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Sed0001381 (gene) of Chayote v1 genome

Gene IDSed0001381
OrganismSechium edule (Chayote v1)
Descriptionthionin-like protein 2
Genome locationLG09:39048046..39049489
RNA-Seq ExpressionSed0001381
SyntenySed0001381
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]5.2e-4581.48Show/hide
Query:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN
        MKS++V+CFILSL AG+STASFGKCYAKCF+VCAITPG+ + TCG KCLADCLF AS+P D+NH LDTHYFCKLGCATSLCTKFST  DPAEKKVESCVN
Subjt:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN

Query:  SCSQTCMK
        SCS+TC+K
Subjt:  SCSQTCMK

KAG7014098.1 Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]6.6e-4073.15Show/hide
Query:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN
        MKS++++CFILSL AG+STASF KCYAKCF+ CAITPGI+L TCGA CLA CLF AS+P+D NH ++THYFCKLGCATS+CTKFST  DP+EKKVE CV+
Subjt:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN

Query:  SCSQTCMK
        SC+ TC+K
Subjt:  SCSQTCMK

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4581.48Show/hide
Query:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN
        MKS++V+CFILSL AG+STASFGKCYAKCF+VCAITPG+ + TCG KCLADCLF AS+P D+NH LDTHYFCKLGCATSLCTKFST  DPAEKKVESCVN
Subjt:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN

Query:  SCSQTCMK
        SCS+TC+K
Subjt:  SCSQTCMK

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]8.9e-4581.48Show/hide
Query:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN
        MKS++V+CFILSL AG+STASFGKCYAKCF+VCAITPG+ + TCG KCLADCLF AS+P D+NH LDTHYFCKLGCATSLCTKFST  DPAEKKVESCVN
Subjt:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN

Query:  SCSQTCMK
        SCS+TC+K
Subjt:  SCSQTCMK

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]1.8e-4584.26Show/hide
Query:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN
        MKS+I++CFI+SL  G+STASFGKCYAKCFVVCAITPGI + TCGAKCL DCLF ASSPLD NH LDTHYFCKLGCATSLCTKFST KDPAEKKVESCVN
Subjt:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN

Query:  SCSQTCMK
        SC QTC+K
Subjt:  SCSQTCMK

TrEMBL top hitse value%identityAlignment
A0A0A0KC18 Uncharacterized protein6.3e-3672.82Show/hide
Query:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN
        MKS++++CFILSL AG+STASFGKCYAKCF+VCAITPGI + TCGAKCLADCLF ASSP+D+N+ +DTHYFCKLGCATS CTKFST KDP +K   + V 
Subjt:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN

Query:  SCS
        + S
Subjt:  SCS

A0A2H5Q5I4 Uncharacterized protein3.8e-2558.88Show/hide
Query:  SLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSC
        SL++VC +L L  G+STASF  CY  CF+ C I  G +L  C AKCL DC+  ASS L+ N   D   FCKLGCA+SLCT  ST +DPAE+KVESCVNSC
Subjt:  SLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSC

Query:  SQTCMKV
        S+TC K+
Subjt:  SQTCMKV

A0A6J1DDL8 thionin-like protein 24.3e-3776.19Show/hide
Query:  LIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFN-ASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSC
        LI+V  +LSL AGKSTASFGKCYAKCFVVCAITPGI + TC AKCL DCLF  AS+  D N  +DT YFCKLGCATSLCTKFST KDPAEKKV SCV+SC
Subjt:  LIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFN-ASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSC

Query:  SQTCM
        SQ C+
Subjt:  SQTCM

A0A6J1KDK0 thionin-like protein 24.3e-4581.48Show/hide
Query:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN
        MKS++V+CFILSL AG+STASFGKCYAKCF+VCAITPG+ + TCG KCLADCLF AS+P D+NH LDTHYFCKLGCATSLCTKFST  DPAEKKVESCVN
Subjt:  MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVN

Query:  SCSQTCMK
        SCS+TC+K
Subjt:  SCSQTCMK

V4ULM8 Uncharacterized protein3.8e-2558.88Show/hide
Query:  SLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSC
        SL++VC +L L  G+STASF  CY  CF+ C I  G +L  C AKCL DC+  ASS L+ N   D   FCKLGCA+SLCT  ST +DPAE+KVESCVNSC
Subjt:  SLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSC

