; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001433 (gene) of Chayote v1 genome

Gene IDSed0001433
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG04:28107609..28108456
RNA-Seq ExpressionSed0001433
SyntenySed0001433
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]6.3e-3046.9Show/hide
Query:  GGLALLWTKDVEVRIRPYSRNHIDCSI-SFDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIV
        GGL+LLW  D+ VR++ +S +HID  I   D   WRF+G+YG+PE  N++LT+ LL+ L +G    WL+GGDFNE L  +EKRG        M AF+ ++
Subjt:  GGLALLWTKDVEVRIRPYSRNHIDCSI-SFDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIV

Query:  NELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
         +  LRDL F G  +TW N  +    I +R+DRFL N  FCALFP
Subjt:  NELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

XP_012851712.1 PREDICTED: uncharacterized protein LOC105971405 [Erythranthe guttata]2.8e-2542.47Show/hide
Query:  GGLALLWTKDVEVRIRPYSRNHIDCSISFDSKN--WRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKI
        GGLAL+W KD++VR+  YS NHID  +   + N  WR +G YG PE   K+L++EL+++L +     WLLGGDFNE L   EK G +     S+ AF+  
Subjt:  GGLALLWTKDVEVRIRPYSRNHIDCSISFDSKN--WRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKI

Query:  VNELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
        + +  L DL F G  FTW+N     + +  R+DR  AN  + +LFP
Subjt:  VNELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

XP_012857846.1 PREDICTED: uncharacterized protein LOC105977118 [Erythranthe guttata]2.1e-2542.47Show/hide
Query:  GGLALLWTKDVEVRIRPYSRNHIDCSISFDSKN--WRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKI
        GGLAL+W KD++VR+  YS NHID  +   + N  WR +G YG PE   K+L++EL+++L +     WLLGGDFNE L   EK G +     S+ AF+  
Subjt:  GGLALLWTKDVEVRIRPYSRNHIDCSISFDSKN--WRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKI

Query:  VNELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
        + +  L DL F G  FTW+N     + +  R+DR  AN  + +LFP
Subjt:  VNELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

XP_021737580.1 uncharacterized protein LOC110704109 [Chenopodium quinoa]1.5e-2645Show/hide
Query:  LWTKDVEVRIRPYSRNHIDCSIS-FDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIVNELLL
        +W   ++V +  YS+NHID  +S      WRFSGIYG PEE+NKF T  LLK+L+NG  +SWLLGGDFN  ++ +EK+G    F++    F++ ++   L
Subjt:  LWTKDVEVRIRPYSRNHIDCSIS-FDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIVNELLL

Query:  RDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
         DL +IG  FTW+N     E I +R+D FLAN  +   FP
Subjt:  RDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

XP_035545013.1 uncharacterized protein LOC108979776 [Juglans regia]6.3e-3039.88Show/hide
Query:  KSLVVSSDPDLVEV----IRLHSPSVGGLALLWTKDVEVRIRPYSRNHIDCSISFD-SKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSS--WLLGGD
        + L+   DP +V +    ++      GGLALLW  D++VR++ +S NH+D  ++ D ++ WRF+GIYG+P+  ++FLT++L++ L++ D     WLLGGD
Subjt:  KSLVVSSDPDLVEV----IRLHSPSVGGLALLWTKDVEVRIRPYSRNHIDCSISFD-SKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSS--WLLGGD

Query:  FNEALRGDEKRGVSHDFSQSMVAFQKIVNELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
        FNE L+  EK+         M AF++++ +  LRD+ F G  FTW+N     E I +R+DRFL N +F  LFP
Subjt:  FNEALRGDEKRGVSHDFSQSMVAFQKIVNELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

TrEMBL top hitse value%identityAlignment
A0A2N9HWM9 Reverse transcriptase domain-containing protein6.6e-2540.69Show/hide
Query:  GGLALLWTKDVEVRIRPYSRNHIDCSI-SFDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIV
        GGLALLW   V+++I+ YS++HIDC + +   ++WRF+G YG P+   +  ++ELL+ L       WL+ GDFNE    DEK+G      + M AF++++
Subjt:  GGLALLWTKDVEVRIRPYSRNHIDCSI-SFDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIV

Query:  NELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
        N+  L DL F G  FTWTN  ++ E + +R+DR +A   +  LFP
Subjt:  NELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

A0A2N9J5D9 CCHC-type domain-containing protein8.7e-2540.69Show/hide
Query:  GGLALLWTKDVEVRIRPYSRNHIDCSI-SFDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIV
        GGLALLW   V+++I+ YS++HIDC + +   ++WRF+G YG P+   +  ++ELL+ L       WL+ GDFNE    DEK+G        M AF++++
Subjt:  GGLALLWTKDVEVRIRPYSRNHIDCSI-SFDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIV

Query:  NELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
        N+  L DL F G  FTWTN  ++ E + +R+DR +A   +  LFP
Subjt:  NELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

A0A6P9EM92 uncharacterized protein LOC1089797763.1e-3039.88Show/hide
Query:  KSLVVSSDPDLVEV----IRLHSPSVGGLALLWTKDVEVRIRPYSRNHIDCSISFD-SKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSS--WLLGGD
        + L+   DP +V +    ++      GGLALLW  D++VR++ +S NH+D  ++ D ++ WRF+GIYG+P+  ++FLT++L++ L++ D     WLLGGD
Subjt:  KSLVVSSDPDLVEV----IRLHSPSVGGLALLWTKDVEVRIRPYSRNHIDCSISFD-SKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSS--WLLGGD

