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Sed0001334 (gene) of Chayote v1 genome

Gene IDSed0001334
OrganismSechium edule (Chayote v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationLG08:35439882..35440229
RNA-Seq ExpressionSed0001334
SyntenySed0001334
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]4.7e-1246.67Show/hide
Query:  MAAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPY
        +AAE + +W+ M++ FCV+SAI IATVSV I+T+L   F  LS+A+++CF   V A++I+   + +S+ILYC+GG  + ++ F+A AIPY
Subjt:  MAAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPY

KAF3947053.1 hypothetical protein CMV_026760 [Castanea mollissima]2.4e-0840.38Show/hide
Query:  QWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFLF
        +W ++ VTFC+ASAI IA VSVQ+ ++LS  FH LSL +++ F+  V +K I  +    +Q+L   G F+ +TAFF+AI IP+  + +  ++A+Y     
Subjt:  QWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFLF

Query:  ASFI
        A  I
Subjt:  ASFI

KAF3947054.1 hypothetical protein CMV_026761 [Castanea mollissima]4.4e-1043.81Show/hide
Query:  MQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFL
        M W ++M+ FC+ASAI IA VSVQ+Q +LS  FH LSLA++  F+    ++ I  +    +Q+L  +G F+ VTAFF+AI IP+  + +  T+AIY   +
Subjt:  MQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFL

Query:  FASFI
         A FI
Subjt:  FASFI

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]4.0e-1954.87Show/hide
Query:  AAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAI
        AAE + +W+ M+V FCV+SAIAIATVSVQI+ KL  +F+FLSL L++CF F    K+     +RVS+ILYC+GG   VTA F+A AIPY+ +FQII F I
Subjt:  AAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAI

Query:  YLTF-LFASFISH
        YL F L    ++H
Subjt:  YLTF-LFASFISH

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2972.97Show/hide
Query:  AAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAI
        A E LMQWE MMVTFC+ +AIAIATVSVQIQTKLS MF FLS ALM CF FT +AKLI H  QRVS ILY +GGF FVTAFF+AIAIPY+FHFQI+T A+
Subjt:  AAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAI

Query:  YLTFLFASFIS
        YL FLF +  S
Subjt:  YLTFLFASFIS

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein1.3e-1245.61Show/hide
Query:  MAAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFA
        + AE + + ++M++ FC++SAI IATVSVQ +TKL   F FLS+A++ICF     A++I    + +S+ILYC GGF   T  F+A AIPY  HF II   
Subjt:  MAAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFA

Query:  IYLTF--LFASFIS
        +Y  F  +F   IS
Subjt:  IYLTF--LFASFIS

A0A0A0LQB6 Uncharacterized protein5.3e-1752.29Show/hide
Query:  MAAERLMQWEKMMVTFCVASAIAIATVSVQIQT--KLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIIT
        M AE + +W++M+V  CV+SAI IATVSVQI+T  +L   F FLS+ +++CF F   AK+     + VS+ILYC+GGF  VTAFF+A AIP++ +FQII 
Subjt:  MAAERLMQWEKMMVTFCVASAIAIATVSVQIQT--KLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIIT

Query:  FAIYLTFLF
        F +YL F F
Subjt:  FAIYLTFLF

A0A0A0LSX4 Uncharacterized protein1.7e-1245.74Show/hide
Query:  MAAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHF
        +AAE + +W+ M++ FCV+SAI IATVSV I+T+L   F  LS+A+++CF   V A++I+   + +S+ILYC+GG  + ++ F+A AIPY+  F
Subjt:  MAAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHF

A0A7N2M5A3 Uncharacterized protein5.6e-1144.76Show/hide
Query:  MQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFL
        M W ++M+ FC+ASAI IA VSVQ+  +LS  FH LSLA +  F+    ++ I  +    +Q+L  +G F+ VTAFF+AIAIP+  + +  T+AIY   +
Subjt:  MQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFL

Query:  FASFI
        FA FI
Subjt:  FASFI

A0A7N2R866 Uncharacterized protein2.1e-1039.05Show/hide
Query:  MQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFL
        M+W ++++ FC+ASA+ IA +SVQ+ T+L  +FH  SLA+++ F+  V +K I+ +  R +Q+L   G F+ VTAFF+AI IP+ F+ +  ++ +Y    
Subjt:  MQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFL

Query:  FASFI
         A  I
Subjt:  FASFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGGAGAGGTTAATGCAATGGGAAAAAATGATGGTTACATTTTGCGTAGCCTCAGCGATTGCTATAGCTACTGTTTCTGTCCAAATTCAAACCAAGTTGTCTTT
CATGTTTCATTTTTTGTCACTTGCGTTAATGATCTGCTTTTCTTTCACAGTCACAGCCAAACTCATTCACCATCAAAGCCAAAGGGTTTCTCAAATTCTCTACTGTATTG
GTGGGTTTTGGTTTGTGACTGCCTTCTTTTTGGCCATTGCCATTCCTTATTCCTTCCACTTTCAAATTATAACCTTCGCCATCTATCTCACGTTTTTGTTTGCTTCTTTT
ATCTCCCATTTCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGGAGAGGTTAATGCAATGGGAAAAAATGATGGTTACATTTTGCGTAGCCTCAGCGATTGCTATAGCTACTGTTTCTGTCCAAATTCAAACCAAGTTGTCTTT
CATGTTTCATTTTTTGTCACTTGCGTTAATGATCTGCTTTTCTTTCACAGTCACAGCCAAACTCATTCACCATCAAAGCCAAAGGGTTTCTCAAATTCTCTACTGTATTG
GTGGGTTTTGGTTTGTGACTGCCTTCTTTTTGGCCATTGCCATTCCTTATTCCTTCCACTTTCAAATTATAACCTTCGCCATCTATCTCACGTTTTTGTTTGCTTCTTTT
ATCTCCCATTTCACTTAG
Protein sequenceShow/hide protein sequence
MAAERLMQWEKMMVTFCVASAIAIATVSVQIQTKLSFMFHFLSLALMICFSFTVTAKLIHHQSQRVSQILYCIGGFWFVTAFFLAIAIPYSFHFQIITFAIYLTFLFASF
ISHFT