; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001342 (gene) of Chayote v1 genome

Gene IDSed0001342
OrganismSechium edule (Chayote v1)
DescriptionB3 domain-containing protein At2g31420-like
Genome locationLG03:44991673..44992127
RNA-Seq ExpressionSed0001342
SyntenySed0001342
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586098.1 hypothetical protein SDJN03_18831, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2246.04Show/hide
Query:  PDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHW
        PD+PTR RK+IE EM   +  +VI K+L+ +D+  +   L + I K+ F F+T  E +LLN+             Q +   FL K  I+  D YCLTTHW
Subjt:  PDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHW

Query:  SSFVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF
        +SFV  N LK+G +IQLWSFRRV LVD   + FTSDL F
Subjt:  SSFVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF

KAG6586099.1 hypothetical protein SDJN03_18832, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2145.14Show/hide
Query:  YYQSMPDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYC
        +  S PDIPTR RKKIED MH  +  MVI K+L+  D+  +   +   I  + FDF+T +E E+LN+             Q +    L K  I+  D Y 
Subjt:  YYQSMPDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYC

Query:  LTTHWSSFVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF
         TTHW+SFV  N LK G +IQLWSFRRV LVD   + FTSDL F
Subjt:  LTTHWSSFVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF

KAG6586100.1 hypothetical protein SDJN03_18833, partial [Cucurbita argyrosperma subsp. sororia]7.5e-2047.45Show/hide
Query:  IPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSS
        +PT  RK+IED MH  +  +VI K+L+ +D+  E+  L   I K+ FDF+T  E ELLN+             Q +   FL K  I+ QD Y  TTHW+S
Subjt:  IPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSS

Query:  FVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF
        FV  N LKLG +IQLWSFRRV LVD   + FTSDL F
Subjt:  FVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF

XP_022938317.1 B3 domain-containing protein At2g31420-like [Cucurbita moschata]7.5e-2047.45Show/hide
Query:  IPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSS
        +PT  RK+IED MH  +  +VI K+L+ +D+  E+  L   I K+ FDF+T  E ELLN+             Q +   FL K  I+ QD Y  TTHW+S
Subjt:  IPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSS

Query:  FVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF
        FV  N LKLG +IQLWSFRRV LVD   + FTSDL F
Subjt:  FVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF

XP_022938320.1 B3 domain-containing protein At1g05930-like [Cucurbita moschata]7.2e-2346.76Show/hide
Query:  PDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHW
        PD+PTR RK+IE EM   +  +VI K+L+ +D+  +   L + I K+ FDF+T  E +LLN+             Q +   FL K  I+  D YCLTTHW
Subjt:  PDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHW

Query:  SSFVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF
        +SFV  N LK+G +IQLWSFRRV LVD   + FTSDL F
Subjt:  SSFVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF

TrEMBL top hitse value%identityAlignment
A0A6J1FDQ3 B3 domain-containing protein At2g31420-like3.6e-2047.45Show/hide
Query:  IPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSS
        +PT  RK+IED MH  +  +VI K+L+ +D+  E+  L   I K+ FDF+T  E ELLN+             Q +   FL K  I+ QD Y  TTHW+S
Subjt:  IPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSS

Query:  FVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF
        FV  N LKLG +IQLWSFRRV LVD   + FTSDL F
Subjt:  FVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF

A0A6J1FIJ8 B3 domain-containing protein At2g31420-like8.9e-1944.7Show/hide
Query:  RKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSSFVQTN
        RKKIED MH  +  MVI K+L+  D+  +   +   I  + FDF+T +E E+LN+             Q +   FL K  IE  D Y  TTHW+SFV  N
Subjt:  RKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSSFVQTN

Query:  ALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF
         LK G +IQLWSFRRV L+D   + FTSDL F
Subjt:  ALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF

A0A6J1FJF6 B3 domain-containing protein At1g05930-like3.5e-2346.76Show/hide
Query:  PDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHW
        PD+PTR RK+IE EM   +  +VI K+L+ +D+  +   L + I K+ FDF+T  E +LLN+             Q +   FL K  I+  D YCLTTHW
Subjt:  PDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHW

Query:  SSFVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF
        +SFV  N LK+G +IQLWSFRRV LVD   + FTSDL F
Subjt:  SSFVQTNALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF

A0A6J1FKX3 putative B3 domain-containing protein At3g248501.4e-1135.11Show/hide
Query:  YQSMPDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNNNQSIQQHFLAKCTIE-----------------SQ
        Y S+P++    R++I  EM      +VI KQ+ H+D+      L +PINK++FDF T++E ELLN +++  +  +    I+                 S 
Subjt:  YQSMPDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNNNQSIQQHFLAKCTIE-----------------SQ

