; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001423 (gene) of Chayote v1 genome

Gene IDSed0001423
OrganismSechium edule (Chayote v1)
DescriptionATP-dependent DNA helicase At3g02060, chloroplastic
Genome locationLG03:5988056..6000025
RNA-Seq ExpressionSed0001423
SyntenySed0001423
Gene Ontology termsGO:0000967 - rRNA 5'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0071035 - nuclear polyadenylation-dependent rRNA catabolic process (biological process)
GO:0060149 - negative regulation of posttranscriptional gene silencing (biological process)
GO:0010587 - miRNA catabolic process (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0006281 - DNA repair (biological process)
GO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0004534 - 5'-3' exoribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR003711 - CarD-like/TRCF domain
IPR011545 - DEAD/DEAH box helicase domain
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036101 - CarD-like/TRCF domain superfamily
IPR037235 - TRCF-like, C-terminal D7 domai


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150202.1 ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis sativus]0.0e+0093.07Show/hide
Query:  LLSPAPDVSSSRPLAAFRHGSFPRL--WGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD
        LLSPAPDVSSS P+  F+  SFP L  WGLFNRN TFRH P RCVSI+NVVYAEDV+VPGTAKS+RRR+QIEL+ DSIS+LNERI RFHG+R+  +TAMD
Subjt:  LLSPAPDVSSSRPLAAFRHGSFPRL--WGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKGDRQ+KESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEA+EYVF+EYADGMAKLP+KQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY

Query:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        +LPNENKRPR LSKLNDTTTWEKRKTKGK+AIQKMVVDLMELYLHRLKQRR PYPKCS+ME+F+AQFPYEPTVDQKEAF DVEKDLT RETPMDRLICGD
Subjt:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAI CVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPD+QIGLLSRFQTK EKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
Subjt:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE
        LEASFPD EIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLS++ALE
Subjt:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE

Query:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
        RLAALEECR+LGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE

Query:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        +AA+ DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMET MNKKVF+LISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
Subjt:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIK
        EQLLNWIFECLVELHAS PALIK
Subjt:  EQLLNWIFECLVELHASLPALIK

XP_008465367.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis melo]0.0e+0092.83Show/hide
Query:  LLSPAPDVSSSRPLAAFRHGSFPRL--WGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD
        L SPAPDVSSSRPL AF+  SFP L  WGLFNRNCTFRH P RCVS++NV YAEDV+VPGTAKSARRR+QIEL+ DSISVLNERI RFHG+R+  +T MD
Subjt:  LLSPAPDVSSSRPLAAFRHGSFPRL--WGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKGD+Q+KESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTE  EYVF+EYADGMAKLP+KQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY

Query:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNEN++PR LSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRR PYPKCS+ME+F+AQFPYEPTVDQKEAF DVE+DLTERETPMDRLICGD
Subjt:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAI CVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPD+QIGLLSRFQTK EKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
Subjt:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE
        LEASFPD EIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLS+EALE
Subjt:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE

Query:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
        RLAALE+CR+LGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE

Query:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        +AA+ DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
Subjt:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIK
        EQLLNW+FECLVELHASLPALIK
Subjt:  EQLLNWIFECLVELHASLPALIK

XP_022141422.1 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Momordica charantia]0.0e+0093.2Show/hide
Query:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD
        MALLSPAPDVS+ RPL AFR GSFPR W LFNRNCT R  P+RC+S++NVVYAEDVMVPGTAKSARRREQIEL+ DSIS+LNER+RR+HG+RE  +TAMD
Subjt:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY
        AEEADRYIQMVKEQQQRGLQKLKGDRQ+ ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE +EYVF+EYADGMAKLP+KQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY

Query:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNE KRPR LSKLNDT+TWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCS+MEDF AQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
Subjt:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAI CVVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPD+QIGLLSRFQTK EKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE
        LEASFPD EIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLS++ALE
Subjt:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE

Query:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
        RLAALEECR+LGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE

Query:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        KAA+ DIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMN+KVF+LI+DSMTSEVH+NCLSFEEH IKAGLLLELP+
Subjt:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIK
        EQLLNWIFECLVELHASLPALIK
Subjt:  EQLLNWIFECLVELHASLPALIK

XP_022957218.1 ATP-dependent DNA helicase At3g02060, chloroplastic [Cucurbita moschata]0.0e+0092.35Show/hide
Query:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD
        MALL P  DVSSSRPL AFR GSFP+LWGLFNRNC  RH  +RCVSI+NVVYAEDVMVPG AKSARRREQIEL++DSI+VLNERIRRFH +RE  KTAMD
Subjt:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY
        AEEADRYIQMVKEQQQRGLQKLKG+RQKKESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE  EYVF+EYADGMAKL +KQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY

Query:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        +LPNENKRPR LSKLNDTTTWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRPPYPKCS+ME+F AQF Y PTVDQKEAF DVEKDLTERETPMDRLICGD
Subjt:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAI  VVSAGKQAMVLAPTIVLAKQHFEVIT RFSSFPD+QIGLLSRFQTK+EK+KHLEMIKEGQLNI+VGTHSLLGDRVVYSNLGLLVV
Subjt:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKV SAIKYELERGGQVFYV PRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE
        LEASFPD EI LAHGKQYSKQLEETMENFALG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLS++ALE
Subjt:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE

Query:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
        RLAALEECR+LGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE

Query:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        KAA+ DIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETKMNKKVF+LIS+SM SEVHRNCL+FEEHQIKAGLLLELPR
Subjt:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIK
        EQLLNWIFECLVELHASLPALIK
Subjt:  EQLLNWIFECLVELHASLPALIK