Query:  SQTCMKV
        S+TC K+
Subjt:  SQTCMKV

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 22.2e-0935.45Show/hide
Query:  SLIVVCFILSLFAGKSTAS--FGKCYAKCFVVC-AITPGISLRTCGAKCLADCLFNASSPLDVNHNLD-THYFCKLGCATSLCTKFSTNKDPAEKKVESC
        ++++V  I +L A  +     F +CY  C V C A +       C   C  +CL   S P   ++N+D + YFCKLGCAT  C   S+ ++P  ++V +C
Subjt:  SLIVVCFILSLFAGKSTAS--FGKCYAKCFVVC-AITPGISLRTCGAKCLADCLFNASSPLDVNHNLD-THYFCKLGCATSLCTKFSTNKDPAEKKVESC

Query:  VNSCSQTCMK
        V+SCS  C K
Subjt:  VNSCSQTCMK

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.1.5e-1035.45Show/hide
Query:  SLIVVCFILSLFAGKSTAS--FGKCYAKCFVVC-AITPGISLRTCGAKCLADCLFNASSPLDVNHNLD-THYFCKLGCATSLCTKFSTNKDPAEKKVESC
        ++++V  I +L A  +     F +CY  C V C A +       C   C  +CL   S P   ++N+D + YFCKLGCAT  C   S+ ++P  ++V +C
Subjt:  SLIVVCFILSLFAGKSTAS--FGKCYAKCFVVC-AITPGISLRTCGAKCLADCLFNASSPLDVNHNLD-THYFCKLGCATSLCTKFSTNKDPAEKKVESC

Query:  VNSCSQTCMK
        V+SCS  C K
Subjt:  VNSCSQTCMK

AT1G12672.1 unknown protein5.1e-0645.65Show/hide
Query:  DVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSCSQTC
        ++NHN    Y+CKLGC+T  C   S+ ++P   KV  CV+SCS  C
Subjt:  DVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSCSQTC

AT1G12672.2 unknown protein1.6e-0742.86Show/hide
Query:  CLADCLFNASSPLD----VNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSCSQTC
        C+  CL   SS +D    +NHN    Y+CKLGC+T  C   S+ ++P   KV  CV+SCS  C
Subjt:  CLADCLFNASSPLD----VNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSCSQTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTCTTATTGTGGTTTGCTTCATTCTAAGCTTATTTGCAGGCAAATCCACAGCTTCATTTGGAAAGTGCTATGCAAAATGCTTTGTTGTTTGTGCCATCACACC
TGGCATCTCCCTCCGCACGTGCGGGGCTAAGTGCTTGGCTGATTGCCTTTTCAATGCTTCTTCTCCTCTGGATGTCAACCATAATTTGGACACTCATTATTTTTGCAAAT
TGGGCTGTGCCACTTCTCTTTGCACCAAATTTAGCACCAACAAAGACCCAGCTGAGAAGAAAGTTGAAAGCTGTGTGAATTCGTGCTCTCAAACATGCATGAAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTCTTATTGTGGTTTGCTTCATTCTAAGCTTATTTGCAGGCAAATCCACAGCTTCATTTGGAAAGTGCTATGCAAAATGCTTTGTTGTTTGTGCCATCACACC
TGGCATCTCCCTCCGCACGTGCGGGGCTAAGTGCTTGGCTGATTGCCTTTTCAATGCTTCTTCTCCTCTGGATGTCAACCATAATTTGGACACTCATTATTTTTGCAAAT
TGGGCTGTGCCACTTCTCTTTGCACCAAATTTAGCACCAACAAAGACCCAGCTGAGAAGAAAGTTGAAAGCTGTGTGAATTCGTGCTCTCAAACATGCATGAAGGTTTAG
TAATCAGAAAAAAACGACCAGAAAATACGAGCAGCTGAGATTGGCTTTTAAGATACTATGATTAAATAAATGTCAATGGTGAGAAAAAAAACATTTGGCTAAAACCTTAT
CCCATATTTAATTTGAGCTTGTTTTTCTTTTATATTTCTGCTTGTACTCACCAACTTGTAAAAATCATGGTTTGCTTTGCTATGTTGTGGTAATGAGAATGGTGTGTCCT
ATCTA
Protein sequenceShow/hide protein sequence
MKSLIVVCFILSLFAGKSTASFGKCYAKCFVVCAITPGISLRTCGAKCLADCLFNASSPLDVNHNLDTHYFCKLGCATSLCTKFSTNKDPAEKKVESCVNSCSQTCMKV