Query:  FNEALRGDEKRGVSHDFSQSMVAFQKIVNELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
        FNE L+  EK+         M AF++++ +  LRD+ F G  FTW+N     E I +R+DRFL N +F  LFP
Subjt:  FNEALRGDEKRGVSHDFSQSMVAFQKIVNELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

A0A803LZT1 Uncharacterized protein6.6e-2542.86Show/hide
Query:  LWTKDVEVRIRPYSRNHIDCSIS-FDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIVNELLL
        +W   ++V +  YS+NHID  +S      WRFSGIYG PEE+NK  T  +LK+L+NG    WLLGGDFN  L+  EK+G     ++    F++ ++   L
Subjt:  LWTKDVEVRIRPYSRNHIDCSIS-FDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIVNELLL

Query:  RDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
         D+ +IG  FTW+N     E I +R+DRFLAN  +   FP
Subjt:  RDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

A0A803M8Y9 Uncharacterized protein8.7e-2544.14Show/hide
Query:  GGLALLWTKDVEVRIRPYSRNHIDCSISFDSK-NWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIV
        GGLALLW   ++V I+ YS+NHID  + F  K  WRF+G+YG PEE+NK  T  LL++L     + W+ GGDFN  L   EK+G +         F+  V
Subjt:  GGLALLWTKDVEVRIRPYSRNHIDCSISFDSK-NWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIV

Query:  NELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP
            L DL FIG  FTWTN       + +R+DR+LAN+ +  LFP
Subjt:  NELLLRDLRFIGDIFTWTNRCSKWEPIWKRIDRFLANEAFCALFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTCTTGGAGATGTTGAATTTAAGTACTGTGCTTTCTAGATTTAGCCCAACAAGAAGTGAAGGTCAGAGTGATATAGGTAATTGGCAATCTAGAGAAGTGTTGGG
CACCTCTAAGAATAAGCCAATTGAAGGTGAAATTGAAGCAGTTTCTGGAAGAGAATTGATGGTGTTTCATGCAAAATCTCTAGGCCATGATGATATCTCTAATAAGTTTC
GAAATCTGAAAAAAGAAAGGAAATCCCTAGTCGTTTCATCTGATCCTGATTTAGTGGAGGTGATTCGTCTCCATAGTCCTTCGGTCGGAGGACTTGCTCTTTTATGGACC
AAAGATGTCGAGGTAAGGATCCGACCTTATTCTCGAAACCACATTGATTGTTCTATCTCTTTTGATAGTAAGAATTGGAGATTTTCTGGAATTTATGGAAGTCCAGAGGA
GAAGAATAAATTCTTGACGTTTGAACTTTTAAAACATTTATATAATGGGGATTATTCTTCTTGGCTTCTTGGAGGAGATTTTAATGAGGCTTTAAGGGGTGATGAGAAAC
GAGGAGTATCTCATGATTTTAGTCAATCTATGGTGGCTTTTCAGAAAATTGTTAATGAACTTTTGCTTCGGGATCTTCGTTTTATAGGTGACATTTTTACATGGACTAAT
AGATGTTCTAAATGGGAGCCAATCTGGAAACGAATTGACCGTTTTCTTGCTAATGAGGCTTTTTGTGCTTTGTTTCCTAATCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGTCTTGGAGATGTTGAATTTAAGTACTGTGCTTTCTAGATTTAGCCCAACAAGAAGTGAAGGTCAGAGTGATATAGGTAATTGGCAATCTAGAGAAGTGTTGGG
CACCTCTAAGAATAAGCCAATTGAAGGTGAAATTGAAGCAGTTTCTGGAAGAGAATTGATGGTGTTTCATGCAAAATCTCTAGGCCATGATGATATCTCTAATAAGTTTC
GAAATCTGAAAAAAGAAAGGAAATCCCTAGTCGTTTCATCTGATCCTGATTTAGTGGAGGTGATTCGTCTCCATAGTCCTTCGGTCGGAGGACTTGCTCTTTTATGGACC
AAAGATGTCGAGGTAAGGATCCGACCTTATTCTCGAAACCACATTGATTGTTCTATCTCTTTTGATAGTAAGAATTGGAGATTTTCTGGAATTTATGGAAGTCCAGAGGA
GAAGAATAAATTCTTGACGTTTGAACTTTTAAAACATTTATATAATGGGGATTATTCTTCTTGGCTTCTTGGAGGAGATTTTAATGAGGCTTTAAGGGGTGATGAGAAAC
GAGGAGTATCTCATGATTTTAGTCAATCTATGGTGGCTTTTCAGAAAATTGTTAATGAACTTTTGCTTCGGGATCTTCGTTTTATAGGTGACATTTTTACATGGACTAAT
AGATGTTCTAAATGGGAGCCAATCTGGAAACGAATTGACCGTTTTCTTGCTAATGAGGCTTTTTGTGCTTTGTTTCCTAATCTCTAA
Protein sequenceShow/hide protein sequence
MNVLEMLNLSTVLSRFSPTRSEGQSDIGNWQSREVLGTSKNKPIEGEIEAVSGRELMVFHAKSLGHDDISNKFRNLKKERKSLVVSSDPDLVEVIRLHSPSVGGLALLWT
KDVEVRIRPYSRNHIDCSISFDSKNWRFSGIYGSPEEKNKFLTFELLKHLYNGDYSSWLLGGDFNEALRGDEKRGVSHDFSQSMVAFQKIVNELLLRDLRFIGDIFTWTN
RCSKWEPIWKRIDRFLANEAFCALFPNL