XP_038907244.1 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Benincasa hispida]0.0e+0093.2Show/hide
Query:  MALL-SPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAM
        MALL SPAPDVSSSRPL AF+ GSFP L GLFNRN TFRH P+R VSI+NV+YAEDV+VPG AKSARRREQIEL+ DSIS+LNERIRRFHG+RE  +T M
Subjt:  MALL-SPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAM

Query:  DAEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYR
        D+EEADRYIQMVKEQQQRGLQKLKGDRQ+K+SDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE +EYVF+EYADGMAKLP+KQASRMLYR
Subjt:  DAEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYR

Query:  YNLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICG
        YNLPNENKRPR LSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRR PYPKCS+ME+F+AQFPYEPTVDQKEAF DVE+DLT+RETPMDRLICG
Subjt:  YNLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICG

Query:  DVGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV
        DVGFGKTEVALRAI CVVSAGKQAMVLAPTIVLAKQHFEVITQRFS FPD+QIGLLSRFQTK EKEKHLEMIKEGQLNIIVGTHSLLGDRVVYS LGLLV
Subjt:  DVGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV

Query:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD
        VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAI+YELERGGQVFYVLPRIKGLEEVK+
Subjt:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKD

Query:  FLEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEAL
        FLEASFPD EIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLS EAL
Subjt:  FLEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEAL

Query:  ERLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGA
        ERLAALEECR+LGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKI+NGA
Subjt:  ERLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGA

Query:  EKAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELP
        E AA+ DIWTLMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MNKKVF+LISDSMTSEVHRNCLSFEEHQIKAGLLLELP
Subjt:  EKAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELP

Query:  REQLLNWIFECLVELHASLPALIK
        REQLLNWIFECLVELHASLPALIK
Subjt:  REQLLNWIFECLVELHASLPALIK

TrEMBL top hitse value%identityAlignment
A0A1S3CNQ6 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0092.83Show/hide
Query:  LLSPAPDVSSSRPLAAFRHGSFPRL--WGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD
        L SPAPDVSSSRPL AF+  SFP L  WGLFNRNCTFRH P RCVS++NV YAEDV+VPGTAKSARRR+QIEL+ DSISVLNERI RFHG+R+  +T MD
Subjt:  LLSPAPDVSSSRPLAAFRHGSFPRL--WGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKGD+Q+KESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTE  EYVF+EYADGMAKLP+KQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY

Query:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNEN++PR LSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRR PYPKCS+ME+F+AQFPYEPTVDQKEAF DVE+DLTERETPMDRLICGD
Subjt:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAI CVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPD+QIGLLSRFQTK EKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
Subjt:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE
        LEASFPD EIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLS+EALE
Subjt:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE

Query:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
        RLAALE+CR+LGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE

Query:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        +AA+ DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
Subjt:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIK
        EQLLNW+FECLVELHASLPALIK
Subjt:  EQLLNWIFECLVELHASLPALIK

A0A5A7VIC8 ATP-dependent DNA helicase0.0e+0092.81Show/hide
Query:  LLSPAPDVSSSRPLAAFRHGSFPRL--WGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD
        L SPAPDVSSSRPL AF+  SFP L  WGLFNRNCTFRH P RCVS++NV YAEDV+VPGTAKSARRR+QIEL+ DSISVLNERI RFHG+R+  +T MD
Subjt:  LLSPAPDVSSSRPLAAFRHGSFPRL--WGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY
        +EEADRYIQMVKEQQQRGLQKLKGD+Q+KESDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTE  EYVF+EYADGMAKLP+KQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY

Query:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNENK+PR LSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRR PYPKCS+ME+F+AQFPYEPTVDQKEAF DVE+DLTERETPMDRLICGD
Subjt:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAI CVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPD+QIGLLSRFQTK EKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
Subjt:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQ+FYVLPRIKGLEEVK+F
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE
        LEASFPD EIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKSLLS+EALE
Subjt:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE

Query:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
        RLAALEECR+LGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKI+NGAE
Subjt:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE

Query:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAG
        +AA+ DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MNKKVFQLISDSMTSEVHRNCLSFEEHQIK G
Subjt:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAG

A0A6J1CJT5 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X10.0e+0093.2Show/hide
Query:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD
        MALLSPAPDVS+ RPL AFR GSFPR W LFNRNCT R  P+RC+S++NVVYAEDVMVPGTAKSARRREQIEL+ DSIS+LNER+RR+HG+RE  +TAMD
Subjt:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY
        AEEADRYIQMVKEQQQRGLQKLKGDRQ+ ESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE +EYVF+EYADGMAKLP+KQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY

Query:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        NLPNE KRPR LSKLNDT+TWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCS+MEDF AQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
Subjt:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAI CVVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPD+QIGLLSRFQTK EKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLVV
Subjt:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE
        LEASFPD EIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLS++ALE
Subjt:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE

Query:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
        RLAALEECR+LGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE

Query:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        KAA+ DIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMN+KVF+LI+DSMTSEVH+NCLSFEEH IKAGLLLELP+
Subjt:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIK
        EQLLNWIFECLVELHASLPALIK
Subjt:  EQLLNWIFECLVELHASLPALIK

A0A6J1GZL7 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0092.35Show/hide
Query:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD
        MALL P  DVSSSRPL AFR GSFP+LWGLFNRNC  RH  +RCVSI+NVVYAEDVMVPG AKSARRREQIEL++DSI+VLNERIRRFH +RE  KTAMD
Subjt:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY
        AEEADRYIQMVKEQQQRGLQKLKG+RQKKESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE  EYVF+EYADGMAKL +KQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY

