; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001383 (gene) of Chayote v1 genome

Gene IDSed0001383
OrganismSechium edule (Chayote v1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Genome locationLG08:21374533..21375355
RNA-Seq ExpressionSed0001383
SyntenySed0001383
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588215.1 hypothetical protein SDJN03_16780, partial [Cucurbita argyrosperma subsp. sororia]1.9e-8879.33Show/hide
Query:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL
        MGNS SPCLHAISTT+ RRSSAV LIF N +T++LTGNHHIAGEIMFQFP M++CHADSFFIGHP+PSL+I D+LL+GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL

Query:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG
         +IGAG A FSGQ PFEYIRGTNG+++IK+VPEF+VRLIS      GEGS  GG+FLCSTPEL+KHYDQLVGS+KGQVW PKLE+ISEYKIRYSPC+ VG
Subjt:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG

Query:  FKVKQKEG
        FKVKQKEG
Subjt:  FKVKQKEG

KAG7022114.1 hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-8977.88Show/hide
Query:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL
        MGNS SPCLHAISTT R RSSAV LIF N +T++LTGNHHIAGEIMFQFP M++CHADSFFIGHP+PSL+I D+LL+GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL

Query:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG
         +IGA  A FSGQ PFEYIRGTNG+++IK+VPEF+VRLIS    +GG     GG+FLCSTPEL+KHYDQLVGS+KGQVW PKLE+ISEYKIRYSPC+ VG
Subjt:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG

Query:  FKVKQKEG
        FKVKQKEG
Subjt:  FKVKQKEG

XP_022927424.1 uncharacterized protein LOC111434251 [Cucurbita moschata]4.6e-9078.37Show/hide
Query:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL
        MGNS SPCLHAISTT+RR SSAV LIF N +T++LTGNHHIAGEIMFQFP M++CHADSFFIGHP+PSL+I D+LL+GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL

Query:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG
         +IGAG A FSGQ PFEYIRGTNG+++IK+VPEF+VRLIS    +GG     GG+FLCSTPEL+KHYDQLVGS+KGQVW PKLE+ISEYKIRYSPC+ VG
Subjt:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG

Query:  FKVKQKEG
        FKVKQKEG
Subjt:  FKVKQKEG

XP_023530355.1 uncharacterized protein LOC111792953 [Cucurbita pepo subsp. pepo]3.0e-8977.88Show/hide
Query:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL
        MGNS SPCLHAISTT RRRSSAV LIF N +T++LTGNHHIAGEIMFQFP M++CHADSFFIGHP+PSL+I D+L++GETYFV+PID FASFDVLSTSSL
Subjt:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL

Query:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG
         +IGAG A FSGQ PFEYIRGTNG+++IK+VPEF+VRLIS        G S GG+FLCSTPEL+KHYDQLVGS+KGQVW PKLE+ISEYKIRYSPC+ VG
Subjt:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG

Query:  FKVKQKEG
        FKVKQKEG
Subjt:  FKVKQKEG

XP_038880154.1 uncharacterized protein LOC120071833 [Benincasa hispida]5.2e-8675.83Show/hide
Query:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL
        MGN+ SPC  +IS + RRR+SAVKLIF N  TQ L GNHH+AGEIMFQFP M+VCHA+SFFIGHP+PSL+I+D+LL GETY VLPID+FAS DVLSTSSL
Subjt:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL

Query:  VAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCR
          I AG A+   FSG CPFEY+RGTNG+VLIKV+PEFIVRLIS+   DGG G   GG FLCSTPELKKHYDQLVG+SKGQVW PKLETISEYKIRYSPCR
Subjt:  VAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCR

Query:  LVGFKVKQKEG
         VGFK+KQKEG
Subjt:  LVGFKVKQKEG

TrEMBL top hitse value%identityAlignment
A0A0A0LZV5 Uncharacterized protein1.2e-8373.58Show/hide
Query:  MGNSFSPCLHAIS-TTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSS
        MGN+ SPCL +IS +   RR S VKL+F N  T+ L G+HH AGEIMFQFP M+VCHA+SFFIGHP+PSLSI D+L++GETY +LPID+FAS DVLSTSS
Subjt:  MGNSFSPCLHAIS-TTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSS

Query:  LVAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPC
        L  IGAG  +   FSG CPFEY+RGTNGKVLIKV+PEFIVRLIS+   DGGE    GG FLCSTPELKKHYDQLVGS+KGQVW PKLETISEYKIRYSPC
Subjt:  LVAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPC

Query:  RLVGFKVKQKEG
        R VGFK+KQKEG
Subjt:  RLVGFKVKQKEG

A0A1S3BP11 uncharacterized protein LOC1034919836.9e-8475Show/hide
Query:  MGNSFSPCLHAISTTTRR-RSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSS
        MGN+ SPCL +IS + RR R SAVKL+F +  T+ L GNHH AGEIMFQFP M+VCHA+SFFIGHP+PSLSI D LL GETY VLPID+FAS DVLSTSS
Subjt:  MGNSFSPCLHAISTTTRR-RSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSS

Query:  LVAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPC
        L  IGAG  +   FSG CPFEY+RGTNG+VLIKV+PEFIVRLIS    DGGE    GG FLCSTPELKKHYDQLVGS+KGQVW PKLETISEYKIRYSPC
Subjt:  LVAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPC

Query:  RLVGFKVKQKEG
        R VGFK+KQKEG
Subjt:  RLVGFKVKQKEG

A0A5A7UN34 DUF4228 domain protein6.9e-8475Show/hide
Query:  MGNSFSPCLHAISTTTRR-RSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSS
        MGN+ SPCL +IS + RR R SAVKL+F +  T+ L GNHH AGEIMFQFP M+VCHA+SFFIGHP+PSLSI D LL GETY VLPID+FAS DVLSTSS
Subjt:  MGNSFSPCLHAISTTTRR-RSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSS

Query:  LVAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPC
        L  IGAG  +   FSG CPFEY+RGTNG+VLIKV+PEFIVRLIS    DGGE    GG FLCSTPELKKHYDQLVGS+KGQVW PKLETISEYKIRYSPC
Subjt:  LVAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPC

Query:  RLVGFKVKQKEG
        R VGFK+KQKEG
Subjt:  RLVGFKVKQKEG

A0A6J1EHY7 uncharacterized protein LOC1114342512.2e-9078.37Show/hide
Query:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL
        MGNS SPCLHAISTT+RR SSAV LIF N +T++LTGNHHIAGEIMFQFP M++CHADSFFIGHP+PSL+I D+LL+GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL

Query:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG
         +IGAG A FSGQ PFEYIRGTNG+++IK+VPEF+VRLIS    +GG     GG+FLCSTPEL+KHYDQLVGS+KGQVW PKLE+ISEYKIRYSPC+ VG
Subjt:  VAIGAGTATFSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG

Query:  FKVKQKEG
        FKVKQKEG
Subjt:  FKVKQKEG

A0A6J1HB88 uncharacterized protein LOC1114617447.9e-8072.51Show/hide
Query:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL
        MGN+ SPCL   S T R RSSAVKLIF +  T+ L G+HH AGEIMFQFP M+VCHADSFFIGH +PSL+I D+LL+GETY VLPID+F+  DVLSTSSL
Subjt:  MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSL

Query:  VAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCR
         AIGAG      FS  CPFEY+RG NGK LIKV+PEFIVRL+S     GG    EGG FLCSTPELKKHYDQLVG+SKGQVW P LETISEYKIRYSPCR
Subjt:  VAIGAGTAT---FSGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCR

Query:  LVGFKVKQKEG
         VGFKVKQKEG
Subjt:  LVGFKVKQKEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28190.1 unknown protein5.7e-1433.74Show/hide
Query:  IAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQF---ASFDVLSTSSLVAIGAGTATFSGQCPFEYI--RGTNGKVL-IKVVPEF
        +  E+   FP   +C +D  +IG   P LS  + L  G  YF+LP D F    SF  ++T      G      + Q P  ++  +G  G+ L I+V  EF
Subjt:  IAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQF---ASFDVLSTSSLVAIGAGTATFSGQCPFEYI--RGTNGKVL-IKVVPEF

Query:  IVRLISK-------PMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYK
        +  L+ +         ++  EG  EG   +C+T +LKK Y QLVG  +   W PKLETI+E K
Subjt:  IVRLISK-------PMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYK

AT5G12340.1 unknown protein2.6e-4346.86Show/hide
Query:  RRRSSAVKLIFPNNL-TQTLTG-NHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSLVAIGAGTATF----
        RRR   V L+F  ++ T+TL G   H+AGEIMF+FP  +VCHADSF+IG  +P+L++ D L+ G+TYFVLPI++F  + +L+TS L    +         
Subjt:  RRRSSAVKLIFPNNL-TQTLTG-NHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSLVAIGAGTATF----

Query:  --------SGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGG--SFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG
                S   PFEY +G NGK+LIKV PEFI+ LI K  +   E ++  G  S +C++PELKK YDQLVG ++  +W P L+TISE+KIR SP R  G
Subjt:  --------SGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGG--SFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVG

Query:  FKVKQKE
           KQ E
Subjt:  FKVKQKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTCATTCTCTCCATGCCTTCATGCCATTTCCACCACCACCCGCCGCCGCTCCTCCGCCGTCAAACTCATCTTCCCCAACAACCTCACCCAAACCCTCACCGG
CAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCCCACATGGTGGTCTGCCACGCCGACTCCTTCTTCATCGGCCACCCGCTCCCCTCCTTGTCCATCCACGACC
GCCTCCTCTCGGGCGAGACCTACTTTGTTCTCCCGATCGATCAGTTCGCCTCCTTCGACGTTCTCTCTACGTCGTCCCTCGTAGCCATCGGGGCTGGAACTGCAACATTC
TCCGGCCAGTGTCCGTTCGAGTACATTCGAGGCACGAATGGGAAGGTCCTGATTAAGGTTGTGCCGGAGTTTATTGTTCGGCTTATTTCTAAACCGATGGATGACGGTGG
AGAAGGCAGCAGCGAAGGAGGTAGTTTTTTATGTAGTACGCCGGAGTTGAAGAAGCATTACGATCAACTTGTGGGATCATCAAAAGGGCAAGTTTGGTTGCCGAAATTGG
AGACCATTTCGGAGTATAAAATTAGGTATTCGCCTTGTAGACTTGTAGGGTTTAAAGTTAAACAAAAAGAAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATCATCATCTTCCATCCTAATCCTAATTTCATAATTCAACAATGGGAAATTCATTCTCTCCATGCCTTCATGCCATTTCCACCACCACCCGCCGCCGCTCCTCCGCCGTC
AAACTCATCTTCCCCAACAACCTCACCCAAACCCTCACCGGCAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCCCACATGGTGGTCTGCCACGCCGACTCCTT
CTTCATCGGCCACCCGCTCCCCTCCTTGTCCATCCACGACCGCCTCCTCTCGGGCGAGACCTACTTTGTTCTCCCGATCGATCAGTTCGCCTCCTTCGACGTTCTCTCTA
CGTCGTCCCTCGTAGCCATCGGGGCTGGAACTGCAACATTCTCCGGCCAGTGTCCGTTCGAGTACATTCGAGGCACGAATGGGAAGGTCCTGATTAAGGTTGTGCCGGAG
TTTATTGTTCGGCTTATTTCTAAACCGATGGATGACGGTGGAGAAGGCAGCAGCGAAGGAGGTAGTTTTTTATGTAGTACGCCGGAGTTGAAGAAGCATTACGATCAACT
TGTGGGATCATCAAAAGGGCAAGTTTGGTTGCCGAAATTGGAGACCATTTCGGAGTATAAAATTAGGTATTCGCCTTGTAGACTTGTAGGGTTTAAAGTTAAACAAAAAG
AAGGTTAATTAACTTTATTTTGTTCTCTTTTTATAGAAGCTTCCAAAGTTAGCTATTCTTTATGATTTTGTTGAATGTAAATTCAAAAATATATGGTTGCTCATTTTTAA
TGGCGAGTGATCACTTAATTATGTAACATCTATTTATAGAATATGCAGTGAGG
Protein sequenceShow/hide protein sequence
MGNSFSPCLHAISTTTRRRSSAVKLIFPNNLTQTLTGNHHIAGEIMFQFPHMVVCHADSFFIGHPLPSLSIHDRLLSGETYFVLPIDQFASFDVLSTSSLVAIGAGTATF
SGQCPFEYIRGTNGKVLIKVVPEFIVRLISKPMDDGGEGSSEGGSFLCSTPELKKHYDQLVGSSKGQVWLPKLETISEYKIRYSPCRLVGFKVKQKEG