; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001350 (gene) of Chayote v1 genome

Gene IDSed0001350
OrganismSechium edule (Chayote v1)
DescriptiontRNA-intron lyase
Genome locationLG05:39879036..39881467
RNA-Seq ExpressionSed0001350
SyntenySed0001350
Gene Ontology termsGO:0000379 - tRNA-type intron splice site recognition and cleavage (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0000214 - tRNA-intron endonuclease complex (cellular component)
GO:0000213 - tRNA-intron endonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR006676 - tRNA-splicing endonuclease
IPR006677 - tRNA intron endonuclease, catalytic domain-like
IPR006678 - tRNA intron endonuclease, N-terminal
IPR011856 - tRNA endonuclease-like domain superfamily
IPR036167 - tRNA intron endonuclease, catalytic domain-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605517.1 tRNA-splicing endonuclease subunit Sen2-2, partial [Cucurbita argyrosperma subsp. sororia]9.3e-11182.77Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M  RWKGKGSEAKALADPMSKI+L+LQSSLTQS+AQGLLSS SVLYQA+EEQ A+LLNRACFGRPI+S++KDKQWFQ GMEEAFYLS+HLNC KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        CEKNF +LWLY+KS    FPEFY AY+NLR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EGEG N+NGRLRVWSDFLCTIRLCGSVAKTLL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA
        TVN NG+ S S  CLD YSIEERT++RWSPE CRE+PA
Subjt:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA

KAG7035455.1 tRNA-splicing endonuclease subunit Sen2-2, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-11182.77Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M  RWKGKGSEAKALADPMSKI+L+LQSSLTQS+AQGLLSS SVLYQA+EEQ A+LLNRACFGRPI+S++KDKQWFQ GMEEAFYLS+HLNC KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        CEKNF +LWLY+KS    FPEFY AY+NLR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EGEG N+NGRLRVWSDFLCTIRLCGSVAKTLL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA
        TVN NG+ S S  CLD YSIEERT++RWSPE CRE+PA
Subjt:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA

XP_022947592.1 tRNA-splicing endonuclease subunit Sen2-1-like isoform X1 [Cucurbita moschata]1.9e-11182.77Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M PRWKGKGSEAKALADP+SKI+L+LQSSLTQS+AQGLLSS SVLYQA+EEQ A+LLNRACFGRPI+S++KDKQWFQ GMEEAFYLS++LNC KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        CEKNF +LWLY+KS    FPEFY AY+NLR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EGEGSN+NGRLRVWSDFLCTIRLCGSVAKTLL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA
        TVN NG+ S S  CLD YSIEERT++RWSPE CRE+PA
Subjt:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA

XP_022947593.1 tRNA-splicing endonuclease subunit Sen2-1-like isoform X2 [Cucurbita moschata]1.9e-11182.77Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M PRWKGKGSEAKALADP+SKI+L+LQSSLTQS+AQGLLSS SVLYQA+EEQ A+LLNRACFGRPI+S++KDKQWFQ GMEEAFYLS++LNC KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        CEKNF +LWLY+KS    FPEFY AY+NLR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EGEGSN+NGRLRVWSDFLCTIRLCGSVAKTLL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA
        TVN NG+ S S  CLD YSIEERT++RWSPE CRE+PA
Subjt:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA

XP_023532286.1 tRNA-splicing endonuclease subunit Sen2-1-like [Cucurbita pepo subsp. pepo]8.4e-11283.19Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M PRWKGKGSEAKALADPMSKI+L+LQSSLTQS+AQGLLSS SVLYQA+EEQ A+LLNRACFGRPI+S++KDKQWFQ GMEEAFYLS+HLNC KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        CEKNF +LW Y+KS    FPEFY AY+NLR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EGEGSN+NGRLRVWSDFLCTIRLCGSVAKTLL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA
        TVN NG+ S S  CLD YSIEERT++RWSPE CRE+PA
Subjt:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA

TrEMBL top hitse value%identityAlignment
A0A6J1CYW3 tRNA-intron lyase4.3e-10680.08Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M PRWKGKGSEAKALADPMSKI+L+LQSSLTQS+AQGLLS  SVLYQA+EEQ   L NRACFGRPI+++DKDKQWFQLG+EEAFYLS HL C KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEG-SNDNGRLRVWSDFLCTIRLCGSVAKTLLL
        CEKN +QLW Y+KS    FPEFY AY++LR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EG G SN+NGRLRVWSDFLCTIRLCGSVAKTLL+
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEG-SNDNGRLRVWSDFLCTIRLCGSVAKTLLL

Query:  LTVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPAKV
        L+VN NGS S S   LD YSIEERT++RWSPE CRE+PAKV
Subjt:  LTVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPAKV

A0A6J1G6W2 tRNA-intron lyase9.0e-11282.77Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M PRWKGKGSEAKALADP+SKI+L+LQSSLTQS+AQGLLSS SVLYQA+EEQ A+LLNRACFGRPI+S++KDKQWFQ GMEEAFYLS++LNC KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        CEKNF +LWLY+KS    FPEFY AY+NLR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EGEGSN+NGRLRVWSDFLCTIRLCGSVAKTLL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA
        TVN NG+ S S  CLD YSIEERT++RWSPE CRE+PA
Subjt:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA

A0A6J1G716 tRNA-intron lyase9.0e-11282.77Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M PRWKGKGSEAKALADP+SKI+L+LQSSLTQS+AQGLLSS SVLYQA+EEQ A+LLNRACFGRPI+S++KDKQWFQ GMEEAFYLS++LNC KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        CEKNF +LWLY+KS    FPEFY AY+NLR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EGEGSN+NGRLRVWSDFLCTIRLCGSVAKTLL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA
        TVN NG+ S S  CLD YSIEERT++RWSPE CRE+PA
Subjt:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA

A0A6J1L2V2 tRNA-intron lyase1.1e-10981.51Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M PRWKGKGSEAKALADPMSKI+ +LQSSL QS+AQGLLSS SVLYQA+EEQ A+LLNRACFGRPI+S++KDKQWFQ GMEEAFYL +HLNC KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        CE NF++LW Y+KS N  FPEFY AY+NLR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EGEGSN+NGRLRVWSDFLCTIRLCGSVAKTLL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA
        TVN NG+ S S  CLD YSIEERT++ WSPE CRE+PA
Subjt:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA

A0A6J1L4U3 tRNA-intron lyase1.1e-10981.51Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        M PRWKGKGSEAKALADPMSKI+ +LQSSL QS+AQGLLSS SVLYQA+EEQ A+LLNRACFGRPI+S++KDKQWFQ GMEEAFYL +HLNC KIVDGQ+
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        CE NF++LW Y+KS N  FPEFY AY+NLR+KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL EGEGSN+NGRLRVWSDFLCTIRLCGSVAKTLL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA
        TVN NG+ S S  CLD YSIEERT++ WSPE CRE+PA
Subjt:  TVNYNGSGSDSHLCLDGYSIEERTISRWSPELCRESPA

SwissProt top hitse value%identityAlignment
C3MQX7 tRNA-splicing endonuclease1.2e-0727.41Show/hide
Query:  QGLLSSSSVLYQANEEQEAQLLNRACFGRPI-LSSDKDK----QWFQLGMEEAFYLSHHLNCFKIVDGQNCEKNFQQLWLYLKSLNPRFPEFYAAYRNLR
        + LL  S VL   N ++   + +   +G+ I +S  KD     +  +L + E+ YL+      K++D       +++L+ Y   +  +F   Y  Y +LR
Subjt:  QGLLSSSSVLYQANEEQEAQLLNRACFGRPI-LSSDKDK----QWFQLGMEEAFYLSHHLNCFKIVDGQNCEKNFQQLWLYLKSLNPRFPEFYAAYRNLR

Query:  VKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL
         K ++VR G +YG DF  Y   P L H+ + V+ +
Subjt:  VKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVL

Q4JAF4 tRNA-splicing endonuclease4.0e-0829.14Show/hide
Query:  QGLLSSSSVLYQANEEQEAQLLNRACFGRPI-----LSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQNCEKNFQQLWLYLKSLN--PRFPEFYAAYRN
        QG +    VL   + E+  ++     +G+P+      S +  K+   L + EA YLS      KI++     K      LY   +   PRF   Y  Y +
Subjt:  QGLLSSSSVLYQANEEQEAQLLNRACFGRPI-----LSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQNCEKNFQQLWLYLKSLN--PRFPEFYAAYRN

Query:  LRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLLTVN
        LR K +VVR G +YG DF  Y   P L H+ + V+ + E +  + N       + L   R+  S  K L+L  VN
Subjt:  LRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLLTVN

Q5Z6B1 Probable tRNA-splicing endonuclease subunit Sen28.8e-5650.41Show/hide
Query:  PRWK----GKGSEAKALADPMSKIILELQSSLTQSNAQGLLS---SSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKI
        PRWK    GK   + A A+PMS I+ EL++S   S    +LS    S+VL    E  +A +LNRA FG  I ++   K WFQL  EE FYL H LNC ++
Subjt:  PRWK----GKGSEAKALADPMSKIILELQSSLTQSNAQGLLS---SSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKI

Query:  VDGQNCEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEG-EGSNDNGRLRVWSDFLCTIRLCGSVA
            N + +  +LW Y +S +  FPE Y AY +LR+KNWVVR G QYG DFVAYRHHPALVHSEFAV+V+ EG E  N  GRL VWSD LC +R  GSVA
Subjt:  VDGQNCEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEG-EGSNDNGRLRVWSDFLCTIRLCGSVA

Query:  KTLLLLTVNYNGSGS-DSHLCLDGYSIEERTISRWSPELCRE
        KTLL+LT++ +      S  CL+   + ERTI+RW  + CRE
Subjt:  KTLLLLTVNYNGSGS-DSHLCLDGYSIEERTISRWSPELCRE

Q9LSS3 tRNA-splicing endonuclease subunit Sen2-21.1e-7158.23Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        MAPRWK KG+EAKALA+P+SK + ELQ SL ++ + G LSS +VL  A E ++A+LL+R CFGR +LS++K K+W QL  EEAF+L ++L C KI     
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        C +N    WLY+KS  P FP F+ AY +LR KNWV+R G QYGVDFVAYRHHP+LVHSE++VLV      S D+ RLRVWSD  C +RL GSVAKTLL L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHL--CLDGYSIEERTISRWSPELCRE
         VN N  G D +L  CL+ +++EE+TISRWSPEL RE
Subjt:  TVNYNGSGSDSHL--CLDGYSIEERTISRWSPELCRE

Q9M1E8 tRNA-splicing endonuclease subunit Sen2-13.2e-6654.77Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        MAPRWK KG+EAKALA+P+SK + EL+SSLTQ+ A G LSS +VL    E +EA+LL+R CFGR ++ ++KDK+W QL  EEAF+L + L C KI     
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
          +N   LW  + S    F   Y AY +LR KNW+VR G QYGVDFV YRHHP+LVHSE+AVLV  +  G ND  RL+VWSD  C++RL GSVAK+LL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVN--YNGSGSDSHLCLDGYSIEERTISRWSPELCRESPAK
         VN   N    +  LCL+ Y++EE+TI RWSPEL RE   +
Subjt:  TVN--YNGSGSDSHLCLDGYSIEERTISRWSPELCRESPAK

Arabidopsis top hitse value%identityAlignment
AT3G45577.1 tRNA-intron endonucleases4.6e-1542.42Show/hide
Query:  AQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQNCEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKN
        A G LSS +V       ++A+LL+R CFGR +  ++KDK+W QL  EEAF+L + L C KI        N   LW  ++S  P F   Y AY +LR KN
Subjt:  AQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQNCEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKN

AT3G45590.1 splicing endonuclease 12.3e-6754.77Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        MAPRWK KG+EAKALA+P+SK + EL+SSLTQ+ A G LSS +VL    E +EA+LL+R CFGR ++ ++KDK+W QL  EEAF+L + L C KI     
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
          +N   LW  + S    F   Y AY +LR KNW+VR G QYGVDFV YRHHP+LVHSE+AVLV  +  G ND  RL+VWSD  C++RL GSVAK+LL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVN--YNGSGSDSHLCLDGYSIEERTISRWSPELCRESPAK
         VN   N    +  LCL+ Y++EE+TI RWSPEL RE   +
Subjt:  TVN--YNGSGSDSHLCLDGYSIEERTISRWSPELCRESPAK

AT3G45590.2 splicing endonuclease 12.3e-6754.77Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        MAPRWK KG+EAKALA+P+SK + EL+SSLTQ+ A G LSS +VL    E +EA+LL+R CFGR ++ ++KDK+W QL  EEAF+L + L C KI     
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
          +N   LW  + S    F   Y AY +LR KNW+VR G QYGVDFV YRHHP+LVHSE+AVLV  +  G ND  RL+VWSD  C++RL GSVAK+LL+L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVN--YNGSGSDSHLCLDGYSIEERTISRWSPELCRESPAK
         VN   N    +  LCL+ Y++EE+TI RWSPEL RE   +
Subjt:  TVN--YNGSGSDSHLCLDGYSIEERTISRWSPELCRESPAK

AT5G60230.1 splicing endonuclease 28.2e-7358.23Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        MAPRWK KG+EAKALA+P+SK + ELQ SL ++ + G LSS +VL  A E ++A+LL+R CFGR +LS++K K+W QL  EEAF+L ++L C KI     
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        C +N    WLY+KS  P FP F+ AY +LR KNWV+R G QYGVDFVAYRHHP+LVHSE++VLV      S D+ RLRVWSD  C +RL GSVAKTLL L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHL--CLDGYSIEERTISRWSPELCRE
         VN N  G D +L  CL+ +++EE+TISRWSPEL RE
Subjt:  TVNYNGSGSDSHL--CLDGYSIEERTISRWSPELCRE

AT5G60230.2 splicing endonuclease 28.2e-7358.23Show/hide
Query:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN
        MAPRWK KG+EAKALA+P+SK + ELQ SL ++ + G LSS +VL  A E ++A+LL+R CFGR +LS++K K+W QL  EEAF+L ++L C KI     
Subjt:  MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQN

Query:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL
        C +N    WLY+KS  P FP F+ AY +LR KNWV+R G QYGVDFVAYRHHP+LVHSE++VLV      S D+ RLRVWSD  C +RL GSVAKTLL L
Subjt:  CEKNFQQLWLYLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLL

Query:  TVNYNGSGSDSHL--CLDGYSIEERTISRWSPELCRE
         VN N  G D +L  CL+ +++EE+TISRWSPEL RE
Subjt:  TVNYNGSGSDSHL--CLDGYSIEERTISRWSPELCRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCAAGATGGAAGGGAAAAGGTTCAGAAGCCAAAGCACTTGCAGATCCAATGTCGAAGATTATACTTGAGCTTCAATCTTCTCTAACACAATCAAACGCTCAAGG
ATTACTATCAAGTTCAAGCGTACTTTATCAAGCAAATGAAGAACAAGAAGCCCAACTTCTTAATCGCGCTTGTTTCGGTCGACCAATTCTCTCCTCCGACAAGGATAAGC
AATGGTTTCAATTGGGCATGGAAGAGGCGTTTTACTTATCCCATCATTTGAATTGCTTCAAAATCGTCGATGGGCAGAATTGTGAAAAGAATTTCCAACAACTCTGGCTG
TATTTGAAATCCCTAAACCCTAGATTCCCCGAGTTTTACGCGGCTTATCGAAATCTTCGTGTGAAGAATTGGGTTGTGAGACCTGGATCTCAATATGGGGTTGATTTCGT
GGCGTATCGTCACCATCCAGCTCTCGTTCACTCTGAATTTGCGGTGCTTGTGTTGTTGGAGGGTGAAGGCAGTAATGACAATGGGCGATTGAGAGTTTGGTCTGATTTTC
TTTGCACGATTCGGCTTTGTGGAAGCGTTGCGAAAACGCTGCTGCTTCTTACTGTCAATTACAATGGAAGTGGTTCTGATTCTCATTTGTGTTTGGATGGTTACTCCATT
GAAGAGCGCACGATTTCGCGATGGAGTCCGGAACTGTGCCGCGAAAGTCCTGCTAAAGTGTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTCTCGTTTCTTGTCCGTCCAGATTTGAAAGGCGAACATTTGAACCCTAATTTCACTGTTTCTACTCTTTCAGGCCGCCATTAATGGCGCCAAGATGGAAGGGAA
AAGGTTCAGAAGCCAAAGCACTTGCAGATCCAATGTCGAAGATTATACTTGAGCTTCAATCTTCTCTAACACAATCAAACGCTCAAGGATTACTATCAAGTTCAAGCGTA
CTTTATCAAGCAAATGAAGAACAAGAAGCCCAACTTCTTAATCGCGCTTGTTTCGGTCGACCAATTCTCTCCTCCGACAAGGATAAGCAATGGTTTCAATTGGGCATGGA
AGAGGCGTTTTACTTATCCCATCATTTGAATTGCTTCAAAATCGTCGATGGGCAGAATTGTGAAAAGAATTTCCAACAACTCTGGCTGTATTTGAAATCCCTAAACCCTA
GATTCCCCGAGTTTTACGCGGCTTATCGAAATCTTCGTGTGAAGAATTGGGTTGTGAGACCTGGATCTCAATATGGGGTTGATTTCGTGGCGTATCGTCACCATCCAGCT
CTCGTTCACTCTGAATTTGCGGTGCTTGTGTTGTTGGAGGGTGAAGGCAGTAATGACAATGGGCGATTGAGAGTTTGGTCTGATTTTCTTTGCACGATTCGGCTTTGTGG
AAGCGTTGCGAAAACGCTGCTGCTTCTTACTGTCAATTACAATGGAAGTGGTTCTGATTCTCATTTGTGTTTGGATGGTTACTCCATTGAAGAGCGCACGATTTCGCGAT
GGAGTCCGGAACTGTGCCGCGAAAGTCCTGCTAAAGTGTGAAGTATGCCATCCCCAACAGAAATGTCATAAACAAACAATAGAATGATTAAGGCTACGTTGCTTGTCAGA
GACATGTTCATCCAGCTCTTCTTGAATGCAAGAGTTGTTGAAGATTGCTCCACTTTCGATTAGTCAAGATAAGCTTTTACAAGATGAAGAATTATGTAGGGAAACGGAAT
CCATGAAGTTTGAAAAAGGAAGTAGATGGTGCAAGATAGGAGGCAGATCTCTAGTTTAACATTTCAATTGCTGGAACAACAGGCACCATTCAACAATGATGTTTTATGTT
TTAATGGAGGCTATTCGAGCTATGCTAAGAACATGCGAGAAACGACTGGACTTGAATGATCTTCTTCATTGTTACATTATTGATGCTAATTTTTTTATCTTTCTTGGCTA
CTTGAATGAAGCACAGAGTACTGGTTTTATATCTATTTTTATCAGGCGAGATGTTATTTTATCTTCAAGAATATGGTTTTTGTATGGGA
Protein sequenceShow/hide protein sequence
MAPRWKGKGSEAKALADPMSKIILELQSSLTQSNAQGLLSSSSVLYQANEEQEAQLLNRACFGRPILSSDKDKQWFQLGMEEAFYLSHHLNCFKIVDGQNCEKNFQQLWL
YLKSLNPRFPEFYAAYRNLRVKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLLEGEGSNDNGRLRVWSDFLCTIRLCGSVAKTLLLLTVNYNGSGSDSHLCLDGYSI
EERTISRWSPELCRESPAKV