Query:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        +LPNENKRPR LSKLNDTTTWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRPPYPKCS+ME+F AQF Y PTVDQKEAF DVEKDLTERETPMDRLICGD
Subjt:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAI  VVSAGKQAMVLAPTIVLAKQHFEVIT RFSSFPD+QIGLLSRFQTK+EK+KHLEMIKEGQLNI+VGTHSLLGDRVVYSNLGLLVV
Subjt:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKV SAIKYELERGGQVFYV PRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE
        LEASFPD EI LAHGKQYSKQLEETMENFALG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLS++ALE
Subjt:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE

Query:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
        RLAALEECR+LGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE

Query:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        KAA+ DIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETKMNKKVF+LIS+SM SEVHRNCL+FEEHQIKAGLLLELPR
Subjt:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIK
        EQLLNWIFECLVELHASLPALIK
Subjt:  EQLLNWIFECLVELHASLPALIK

A0A6J1JT22 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0092.1Show/hide
Query:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD
        MALL P  DVSSSRPL AFR GSFP+LWGLFNRNC  RH  +R VSI+NVVYAEDVMV GTAKSARRREQIEL+ DSI+VLNERIRRFH +RE  KTAMD
Subjt:  MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMD

Query:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY
        A EADRYIQMVKEQQQRGLQKLKG+R+KKESDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE  EYVF+EYADGMAKL +KQASRMLYRY
Subjt:  AEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRY

Query:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD
        +LPNENKRPR LSKLNDTTTWEKRKTKGK+AIQKMVVDLMELYLHRLKQRRPPYPKCS+ME+F AQF Y PTVDQKEAF DVEKDLTERETPMDRLICGD
Subjt:  NLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGD

Query:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV
        VGFGKTEVALRAI  VVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPD+QIGLLSRFQTK+EK+KHLEMIKEGQLNI+VGTHSLLGDRVVYSNLGLLVV
Subjt:  VGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVV

Query:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF
        DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLS+FSKEKVKSAIKYELERGGQVFYV PRIKGLEEVKDF
Subjt:  DEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDF

Query:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE
        LEASFPD EI LAHGKQYSKQLEETMENF+LG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LLS++ALE
Subjt:  LEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALE

Query:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
        RLAALEECR+LGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE
Subjt:  RLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAE

Query:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR
        KAA+ DIW LMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI RIYASGKTVCMETKMNKKVF+LIS+SM SEVHRNCL+FEEHQIKAGLLLELPR
Subjt:  KAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPR

Query:  EQLLNWIFECLVELHASLPALIK
        EQLLNWIFECLVELHASLPALIK
Subjt:  EQLLNWIFECLVELHASLPALIK

SwissProt top hitse value%identityAlignment
F4JFJ3 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0078.88Show/hide
Query:  SFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIEL-QNDSISVLNERIRRFHGRREVLKTAMDAEEADRYIQMVKEQQQRGLQK
        SFP    LF  +   R   R+  S+  +V A   +    AK  R RE+ EL ++DSIS+LNERIRR  G+RE  + AMD+EEA++YI MVKEQQ+RGLQK
Subjt:  SFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIEL-QNDSISVLNERIRRFHGRREVLKTAMDAEEADRYIQMVKEQQQRGLQK

Query:  LKGDRQ--KKESDG-FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDT
        LKG RQ  K   DG F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+E +EYVF+EYADGMAKLPLKQASR+LYRYNLPNE KRPR LS+L+DT
Subjt:  LKGDRQ--KKESDG-FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDT

Query:  TTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVS
        + WE+RKTKGKVAIQKMVVDLMELYLHRL+Q+R PYPK   M DF AQFPY  T DQK+AF DVEKDLTERETPMDRLICGDVGFGKTEVALRAI CVVS
Subjt:  TTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVS

Query:  AGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFK
         GKQAMVLAPTIVLAKQH++VI++RFS +P I++GLLSRFQTK EKE++LEMIK G LNIIVGTHSLLG RVVYSNLGLLVVDEEQRFGVKQKEKIASFK
Subjt:  AGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFK

Query:  TSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQY
        TS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV  AIK EL+RGGQVFYVLPRIKGLEEV DFLE +FPD +IA+AHGKQY
Subjt:  TSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQY

Query:  SKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLA
        SKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLS++ALERL+ALEECR+LGQGFQLA
Subjt:  SKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLA

Query:  ERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLR
        E+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+II+ AEKAA+ D+W+LMQFTENLR
Subjt:  ERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLR

Query:  RHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASL
        R +GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+T M+KKVF+LI+DSMT +V+R+ L +E  QI A LLLELPREQLLNW+F+CL ELHASL
Subjt:  RHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASL

Query:  PALIK
        PALIK
Subjt:  PALIK

Q49V12 Transcription-repair-coupling factor5.4e-12136.34Show/hide
Query:  DVMVPGTAKSARRREQIELQNDSISV---LNERIRRFHGRREVLKTAMDAEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFN--YKVDPY-TLRSGDY
        D  +   A++  ++E+I+   + + +   ++   RR  G   ++     +E  +     +    +R L K K  ++ K+        K+  Y  L+ GDY
Subjt:  DVMVPGTAKSARRREQIELQNDSISV---LNERIRRFHGRREVLKTAMDAEEADRYIQMVKEQQQRGLQKLKGDRQKKESDGFN--YKVDPY-TLRSGDY

Query:  VVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEY-ADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRL
        VVH   G+GR++G++  ++ G     +Y+ ++Y       +P+ Q  ++  +  + +E+K P+ L+KL   T W+K K K + +++ M  +L+ELY  R 
Subjt:  VVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEY-ADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRL

Query:  KQRRPPY-PKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSS
              + P  +   DF   FPYE T DQ ++  ++++D+ E E PMDRL+CGDVG+GKTEVA+RA    V  GKQ   L PT +LA+QH+E + +R   
Subjt:  KQRRPPY-PKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSS

Query:  FPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDAS
        FP I++ L+SRF+T  E ++  E +K G ++I+VGTH LLG  + Y +LGLL+VDEEQRFGV+ KE+I S K ++DVLTL+ATPIPRTL++++ G RD S
Subjt:  FPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDAS

Query:  LITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESG
        +I TPP  R P++T++   +   +K A++ EL R GQVFY+  +++ + E ++ L+   PD  I +AHG+   + LEETM +F   +  I++ T I+E+G
Subjt:  LITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESG

Query:  LDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDL
        +D+ NANT+I++D  +FGL+QLYQLRGRVGR+ +  +AY  +P   +LS  A +RL A++E  +LG GF++A RD+ IRG G + G+QQ G + +VG DL
Subjt:  LDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDL

Query:  FFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI
        + +ML +++++    +        ++I+++I+ +LP+EYI   ++ ++I     K        LM   + L       P  +E LL+ + ++  A   G+
Subjt:  FFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI

Query:  SRIYASGKTV
        + I   GK V
Subjt:  SRIYASGKTV

Q4L3G0 Transcription-repair-coupling factor3.5e-12037.93Show/hide
Query:  YIQMVKEQQQRGLQKLKGDRQKKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEY-ADGMAKLPLKQASRMLYRYNL
        Y+Q+V    +R L K K  +Q+K +   +   K+  Y  L  GDYVVH   G+GR++G++  ++ G     +Y+ ++Y       +P+ Q  ++  +  +
Subjt:  YIQMVKEQQQRGLQKLKGDRQKKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEY-ADGMAKLPLKQASRMLYRYNL

Query:  PNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMED-FTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDV
         +E+K P+ L+KL   + W+K K K + +++ +  +L+ LY  R       Y + ++ +  F   FPYE T DQ ++  +++ D+ ERE PMDRL+CGDV
Subjt:  PNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMED-FTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDV

Query:  GFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD
        G+GKTEVA+RA    V  GKQ   L PT +LA+QH+E + +R   FP +QI L+SRF++  E ++  E +K G ++I+VGTH LLG  + Y +LGLL+VD
Subjt:  GFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD

Query:  EEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFL
        EEQRFGV+ KE+I + KT++DVLTL+ATPIPRTL++++ G RD S+I TPP  R P++T++   +   +K A++ EL R GQVFY+  R++ + E ++ L
Subjt:  EEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFL

Query:  EASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALER
        +   PD  IA+AHG+   + LEETM +F  G+  IL+ T I+E+G+D+ NANT+I+++  +FGL+QLYQLRGRVGR+ +  +AY  +    +L+  A ER
Subjt:  EASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALER

Query:  LAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEK
        L A++E  +LG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +        V+++++++ +LP+EYI   +  ++I     K
Subjt:  LAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEK

Query:  AAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK--TVCMETKMNKKV
            +   L    + L       P  +E LL+ + ++  A   G++ I   GK   V + TK  +++
Subjt:  AAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK--TVCMETKMNKKV

Q55750 Transcription-repair-coupling factor2.8e-14944.07Show/hide
Query:  KKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDTTTWEKRKTK
        +K     + +VD   L  GDYVVHK  GIG+F  +K D         EY+ ++YADG+ ++P       L R+   +   RP  L K+     WE  K K
Subjt:  KKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDTTTWEKRKTK

Query:  GKVAIQKMVVDLMELYLHRLKQRRPPYPKCSS-MEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVSAG-KQAMV
         + A++K+ VDL+ LY  R KQ    YP  S   ++    FPY+PT DQ +A  DV++DL E + PMDRL+CGDVGFGKTEVA+RAI   V++G KQ  +
Subjt:  GKVAIQKMVVDLMELYLHRLKQRRPPYPKCSS-MEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVSAG-KQAMV

Query:  LAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLT
        LAPT VL +QH+  + +RF+ +P I IGLL+RF+T +EK++ L  +K G+L+I+VGT  +LG  V + +LGLLV+DEEQRFGV QKEKI + KT +DVLT
Subjt:  LAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLT

Query:  LSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQYSKQLEET
        L+ATPIPRTLY++L+G R+ SLITTPPP R PIKTHLS ++ E +++AI+ EL+RGGQVFYV+PRI+G+EE+   L    P   IA+ HG+    +LE T
Subjt:  LSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQYSKQLEET

Query:  MENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLAERDMGIR
        M  F  G+  IL+CT I+E+GLDI   NTIIV+D Q+FGLAQLYQLRGRVGR+  +AHA+L YP++  L+ +A  RL AL+E  +LG G+QLA RDM IR
Subjt:  MENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLAERDMGIR

Query:  GFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLRRHHGKEP
        G G + G +Q+G +  +G + + EML D++ ++    +  V  +  +ID+ +   +PS+YI  LE  M            D   L +   +    +G  P
Subjt:  GFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLRRHHGKEP

Query:  YSMEILLKKLYVRRMAADLGISRIYASGK-TVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWI
          +E L K + ++ +A  LG SRI   GK  + +ET M +  ++L+++++ + +    +   +  +  GL +  P +Q+ N I
Subjt:  YSMEILLKKLYVRRMAADLGISRIYASGK-TVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWI

Q5HRQ2 Transcription-repair-coupling factor3.9e-11937.86Show/hide
Query:  YIQMVKEQQQRGLQKLKGDRQKKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEY-ADGMAKLPLKQASRMLYRYNL
        Y+Q+V    +R L K +  +Q+K +   +   K+  Y  L  GDY+VH   G+GR++G++  ++ G T   +Y+ ++Y       +P+ Q  ++  +  +
Subjt:  YIQMVKEQQQRGLQKLKGDRQKKESDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEY-ADGMAKLPLKQASRMLYRYNL

