-interacting protein 4-like2.2e-3593.51Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGG+PDSPAKDDP+YK+G VLGK QPKKWFCCLQAAES
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES

SwissProt top hitse value%identityAlignment
O22633 Protein NOI46.0e-2267.11Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSY--KHGGVLGKAQPKKWFCCLQA
        M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKK GG P SP K    +    GG   K QPKKW CC+QA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSY--KHGGVLGKAQPKKWFCCLQA

Q8GYN5 RPM1-interacting protein 41.3e-0559.38Show/hide
Query:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKAG
        +PKFG+WD N+P+SA+G+T IFNK R E+ +G
Subjt:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKAG

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein3.5e-2568.92Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQA
        MA+KG   PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP KD+P Y   G + +   KKWFCC++A
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQA

AT4G35655.1 RPM1-interacting protein 4 (RIN4) family protein4.0e-1354.29Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFC
        MA    + PLPKFGEWDVNDPA+AEGFTVIF+KA  +KK G    S +K     K  GV      KKW C
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFC

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.1e-1860.76Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSY--KHGGVLGKAQPKKWFCCLQAAES
        M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKK GG P SP K    +    GG   K QP K    L A+ S
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSY--KHGGVLGKAQPKKWFCCLQAAES

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein4.1e-1863.38Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSY--KHGGVLGKAQPKKWFCCLQAAES
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKK GG P SP K    +    GG   K QP K    L A+ S
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSY--KHGGVLGKAQPKKWFCCLQAAES

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.6e-2270.59Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSY--KHGGVLGKAQPKKWFCCLQA
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKK GG P SP K    +    GG   K QPKKW CC+QA
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSY--KHGGVLGKAQPKKWFCCLQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAAAAGGCAGCAGTAGTCCATTGCCAAAGTTTGGCGAATGGGATGTCAATGATCCCGCATCTGCTGAGGGATTCACAGTAATCTTTAATAAAGCCAGGAACGA
GAAGAAGGCCGGTGGCTTGCCCGACTCTCCTGCAAAGGATGATCCTTCATACAAGCATGGGGGTGTTCTTGGAAAGGCTCAGCCTAAAAAATGGTTTTGCTGCTTGCAAG
CTGCGGAATCATGA
mRNA sequenceShow/hide mRNA sequence
GCCGCCGGGTCCCACTCTCCACTTCTCTATAAACATCGCCGATTAGCCCAAATTCTCTCAATTCAATCTTTACTTTATTTCTCATCATCACCATCATCATCATTCAAGCT
CATTCGCCCATGGCGGAAAAAGGCAGCAGTAGTCCATTGCCAAAGTTTGGCGAATGGGATGTCAATGATCCCGCATCTGCTGAGGGATTCACAGTAATCTTTAATAAAGC
CAGGAACGAGAAGAAGGCCGGTGGCTTGCCCGACTCTCCTGCAAAGGATGATCCTTCATACAAGCATGGGGGTGTTCTTGGAAAGGCTCAGCCTAAAAAATGGTTTTGCT
GCTTGCAAGCTGCGGAATCATGAGGCTTTCGGGCGCTCGATAGGCGGGGTTCAGCAGAAATGTATGATCTTCAAATTCTCGACACGACGTATATCTCTGCAAGGCTGAAG
CTATATTTAGAACTGTGATGGAAAATGCTGGACTCCATTTGTTAGAACTTGTCAATAATTTGGGGTTTGGAGATGAAGATGATTAAAACATCATTGTCTTTTTTATGTTC
TGCATAAATGACAATTGTTGAAGATCCTTGGTTATTTTCATCCCTCTTCCCTGCCCTCTACTTGTGAAATGATGTTAGTTTGTTTCAGTTTCTTGCCTGATTGATTTCAA
ATGTTTCTCTTTTTGTGTAATATCAAATTTTATGGTTTTATCTTTCTTTCTGCATGGAGAATGACTTCTAACTCCCCTTCTTTCTGATGAAAAACTATATAAATGAAAAG
TTGGGGAAAATTTGCC
Protein sequenceShow/hide protein sequence
MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGLPDSPAKDDPSYKHGGVLGKAQPKKWFCCLQAAES