Query:  DYYCLTTHWSSFVQTNALKLGQVIQLWSFRR
        D YCL T W+++V+  AL+ G+ IQLWSFR+
Subjt:  DYYCLTTHWSSFVQTNALKLGQVIQLWSFRR

A0A6J1I325 B3 domain-containing protein At2g31420-like2.6e-1845.45Show/hide
Query:  RKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSSFVQTN
        RK+IED MH  +  MVI K+L+  D+  +   +   I  V FDF+T +E ELLN+             Q +   FL K  I+  D Y  TTHW+SFV  N
Subjt:  RKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNN------------NQSIQQHFLAKCTIESQDYYCLTTHWSSFVQTN

Query:  ALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF
         LK G +IQLWSFRRV LVD   + FTSDL F
Subjt:  ALKLGQVIQLWSFRRVGLVDPLTQTFTSDLCF

SwissProt top hitse value%identityAlignment
Q5RM09 B3 domain-containing protein At1g059203.2e-0533.04Show/hide
Query:  MVILKQLVHSDLEGEQPSLLIPINKV-QFDFVTQQESELLNN-----------------------NQSIQQHFLAKCTIESQDYYCLTTHWSSFVQTNAL
        ++I K L  +D++  Q  L IPIN V Q DF+T  ES L++                        N   +Q F+   +  S   + L   WS+ V+TN L
Subjt:  MVILKQLVHSDLEGEQPSLLIPINKV-QFDFVTQQESELLNN-----------------------NQSIQQHFLAKCTIESQDYYCLTTHWSSFVQTNAL

Query:  KLGQVIQLWSFR
        K G  I LWSFR
Subjt:  KLGQVIQLWSFR

Arabidopsis top hitse value%identityAlignment
AT1G05920.1 Domain of unknown function (DUF313)2.3e-0633.04Show/hide
Query:  MVILKQLVHSDLEGEQPSLLIPINKV-QFDFVTQQESELLNN-----------------------NQSIQQHFLAKCTIESQDYYCLTTHWSSFVQTNAL
        ++I K L  +D++  Q  L IPIN V Q DF+T  ES L++                        N   +Q F+   +  S   + L   WS+ V+TN L
Subjt:  MVILKQLVHSDLEGEQPSLLIPINKV-QFDFVTQQESELLNN-----------------------NQSIQQHFLAKCTIESQDYYCLTTHWSSFVQTNAL

Query:  KLGQVIQLWSFR
        K G  I LWSFR
Subjt:  KLGQVIQLWSFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAATGGTACCCGTGTATTACCAATCAATGCCAGACATTCCGACTCGAACGAGAAAGAAAATCGAGGATGAAATGCACAAAACCTCATTCATCATGGTGATTTT
GAAGCAATTAGTGCACTCTGATCTCGAAGGGGAACAACCAAGTTTACTCATTCCAATCAACAAAGTCCAATTCGATTTCGTCACACAACAAGAAAGCGAGCTTTTGAACA
ACAACCAATCAATCCAACAACATTTCTTGGCCAAATGCACCATTGAGTCCCAAGATTATTACTGTCTGACCACTCATTGGAGTTCTTTTGTCCAAACCAATGCATTGAAA
CTTGGCCAAGTGATCCAGCTTTGGAGCTTCAGAAGAGTTGGGCTTGTTGACCCTCTTACTCAAACTTTCACCTCTGATCTTTGCTTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAATGGTACCCGTGTATTACCAATCAATGCCAGACATTCCGACTCGAACGAGAAAGAAAATCGAGGATGAAATGCACAAAACCTCATTCATCATGGTGATTTT
GAAGCAATTAGTGCACTCTGATCTCGAAGGGGAACAACCAAGTTTACTCATTCCAATCAACAAAGTCCAATTCGATTTCGTCACACAACAAGAAAGCGAGCTTTTGAACA
ACAACCAATCAATCCAACAACATTTCTTGGCCAAATGCACCATTGAGTCCCAAGATTATTACTGTCTGACCACTCATTGGAGTTCTTTTGTCCAAACCAATGCATTGAAA
CTTGGCCAAGTGATCCAGCTTTGGAGCTTCAGAAGAGTTGGGCTTGTTGACCCTCTTACTCAAACTTTCACCTCTGATCTTTGCTTTCAATAA
Protein sequenceShow/hide protein sequence
MAEMVPVYYQSMPDIPTRTRKKIEDEMHKTSFIMVILKQLVHSDLEGEQPSLLIPINKVQFDFVTQQESELLNNNQSIQQHFLAKCTIESQDYYCLTTHWSSFVQTNALK
LGQVIQLWSFRRVGLVDPLTQTFTSDLCFQ