Query:  PNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMED-FTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDV
         +E+K PR L+KL   T W+K K K + +++ +  +L++LY  R       Y + ++ +  F   FPYE T DQ ++  +++ D+ ER  PMDRL+CGDV
Subjt:  PNENKRPRALSKLNDTTTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMED-FTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDV

Query:  GFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD
        G+GKTEVA+RA    V  GKQ   L PT +LA+QH+E + +R   FP ++I L+SRF+T  E  +  E +K G ++I+VGTH LLG  + Y +LGLL+VD
Subjt:  GFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVD

Query:  EEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFL
        EEQRFGV+ KE+I + K ++DVLTL+ATPIPRTL++++ G RD S+I TPP  R P++T++   +   +K A++ EL R GQVFY+  +++ + E ++ L
Subjt:  EEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFL

Query:  EASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALER
        +   PD  IA+AHG+   + LEETM +F   +  IL+ T I+E+G+D+ NANT+I+++  +FGL+QLYQLRGRVGR+ +  +AY  +P   +L+  A ER
Subjt:  EASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALER

Query:  LAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEK
        L A++E  +LG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +  S     +++++ ++ +LP+EYI   +  ++I     K
Subjt:  LAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEK

Query:  AAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTV
            +   L    + L       P  +E LL  + ++  A   G+  I   GK++
Subjt:  AAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTV

Arabidopsis top hitse value%identityAlignment
AT1G71370.1 DEA(D/H)-box RNA helicase family protein2.7e-0621.4Show/hide
Query:  MVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVV------YSNLGLLVVDEEQR-----FGVKQKE
        ++++PT  L+ Q  +V     S+ P++   LL   +   E E  +  ++E   N+++GT   L D +       + NL +L++DE  R     F  +   
Subjt:  MVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVV------YSNLGLLVVDEEQR-----FGVKQKE

Query:  KIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYEL------ERGGQVFYVLPRIKGLEEVKDFLEASFP
         I+           SAT       LA  G R+A  + +             + SK K  S +  E       ++  Q+ ++L   K  + V  F+  +  
Subjt:  KIASFKTSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYEL------ERGGQVFYVLPRIKGLEEVKDFLEASFP

Query:  D--------------TEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK
        D                    HGK   K  +  + +F      +L+CT++   GLDI   + ++  D  Q     ++++ GR  R +++  A +F   K
Subjt:  D--------------TEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK

AT2G01440.1 DEAD/DEAH box RNA helicase family protein1.1e-5534.86Show/hide
Query:  EDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQ----IGLLS
        + F    PY  T  Q  A S++  DL +R  PM+RL+ GDVG GKT VA  A   V+ +G QA  +APT +LA QH+E       +   +     IGLL+
Subjt:  EDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQ----IGLLS

Query:  RFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIAS--FKTSI---------------------DVLTLSATPIPR
              +     + ++ G ++ I+GTHSL+ +++ YS L + VVDE+QRFGV Q+ K  S  + TS+                      VL +SATPIPR
Subjt:  RFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIAS--FKTSI---------------------DVLTLSATPIPR

Query:  TLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVK---SAIKYELERGGQVFYVLPRIKGLEEVKDFLEAS---------FPDTEIALAHGKQYSKQ
        +L LAL G    + IT  P  R+P++TH+   ++  +K   S +  +L+ GG+V+ V P I   E++     AS         FP     L HG+  S  
Subjt:  TLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVK---SAIKYELERGGQVFYVLPRIKGLEEVKDFLEAS---------FPDTEIALAHGKQYSKQ

Query:  LEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLAERD
         EE +  F  G+ +IL+ T ++E G+D+ +A+ ++V + ++FG+AQL+QLRGRVGR  +++        K LL   +   L  L    K   GF LA  D
Subjt:  LEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLAERD

Query:  MGIRGFGTIFGEQQTG
        + +RG G + G++Q+G
Subjt:  MGIRGFGTIFGEQQTG

AT3G02060.1 DEAD/DEAH box helicase, putative0.0e+0078.88Show/hide
Query:  SFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIEL-QNDSISVLNERIRRFHGRREVLKTAMDAEEADRYIQMVKEQQQRGLQK
        SFP    LF  +   R   R+  S+  +V A   +    AK  R RE+ EL ++DSIS+LNERIRR  G+RE  + AMD+EEA++YI MVKEQQ+RGLQK
Subjt:  SFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIEL-QNDSISVLNERIRRFHGRREVLKTAMDAEEADRYIQMVKEQQQRGLQK

Query:  LKGDRQ--KKESDG-FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDT
        LKG RQ  K   DG F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+E +EYVF+EYADGMAKLPLKQASR+LYRYNLPNE KRPR LS+L+DT
Subjt:  LKGDRQ--KKESDG-FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDT

Query:  TTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVS
        + WE+RKTKGKVAIQKMVVDLMELYLHRL+Q+R PYPK   M DF AQFPY  T DQK+AF DVEKDLTERETPMDRLICGDVGFGKTEVALRAI CVVS
Subjt:  TTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVS

Query:  AGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFK
         GKQAMVLAPTIVLAKQH++VI++RFS +P I++GLLSRFQTK EKE++LEMIK G LNIIVGTHSLLG RVVYSNLGLLVVDEEQRFGVKQKEKIASFK
Subjt:  AGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFK

Query:  TSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQY
        TS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV  AIK EL+RGGQVFYVLPRIKGLEEV DFLE +FPD +IA+AHGKQY
Subjt:  TSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQY

Query:  SKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLA
        SKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLS++ALERL+ALEECR+LGQGFQLA
Subjt:  SKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLA

Query:  ERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLR
        E+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+II+ AEKAA+ D+W+LMQFTENLR
Subjt:  ERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLR

Query:  RHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASL
        R +GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+T M+KKVF+LI+DSMT +V+R+ L +E  QI A LLLELPREQLLNW+F+CL ELHASL
Subjt:  RHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASL

Query:  PALIK
        PALIK
Subjt:  PALIK

AT3G02060.2 DEAD/DEAH box helicase, putative0.0e+0078.88Show/hide
Query:  SFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIEL-QNDSISVLNERIRRFHGRREVLKTAMDAEEADRYIQMVKEQQQRGLQK
        SFP    LF  +   R   R+  S+  +V A   +    AK  R RE+ EL ++DSIS+LNERIRR  G+RE  + AMD+EEA++YI MVKEQQ+RGLQK
Subjt:  SFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIEL-QNDSISVLNERIRRFHGRREVLKTAMDAEEADRYIQMVKEQQQRGLQK

Query:  LKGDRQ--KKESDG-FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDT
        LKG RQ  K   DG F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+E +EYVF+EYADGMAKLPLKQASR+LYRYNLPNE KRPR LS+L+DT
Subjt:  LKGDRQ--KKESDG-FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDT

Query:  TTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVS
        + WE+RKTKGKVAIQKMVVDLMELYLHRL+Q+R PYPK   M DF AQFPY  T DQK+AF DVEKDLTERETPMDRLICGDVGFGKTEVALRAI CVVS
Subjt:  TTWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVS

Query:  AGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFK
         GKQAMVLAPTIVLAKQH++VI++RFS +P I++GLLSRFQTK EKE++LEMIK G LNIIVGTHSLLG RVVYSNLGLLVVDEEQRFGVKQKEKIASFK
Subjt:  AGKQAMVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFK

Query:  TSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQY
        TS+DVLTLSATPIPRTLYLALTGFRDASLI+TPPPER+PIKTHLSSF KEKV  AIK EL+RGGQVFYVLPRIKGLEEV DFLE +FPD +IA+AHGKQY
Subjt:  TSIDVLTLSATPIPRTLYLALTGFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQY

Query:  SKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLA
        SKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLS++ALERL+ALEECR+LGQGFQLA
Subjt:  SKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLA

Query:  ERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLR
        E+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+II+ AEKAA+ D+W+LMQFTENLR
Subjt:  ERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLR

Query:  RHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASL
        R +GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+T M+KKVF+LI+DSMT +V+R+ L +E  QI A LLLELPREQLLNW+F+CL ELHASL
Subjt:  RHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLISDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASL

Query:  PALIK
        PALIK
Subjt:  PALIK

AT5G26742.1 DEAD box RNA helicase (RH3)1.0e-0524.33Show/hide
Query:  MVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL-----LVVDE-EQRFGVKQKEKIASF
        +VLAPT  LAKQ  + I +   S P +    +    + T ++  L       ++++VGT   + D +   +L L     LV+DE +Q   V  +E + S 
Subjt:  MVLAPTIVLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL-----LVVDE-EQRFGVKQKEKIASF

Query:  KTSID---------------VLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFL
          ++                V  L+   +   L + L G +D  L      E + +     +S SK  + S +     +GG+        +  +EV   L
Subjt:  KTSID---------------VLTLSATPIPRTLYLALTGFRDASLITTPPPERVPI-KTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFL

