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Sed0001325 (gene) of Chayote v1 genome

Gene IDSed0001325
OrganismSechium edule (Chayote v1)
DescriptionAn Arabidopsis thialiana chromosome BAC genomic sequence
Genome locationLG05:40129633..40130368
RNA-Seq ExpressionSed0001325
SyntenySed0001325
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605498.1 hypothetical protein SDJN03_02815, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4568.67Show/hide
Query:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR----------RRP
        MASVC+S+CI+D RVP+RPTYINLYKWPESDAEFIRSVSSK N   ++RVVDSISCRQMYLRSYTFSREEDN PE    CF K+  R          ++ 
Subjt:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR----------RRP

Query:  KKATADHGGD-KILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN
        KKA A+   + + + KCS LKKAKELSCAA TSVFRRLL CTAKVDVADN
Subjt:  KKATADHGGD-KILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN

XP_022146233.1 uncharacterized protein LOC111015497 [Momordica charantia]5.8e-4468.24Show/hide
Query:  MASVCVSSCIHDVR--VPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRF------RRRPKK
        MASVC+S+CI+D R  VP+RPTY NLY WPESDAEFIRSVSSK N   ++RVVDSI CRQMYLRSYTFSR++D+ PE    CF KL        RRR KK
Subjt:  MASVCVSSCIHDVR--VPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRF------RRRPKK

Query:  ATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADNI
        A  D    + + KCS LKKAKELSCAAFTSVFRRLL CTAKVDVADN+
Subjt:  ATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADNI

XP_022946966.1 uncharacterized protein LOC111450987 [Cucurbita moschata]2.1e-4669.13Show/hide
Query:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR----------RRP
        MASVC+S+CI+D RVP+RPTYINLYKWPESDAEFIRSVSSK N   ++RVVDSISCRQMYLRSYTFSREEDN PE    CF K+  R          ++ 
Subjt:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR----------RRP

Query:  KKATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN
        KKA A+    + + KCS LKKAKELSCAA TSVFRRLL CTAKVDVADN
Subjt:  KKATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN

XP_023006939.1 uncharacterized protein LOC111499579 [Cucurbita maxima]1.8e-4568Show/hide
Query:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR-----------RR
        MASVC+S+CI+D RVP+RPTYINLYKWPESDAEFIRSVSSK N   ++RVVDSISCRQMYLRSYTFSREEDN  E    CF K+  R           ++
Subjt:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR-----------RR

Query:  PKKATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN
         KKA A+    + + KCS LKKAKELSCAA TSVFRRLL CTAKVDVADN
Subjt:  PKKATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN

XP_023532318.1 uncharacterized protein LOC111794509 [Cucurbita pepo subsp. pepo]1.5e-4468.46Show/hide
Query:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKL---------RFRRRPK
        MASVC+S+CI+D RVP+RPTYINLYKWPESDAEFIRSVSSK N   ++RVVDSISCRQMYLRSYTFSREEDN  E    CF K+         R +++ K
Subjt:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKL---------RFRRRPK

Query:  KATADHGGD-KILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN
        KA A+   + + + KCS LKKAKELSCAA TSVFRRLL CTAKVDVADN
Subjt:  KATADHGGD-KILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN

TrEMBL top hitse value%identityAlignment
A0A0A0KET2 Uncharacterized protein6.3e-4468.92Show/hide
Query:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKN-CFRKL----RFRRRPKKATA
        MASVC+S+CI+D R+P+RPTYINLYKWPESDAEFIRSVSSK N   ++RVVDSISCRQMYLRSYTFSREE++ PE   N CF K+    R  RR KK TA
Subjt:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKN-CFRKL----RFRRRPKKATA

Query:  ---DHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADNI
              GD+ + K S LKKAKE+SCAA TSVFRRLL CTAKVDVAD +
Subjt:  ---DHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADNI

A0A5A7SXD3 Uncharacterized protein1.5e-4266.67Show/hide
Query:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKN-CFRKLRF-----RRRPKKAT
        MASVC+S+CI+D  +P+RPTYINLYKWPESDAEFIRSVSSK N   ++RVVDSISCRQMYLRSYTFSREE++ PE   N CF K+       RR+ KKA 
Subjt:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKN-CFRKLRF-----RRRPKKAT

Query:  A----DHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADNI
        A       GD+ + K S LKKAKE+SCAA TSVFRRLL CTAKVDVAD +
Subjt:  A----DHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADNI

A0A6J1CY16 uncharacterized protein LOC1110154972.8e-4468.24Show/hide
Query:  MASVCVSSCIHDVR--VPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRF------RRRPKK
        MASVC+S+CI+D R  VP+RPTY NLY WPESDAEFIRSVSSK N   ++RVVDSI CRQMYLRSYTFSR++D+ PE    CF KL        RRR KK
Subjt:  MASVCVSSCIHDVR--VPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRF------RRRPKK

Query:  ATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADNI
        A  D    + + KCS LKKAKELSCAAFTSVFRRLL CTAKVDVADN+
Subjt:  ATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADNI

A0A6J1G522 uncharacterized protein LOC1114509871.0e-4669.13Show/hide
Query:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR----------RRP
        MASVC+S+CI+D RVP+RPTYINLYKWPESDAEFIRSVSSK N   ++RVVDSISCRQMYLRSYTFSREEDN PE    CF K+  R          ++ 
Subjt:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR----------RRP

Query:  KKATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN
        KKA A+    + + KCS LKKAKELSCAA TSVFRRLL CTAKVDVADN
Subjt:  KKATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN

A0A6J1L3K0 uncharacterized protein LOC1114995798.7e-4668Show/hide
Query:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR-----------RR
        MASVC+S+CI+D RVP+RPTYINLYKWPESDAEFIRSVSSK N   ++RVVDSISCRQMYLRSYTFSREEDN  E    CF K+  R           ++
Subjt:  MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFR-----------RR

Query:  PKKATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN
         KKA A+    + + KCS LKKAKELSCAA TSVFRRLL CTAKVDVADN
Subjt:  PKKATADHGGDKILGKCSPLKKAKELSCAAFTSVFRRLLLCTAKVDVADN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46300.1 unknown protein8.4e-1741.1Show/hide
Query:  MASVCVSSCIHDVR--VPIRP--TYINLYKWPESDAEFIRSVSSKPNHPTS---TRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFRRRPKKA
        MAS C+  C++  R  + +RP  TY NLYKWP ++AEF+RS+    NH  S   T VVDSISCRQMYLRSYTFS EE+   E+      +   RR  +  
Subjt:  MASVCVSSCIHDVR--VPIRP--TYINLYKWPESDAEFIRSVSSKPNHPTS---TRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFRRRPKKA

Query:  TADHGGDKILGKCSPLKKAKELSCAAFT-SVFRRLLLCTAKVDVAD
            GG K   K + ++  K  SC  F   + R+ L C +   V +
Subjt:  TADHGGDKILGKCSPLKKAKELSCAAFT-SVFRRLLLCTAKVDVAD

AT3G46310.1 unknown protein1.5e-1346.05Show/hide
Query:  MASVCVSSCIH--DVRVPIRP--TYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDN
        MAS C+  C++  +  + +RP  T+  ++KWP ++ EF++S+ S+   P  T  V+S+SCRQMYLRSYTFSR+E+N
Subjt:  MASVCVSSCIH--DVRVPIRP--TYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDN

AT5G02640.1 unknown protein6.2e-2845Show/hide
Query:  MASVCVSSCI---HDVRVPIRP---TYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPE------NYKNCFRKLRFRR
        M SVC+SSCI   HD RVP+RP   +Y+NLYKWPESDAEF+RSV      P + RVVDSISCRQMYLRSYTFSRE+D             +C  +++   
Subjt:  MASVCVSSCI---HDVRVPIRP---TYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPE------NYKNCFRKLRFRR

Query:  RPKKATADHGGDKILGKCSP----------LKKAKELSCAAFTSVFRRLLLCTAKVDVAD
          ++ + +  G  I+    P           K  +E +C+    +FRRLL C A VDV D
Subjt:  RPKKATADHGGDKILGKCSP----------LKKAKELSCAAFTSVFRRLLLCTAKVDVAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTCTGCGTTTCGAGCTGCATCCACGACGTTCGGGTCCCGATCCGCCCCACCTACATCAACCTGTACAAGTGGCCCGAATCCGACGCCGAGTTCATCCGATC
CGTCAGCTCCAAACCCAACCACCCGACTTCGACCCGAGTCGTCGACAGCATCTCCTGCCGCCAGATGTACCTCCGAAGCTACACCTTCTCCAGAGAAGAGGACAACCCGC
CCGAAAACTATAAAAACTGCTTCCGAAAACTCCGATTCCGCCGCCGGCCAAAGAAGGCGACGGCGGACCACGGCGGCGATAAGATCCTCGGAAAGTGTTCGCCCTTGAAG
AAGGCCAAGGAGTTATCGTGCGCCGCTTTCACATCCGTGTTCCGGCGGTTGCTATTGTGCACCGCCAAAGTCGATGTTGCCGATAATATCATGAGAGATTAG
mRNA sequenceShow/hide mRNA sequence
TCTTTTTCCATGTTCTCAGACTCACACACTTTTCGCCTATAAATAAATAAAACCGCAACAAACCAATTCCACAAATTCCCTAATAAATCCGCCAATGGCTTCCGTCTGCG
TTTCGAGCTGCATCCACGACGTTCGGGTCCCGATCCGCCCCACCTACATCAACCTGTACAAGTGGCCCGAATCCGACGCCGAGTTCATCCGATCCGTCAGCTCCAAACCC
AACCACCCGACTTCGACCCGAGTCGTCGACAGCATCTCCTGCCGCCAGATGTACCTCCGAAGCTACACCTTCTCCAGAGAAGAGGACAACCCGCCCGAAAACTATAAAAA
CTGCTTCCGAAAACTCCGATTCCGCCGCCGGCCAAAGAAGGCGACGGCGGACCACGGCGGCGATAAGATCCTCGGAAAGTGTTCGCCCTTGAAGAAGGCCAAGGAGTTAT
CGTGCGCCGCTTTCACATCCGTGTTCCGGCGGTTGCTATTGTGCACCGCCAAAGTCGATGTTGCCGATAATATCATGAGAGATTAGGGATTGGTATTTTGATTTTGATTT
GCTTTTTGGTTCACTTTTTTTATTCTTAGTGGTTTTCTGTGGTGATGGCGAAGGTGTACGGAAAATATATGTAAATTGGATTTGAAGTTGTTTTAGGGAGATTATATTTT
TTTATTTATAATTTTCATGTCCGAGAAAAAAATGTTGCAATAATATGATATAATGGGTTTTCTTTTAACTATTCTC
Protein sequenceShow/hide protein sequence
MASVCVSSCIHDVRVPIRPTYINLYKWPESDAEFIRSVSSKPNHPTSTRVVDSISCRQMYLRSYTFSREEDNPPENYKNCFRKLRFRRRPKKATADHGGDKILGKCSPLK
KAKELSCAAFTSVFRRLLLCTAKVDVADNIMRD