; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001315 (gene) of Chayote v1 genome

Gene IDSed0001315
OrganismSechium edule (Chayote v1)
DescriptionScarecrow-like protein 5-like isoform X1
Genome locationLG03:8699038..8700522
RNA-Seq ExpressionSed0001315
SyntenySed0001315
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154992.1 uncharacterized protein LOC111022135 [Momordica charantia]6.0e-3971.31Show/hide
Query:  MKTLALISNPLFRFRFTTSPKPCVFPVNRRRTATFAAIHDA-----ADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDD
        M+ LA ISN LFRF      KP     NRR   T AAI+DA     ADP+Q+QITWQIA GAIAGVTPFVVAGIEFTKRI+AQ+RC+ECGGSGLV ++DD
Subjt:  MKTLALISNPLFRFRFTTSPKPCVFPVNRRRTATFAAIHDA-----ADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDD

Query:  YFRCPQCGGFLPWQSWKRFFSG
        YFRCPQCGGFLPWQSWKRFF G
Subjt:  YFRCPQCGGFLPWQSWKRFFSG

XP_022935718.1 uncharacterized protein LOC111442262 [Cucurbita moschata]3.0e-3867.16Show/hide
Query:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE
        M+ L  IS   FRF  T  TSP+P   FP+N        RRRT TFAAI        AADP QV+ITWQI  GAIAGVTPFVVAGIEF+KRI+AQKRCKE
Subjt:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE

Query:  CGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG
        CGGSGLV +D DYFRCP+CGGFLPWQSW+RFFSG
Subjt:  CGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG

XP_023005598.1 uncharacterized protein LOC111498537 [Cucurbita maxima]1.1e-3766.42Show/hide
Query:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE
        M+ L  IS   FRF  T   SP+P   FP+N        RRRT TFAAI        AADP QV+ITWQI  GAIAGVTPFVVAGIEF+KRI+AQKRCKE
Subjt:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE

Query:  CGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG
        CGGSGLV +D DYFRCP+CGGFLPWQSW+RFFSG
Subjt:  CGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG

XP_023540547.1 uncharacterized protein LOC111800877 isoform X1 [Cucurbita pepo subsp. pepo]1.3e-3665.69Show/hide
Query:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE
        M+ L  IS   FRF  T  TSP+P   FP+N        RRRT TFAAI        AADP QV+ITWQI  GAIAGVTPFVVAGIEF+KRI+AQKRCKE
Subjt:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE

Query:  CGGSGLVFIDDDYFRCPQC---GGFLPWQSWKRFFSG
        CGGSGLV +D DYFRCP+C   GGFLPWQSW+RFFSG
Subjt:  CGGSGLVFIDDDYFRCPQC---GGFLPWQSWKRFFSG

XP_038903334.1 uncharacterized protein LOC120089955 [Benincasa hispida]1.1e-3772.88Show/hide
Query:  ISNPLFRFR----FTTSPKPCVFPVNRRRTATFAAIHDA---ADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDDYFRC
        ISNPLF FR    F   P+      NRRRTAT+AAI  A   AD  QV+ITWQI  GAIAGVTPFVVAGIEF+KRIMAQKRCKECGGSGLV  DDDYFRC
Subjt:  ISNPLFRFR----FTTSPKPCVFPVNRRRTATFAAIHDA---ADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDDYFRC

Query:  PQCGGFLPWQSWKRFFSG
        P+CGGFLPWQSW+RFF G
Subjt:  PQCGGFLPWQSWKRFFSG

TrEMBL top hitse value%identityAlignment
A0A0A0L7H1 Uncharacterized protein3.0e-3667.2Show/hide
Query:  ALISNPLFRFRFTTSPKPCVFPV--------NRRRTATFAAIHDA----ADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFI
        AL+SNPL      T P    FP+        NRRRT  FAAI  A    AD  QVQITWQI  GAIAGVTPFVVAGIEF+KRI  QKRCKECGGSGLV  
Subjt:  ALISNPLFRFRFTTSPKPCVFPV--------NRRRTATFAAIHDA----ADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFI

Query:  DDDYFRCPQCGGFLPWQSWKRFFSG
        DDDYFRCP+CGGFLPWQSW+RFF G
Subjt:  DDDYFRCPQCGGFLPWQSWKRFFSG

A0A1S3BLU9 uncharacterized protein LOC1034910511.8e-3671.19Show/hide
Query:  ALISNPLFRFRFTTSPKPCVFPV-NRRRTATFAAIHD----AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDDYFRC
        ALISNPL         KP    + NRRRT  FAAI      AAD  QV+ITWQI  GAIAGVTPFVVAGIEF+KRIMAQKRCKECGGSGLV  DDDYFRC
Subjt:  ALISNPLFRFRFTTSPKPCVFPV-NRRRTATFAAIHD----AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDDYFRC

Query:  PQCGGFLPWQSWKRFFSG
        P CGGFLPWQSW+RFF G
Subjt:  PQCGGFLPWQSWKRFFSG

A0A6J1DN65 uncharacterized protein LOC1110221352.9e-3971.31Show/hide
Query:  MKTLALISNPLFRFRFTTSPKPCVFPVNRRRTATFAAIHDA-----ADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDD
        M+ LA ISN LFRF      KP     NRR   T AAI+DA     ADP+Q+QITWQIA GAIAGVTPFVVAGIEFTKRI+AQ+RC+ECGGSGLV ++DD
Subjt:  MKTLALISNPLFRFRFTTSPKPCVFPVNRRRTATFAAIHDA-----ADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDD

Query:  YFRCPQCGGFLPWQSWKRFFSG
        YFRCPQCGGFLPWQSWKRFF G
Subjt:  YFRCPQCGGFLPWQSWKRFFSG

A0A6J1FBA7 uncharacterized protein LOC1114422621.4e-3867.16Show/hide
Query:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE
        M+ L  IS   FRF  T  TSP+P   FP+N        RRRT TFAAI        AADP QV+ITWQI  GAIAGVTPFVVAGIEF+KRI+AQKRCKE
Subjt:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE

Query:  CGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG
        CGGSGLV +D DYFRCP+CGGFLPWQSW+RFFSG
Subjt:  CGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG

A0A6J1L2M2 uncharacterized protein LOC1114985375.5e-3866.42Show/hide
Query:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE
        M+ L  IS   FRF  T   SP+P   FP+N        RRRT TFAAI        AADP QV+ITWQI  GAIAGVTPFVVAGIEF+KRI+AQKRCKE
Subjt:  MKTLALISNPLFRFRFT--TSPKP-CVFPVN--------RRRTATFAAIHD------AADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKE

Query:  CGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG
        CGGSGLV +D DYFRCP+CGGFLPWQSW+RFFSG
Subjt:  CGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55570.1 unknown protein8.4e-3161.05Show/hide
Query:  VNRRRTATFAAIHDAAD----PAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG
        ++ RR  T +A+ + AD      + +ITWQI  G IAG+ PFVVAG+EF+KRI+AQKRC+ECGG+GLV  D  YFRCP+CGGFLPWQSW+RFF+G
Subjt:  VNRRRTATFAAIHDAAD----PAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDDYFRCPQCGGFLPWQSWKRFFSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACCTTAGCCCTAATTTCTAACCCTCTCTTCCGATTCCGATTCACTACGAGCCCTAAACCCTGCGTTTTCCCGGTAAATCGGAGACGAACAGCCACGTTCGCCGC
CATTCACGACGCAGCCGACCCCGCTCAGGTCCAAATCACTTGGCAAATCGCCGCCGGAGCGATTGCTGGAGTGACCCCGTTCGTGGTGGCCGGAATCGAGTTCACCAAGA
GAATTATGGCGCAAAAGAGATGTAAAGAATGTGGCGGTTCTGGCCTTGTTTTCATTGACGATGACTACTTCCGTTGCCCTCAATGCGGTGGTTTCTTGCCATGGCAGTCA
TGGAAGAGATTCTTTTCAGGTTGA
mRNA sequenceShow/hide mRNA sequence
GTCCCAAACAAAATCAACGAACCATTTTCCAATTTTCCCCTGATTTTCCATTACCTTACCTTCTTTCTCCAACCATGAAAACCTTAGCCCTAATTTCTAACCCTCTCTTC
CGATTCCGATTCACTACGAGCCCTAAACCCTGCGTTTTCCCGGTAAATCGGAGACGAACAGCCACGTTCGCCGCCATTCACGACGCAGCCGACCCCGCTCAGGTCCAAAT
CACTTGGCAAATCGCCGCCGGAGCGATTGCTGGAGTGACCCCGTTCGTGGTGGCCGGAATCGAGTTCACCAAGAGAATTATGGCGCAAAAGAGATGTAAAGAATGTGGCG
GTTCTGGCCTTGTTTTCATTGACGATGACTACTTCCGTTGCCCTCAATGCGGTGGTTTCTTGCCATGGCAGTCATGGAAGAGATTCTTTTCAGGTTGAAGAAGACATAAA
CCCCATAACATAATTCAACAGATTCAGAAGAAAATTGTTCAGGAAGATGAAGGTTTCATATAATTTGTATGTATTTGTGGTACAAAGCTAGCTATTCACAAGTTCTTATT
ACTTGCACAATGTTGATACAATTGCTAAATCCAAGTGTATAATATTGCCTATTAAGTTTCTAAGTTTTGTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTGAGAATTCA
TGTTTCAGCGCAGTGGAAATCATATGGATT
Protein sequenceShow/hide protein sequence
MKTLALISNPLFRFRFTTSPKPCVFPVNRRRTATFAAIHDAADPAQVQITWQIAAGAIAGVTPFVVAGIEFTKRIMAQKRCKECGGSGLVFIDDDYFRCPQCGGFLPWQS
WKRFFSG