Query:  EASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALER
          S     +   HG     Q E T+  F  G   +L+ T++   GLDI N + +I  ++       +++  GR GRA KE  A L +      +  +LER
Subjt:  EASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTACTTTCACCCGCGCCAGACGTTTCTTCTTCCAGACCTCTAGCAGCTTTCAGACACGGCTCATTTCCCAGGCTATGGGGGTTATTCAACCGCAACTGCACCTT
CCGGCACAGCCCTAGGCGATGCGTTTCGATTTCTAACGTCGTCTATGCCGAAGACGTTATGGTTCCCGGTACGGCGAAATCGGCGAGGCGGAGAGAGCAAATTGAGCTCC
AGAACGACTCGATTTCGGTTCTCAATGAGCGGATTCGGCGGTTCCATGGGCGGAGGGAGGTATTGAAGACGGCTATGGACGCCGAGGAGGCGGACCGGTATATACAGATG
GTGAAGGAGCAGCAGCAAAGGGGGTTGCAGAAGTTGAAAGGGGATAGGCAAAAGAAAGAGAGTGATGGGTTTAATTATAAGGTCGATCCTTACACGCTTCGTTCTGGGGA
TTATGTTGTGCATAAGAAGGTCGGTATTGGCCGATTTGTTGGGATTAAATTTGACGTTCAGAAGGGCTCTACGGAGGCTGTTGAGTATGTGTTCGTTGAGTATGCTGATG
GGATGGCAAAACTCCCTCTTAAGCAGGCGTCTCGAATGCTGTATCGCTATAATCTCCCAAATGAAAACAAAAGACCTCGGGCATTGAGCAAACTAAATGACACTACCACA
TGGGAAAAGAGAAAGACCAAGGGAAAGGTTGCAATTCAGAAGATGGTTGTTGACTTGATGGAACTGTATTTACATAGGTTGAAACAGAGAAGGCCTCCCTACCCAAAGTG
TTCGTCTATGGAGGACTTTACTGCTCAGTTTCCTTACGAGCCTACAGTGGACCAAAAGGAGGCTTTCAGTGATGTTGAGAAAGATTTGACCGAGAGGGAAACTCCGATGG
ACAGATTGATTTGTGGGGATGTTGGCTTTGGTAAAACTGAGGTTGCACTGCGTGCAATTTGCTGTGTAGTCTCAGCGGGAAAGCAAGCCATGGTTCTAGCACCAACGATA
GTCCTTGCCAAACAGCATTTTGAAGTTATCACACAGAGATTTTCTTCATTTCCTGATATCCAGATTGGACTTTTGAGCAGGTTCCAGACAAAAACGGAGAAAGAGAAGCA
TCTAGAAATGATCAAAGAAGGTCAATTGAACATTATTGTTGGGACTCACTCACTCCTTGGAGATCGTGTTGTGTATAGTAATTTAGGGCTTCTAGTTGTTGATGAAGAAC
AGAGGTTTGGTGTCAAACAGAAAGAGAAAATTGCTTCTTTTAAAACTTCAATTGATGTTCTTACTCTCTCCGCAACACCGATACCTCGGACCCTCTATTTAGCATTGACT
GGATTTCGTGATGCTAGCTTGATTACAACTCCACCTCCAGAAAGAGTTCCAATAAAAACCCATCTCTCATCATTCAGTAAAGAAAAAGTGAAATCGGCTATTAAATATGA
GCTGGAACGTGGAGGCCAAGTTTTTTATGTCTTACCTCGAATTAAAGGACTTGAGGAAGTGAAGGATTTTCTTGAGGCAAGTTTTCCAGACACTGAAATAGCTCTTGCTC
ATGGAAAGCAATACTCAAAGCAACTTGAAGAAACCATGGAAAATTTTGCACTTGGTGATATTAAGATTCTTATATGCACAAATATTGTTGAAAGTGGTCTGGATATACAA
AATGCAAACACCATCATTGTTCAGGATGTTCAACAATTTGGGTTAGCACAATTATACCAGCTGCGTGGAAGGGTGGGCCGTGCAGACAAGGAAGCACATGCATACTTGTT
TTACCCAGACAAATCCCTACTATCCAATGAAGCACTGGAAAGGCTTGCTGCCCTTGAAGAATGCCGTAAACTTGGGCAAGGTTTTCAACTCGCCGAGAGAGACATGGGCA
TAAGAGGTTTTGGTACCATCTTCGGCGAGCAACAAACTGGTGACGTTGGAAATGTGGGCATCGATCTCTTCTTTGAAATGCTTTTTGACAGCCTGTCTAAGGTTGACGAA
CACAGGGTAGTCTCTGTCCCATACCAGTCAGTAAAGATTGATATCGATATTAATCCTCATTTGCCTTCTGAGTACATTAATTATTTGGAGAATCCCATGAAAATAATTAA
TGGTGCTGAGAAAGCTGCTCAGGCAGACATCTGGACTTTAATGCAATTTACTGAGAATTTGCGCCGTCACCATGGAAAAGAGCCTTACTCCATGGAGATTCTGCTGAAGA
AGCTTTATGTGAGGAGAATGGCAGCGGATCTAGGAATTTCTCGAATATATGCTTCTGGAAAGACCGTTTGTATGGAAACTAAAATGAATAAGAAAGTATTCCAGTTGATA
TCTGATTCAATGACATCAGAGGTGCATCGAAATTGTTTGTCTTTTGAGGAACATCAGATCAAGGCTGGACTTCTCTTAGAGCTACCGAGAGAACAACTTCTAAATTGGAT
CTTCGAGTGCTTAGTGGAACTTCATGCTTCCCTCCCAGCCTTGATAAAATGCTAG
mRNA sequenceShow/hide mRNA sequence
AATTAATCGGCCCAAATCCAAAAACCCCTCCAAAACCTCCACAATATTATCCGCTCTGTAAATTTCCCCACATTCACAAAGCTCTCTTCCAGTTCTTCAATGGCGGATTT
TCAATCTCCATTATCATCTTCTCTCAAATCTTCCCTTACATAGCAATACCTTACCAGTCACTGCTTGTCTTCCATTTCTCTCTTAGGTTAATTTGTTTTAATGGCTCTAC
TTTCACCCGCGCCAGACGTTTCTTCTTCCAGACCTCTAGCAGCTTTCAGACACGGCTCATTTCCCAGGCTATGGGGGTTATTCAACCGCAACTGCACCTTCCGGCACAGC
CCTAGGCGATGCGTTTCGATTTCTAACGTCGTCTATGCCGAAGACGTTATGGTTCCCGGTACGGCGAAATCGGCGAGGCGGAGAGAGCAAATTGAGCTCCAGAACGACTC
GATTTCGGTTCTCAATGAGCGGATTCGGCGGTTCCATGGGCGGAGGGAGGTATTGAAGACGGCTATGGACGCCGAGGAGGCGGACCGGTATATACAGATGGTGAAGGAGC
AGCAGCAAAGGGGGTTGCAGAAGTTGAAAGGGGATAGGCAAAAGAAAGAGAGTGATGGGTTTAATTATAAGGTCGATCCTTACACGCTTCGTTCTGGGGATTATGTTGTG
CATAAGAAGGTCGGTATTGGCCGATTTGTTGGGATTAAATTTGACGTTCAGAAGGGCTCTACGGAGGCTGTTGAGTATGTGTTCGTTGAGTATGCTGATGGGATGGCAAA
ACTCCCTCTTAAGCAGGCGTCTCGAATGCTGTATCGCTATAATCTCCCAAATGAAAACAAAAGACCTCGGGCATTGAGCAAACTAAATGACACTACCACATGGGAAAAGA
GAAAGACCAAGGGAAAGGTTGCAATTCAGAAGATGGTTGTTGACTTGATGGAACTGTATTTACATAGGTTGAAACAGAGAAGGCCTCCCTACCCAAAGTGTTCGTCTATG
GAGGACTTTACTGCTCAGTTTCCTTACGAGCCTACAGTGGACCAAAAGGAGGCTTTCAGTGATGTTGAGAAAGATTTGACCGAGAGGGAAACTCCGATGGACAGATTGAT
TTGTGGGGATGTTGGCTTTGGTAAAACTGAGGTTGCACTGCGTGCAATTTGCTGTGTAGTCTCAGCGGGAAAGCAAGCCATGGTTCTAGCACCAACGATAGTCCTTGCCA
AACAGCATTTTGAAGTTATCACACAGAGATTTTCTTCATTTCCTGATATCCAGATTGGACTTTTGAGCAGGTTCCAGACAAAAACGGAGAAAGAGAAGCATCTAGAAATG
ATCAAAGAAGGTCAATTGAACATTATTGTTGGGACTCACTCACTCCTTGGAGATCGTGTTGTGTATAGTAATTTAGGGCTTCTAGTTGTTGATGAAGAACAGAGGTTTGG
TGTCAAACAGAAAGAGAAAATTGCTTCTTTTAAAACTTCAATTGATGTTCTTACTCTCTCCGCAACACCGATACCTCGGACCCTCTATTTAGCATTGACTGGATTTCGTG
ATGCTAGCTTGATTACAACTCCACCTCCAGAAAGAGTTCCAATAAAAACCCATCTCTCATCATTCAGTAAAGAAAAAGTGAAATCGGCTATTAAATATGAGCTGGAACGT
GGAGGCCAAGTTTTTTATGTCTTACCTCGAATTAAAGGACTTGAGGAAGTGAAGGATTTTCTTGAGGCAAGTTTTCCAGACACTGAAATAGCTCTTGCTCATGGAAAGCA
ATACTCAAAGCAACTTGAAGAAACCATGGAAAATTTTGCACTTGGTGATATTAAGATTCTTATATGCACAAATATTGTTGAAAGTGGTCTGGATATACAAAATGCAAACA
CCATCATTGTTCAGGATGTTCAACAATTTGGGTTAGCACAATTATACCAGCTGCGTGGAAGGGTGGGCCGTGCAGACAAGGAAGCACATGCATACTTGTTTTACCCAGAC
AAATCCCTACTATCCAATGAAGCACTGGAAAGGCTTGCTGCCCTTGAAGAATGCCGTAAACTTGGGCAAGGTTTTCAACTCGCCGAGAGAGACATGGGCATAAGAGGTTT
TGGTACCATCTTCGGCGAGCAACAAACTGGTGACGTTGGAAATGTGGGCATCGATCTCTTCTTTGAAATGCTTTTTGACAGCCTGTCTAAGGTTGACGAACACAGGGTAG
TCTCTGTCCCATACCAGTCAGTAAAGATTGATATCGATATTAATCCTCATTTGCCTTCTGAGTACATTAATTATTTGGAGAATCCCATGAAAATAATTAATGGTGCTGAG
AAAGCTGCTCAGGCAGACATCTGGACTTTAATGCAATTTACTGAGAATTTGCGCCGTCACCATGGAAAAGAGCCTTACTCCATGGAGATTCTGCTGAAGAAGCTTTATGT
GAGGAGAATGGCAGCGGATCTAGGAATTTCTCGAATATATGCTTCTGGAAAGACCGTTTGTATGGAAACTAAAATGAATAAGAAAGTATTCCAGTTGATATCTGATTCAA
TGACATCAGAGGTGCATCGAAATTGTTTGTCTTTTGAGGAACATCAGATCAAGGCTGGACTTCTCTTAGAGCTACCGAGAGAACAACTTCTAAATTGGATCTTCGAGTGC
TTAGTGGAACTTCATGCTTCCCTCCCAGCCTTGATAAAATGCTAGTCTTATTACAGCTGGTTTTACCATGATTATCTTAATCACAAGGTTGCTACATGCATTTAACATCC
ATTTACCAGGCTTGTTCTTTTGTAAGCCTGAAATATAGACTTGGCCTCATAGCTCTCTGATCACGAAGCTTTTGTCATGGAGAATCTCAAGTCTTTGTGCCTCTATCATA
TCATGATATACAATGCCAGGCAAAACTATATTACATTTTGTTTGTAAGTTGAAACGAGCTGATGGGGATATCACTTTAGAGCATTGTTTTAAGGATGCAATTATCTGTCC
AGAATAAATTAGCAGTGTCCGGGATCTGCTCGTATAGTCGTATATATGACGACATCGAGACTCCTAGAAAGGCTAAGACTTCATTCAGGTCACAATTTGTTATGTCCCTT
GTGCCTGTATATCATATTCTTTAAATCTTGGTATCAAAGTTTGATTAGAAGCACGATTATGTTTTATTCTGACCATAAATTTAAATGTAGTTTTCGCAAAACTTTTTCTG
AAGGGTATATTGTAAAGAAATATAACTATAAAATATTTAGGGAAGGGTTGAAGTAGGAACCAACCAGCATGGAGTTATTGAACATTTTGCAAGACGTTGTAAAAGAAAG
Protein sequenceShow/hide protein sequence
MALLSPAPDVSSSRPLAAFRHGSFPRLWGLFNRNCTFRHSPRRCVSISNVVYAEDVMVPGTAKSARRREQIELQNDSISVLNERIRRFHGRREVLKTAMDAEEADRYIQM
VKEQQQRGLQKLKGDRQKKESDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAVEYVFVEYADGMAKLPLKQASRMLYRYNLPNENKRPRALSKLNDTTT
WEKRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKCSSMEDFTAQFPYEPTVDQKEAFSDVEKDLTERETPMDRLICGDVGFGKTEVALRAICCVVSAGKQAMVLAPTI
VLAKQHFEVITQRFSSFPDIQIGLLSRFQTKTEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALT
GFRDASLITTPPPERVPIKTHLSSFSKEKVKSAIKYELERGGQVFYVLPRIKGLEEVKDFLEASFPDTEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQ
NANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSNEALERLAALEECRKLGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDE
HRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIINGAEKAAQADIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKTVCMETKMNKKVFQLI
SDSMTSEVHRNCLSFEEHQIKAGLLLELPREQLLNWIFECLVELHASLPALIKC