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Sed0001446 (gene) of Chayote v1 genome

Gene IDSed0001446
OrganismSechium edule (Chayote v1)
DescriptionCox19-like CHCH family protein
Genome locationLG05:5489112..5490285
RNA-Seq ExpressionSed0001446
SyntenySed0001446
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042698.1 Cox19-like CHCH family protein [Cucumis melo var. makuwa]2.7e-1983.87Show/hide
Query:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKPTKK
        D+ Q QPVCA+EAL+LLNCVTESPFDQ+KCY LLHSLRECVLSKKVKKFSLAEEEQ KP  K
Subjt:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKPTKK

KAF3957670.1 hypothetical protein CMV_017341 [Castanea mollissima]5.2e-1572.41Show/hide
Query:  SQDQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQ
        SQ ++Q++PVC KEALDLLNCVT+SP+DQ+KC  LL SLR+CVL+KKVKKFSLA++EQ
Subjt:  SQDQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQ

KAF5734209.1 hypothetical protein HS088_TW16G00654 [Tripterygium wilfordii]1.0e-1580Show/hide
Query:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEE
        D+A+A+PVCA+EALDLLNCVT+SPFDQEKC  LL+SLRECVL+KKVKKFSLA++E
Subjt:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEE

KAG6606053.1 hypothetical protein SDJN03_03370, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1981.25Show/hide
Query:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKPTKKSA
        D AQAQPVCA+EALDLLNCVT+SPFDQEKCY LLHSLRECVLSKKVKKFSLA+EE+ K + K +
Subjt:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKPTKKSA

KGN50036.1 hypothetical protein Csa_000619 [Cucumis sativus]1.2e-1984.62Show/hide
Query:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKP-TKKSA
        D+ Q QPVCA+EAL+LLNCVTESPFDQEKCY LLHSLRECVLSKKVKKFSLAEEEQ KP  KK+A
Subjt:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKP-TKKSA

TrEMBL top hitse value%identityAlignment
A0A0A0KQS7 Uncharacterized protein5.8e-2084.62Show/hide
Query:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKP-TKKSA
        D+ Q QPVCA+EAL+LLNCVTESPFDQEKCY LLHSLRECVLSKKVKKFSLAEEEQ KP  KK+A
Subjt:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKP-TKKSA

A0A2G5E019 Uncharacterized protein4.3e-1565.79Show/hide
Query:  MDESQAQAQSQSQDQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKPTKKS
        M +SQ Q + Q Q Q+Q+Q VCA+E+L+LLNCVTESPFDQEKC  LL+SLR CVL+KKVKKFSLAE+ Q + +K S
Subjt:  MDESQAQAQSQSQDQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKPTKKS

A0A5D3C4E2 Cox19-like CHCH family protein1.3e-1983.87Show/hide
Query:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKPTKK
        D+ Q QPVCA+EAL+LLNCVTESPFDQ+KCY LLHSLRECVLSKKVKKFSLAEEEQ KP  K
Subjt:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKPTKK

A0A5N6R867 Uncharacterized protein9.6e-1570.31Show/hide
Query:  AQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQ--VKPTKKSA
        AQ+QPVCA+EALDLLNCV +SP+DQ+KC  LL SLRECVL+KKVKKFSLA++ Q   KP  K A
Subjt:  AQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQ--VKPTKKSA

A0A7J7CJI7 Uncharacterized protein5.1e-1680Show/hide
Query:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEE
        D+A+A+PVCA+EALDLLNCVT+SPFDQEKC  LL+SLRECVL+KKVKKFSLA++E
Subjt:  DQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23760.1 Cox19-like CHCH family protein1.5e-1564.91Show/hide
Query:  SQDQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEE
        S ++   QP+C +EAL LLNCV ESPFDQEKC   L SLRECVLSKKVKKFS+  ++
Subjt:  SQDQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATCTCAAGCTCAAGCTCAATCTCAATCTCAAGATCAAGCTCAAGCTCAACCGGTTTGCGCTAAGGAAGCTCTCGATTTGCTCAATTGCGTTACGGAGTCTCC
GTTTGATCAAGAGAAATGCTACAATCTCCTTCATTCTTTGAGAGAATGCGTGCTTAGCAAGAAAGTAAAAAAGTTCTCTCTGGCTGAGGAAGAACAAGTAAAACCAACTA
AGAAGAGCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATTGTTTTGCGATTCCTTGATAAACAAGCCGCTGCTCACTGGTTTTGAATTTCACCGAATTTTACGCCATGGATGAATCTCAAGCTCAAGCTCAATCTCAATCTCAAGAT
CAAGCTCAAGCTCAACCGGTTTGCGCTAAGGAAGCTCTCGATTTGCTCAATTGCGTTACGGAGTCTCCGTTTGATCAAGAGAAATGCTACAATCTCCTTCATTCTTTGAG
AGAATGCGTGCTTAGCAAGAAAGTAAAAAAGTTCTCTCTGGCTGAGGAAGAACAAGTAAAACCAACTAAGAAGAGCGCTTGAATGAAGCAATTTTGTGAAAGTAGGATAG
TTTCTAGTGTTATACAATTGAAGTTGGCCATATCTAGGAGGAGATAGTCTCTTTTAATGAACTGACTGAACTACTGAATTGTGCCCTTTTAATGATTTGGAAGTCTGAAT
TAAAGACTGTCTACTTAGTTATTTTTCAATTAGACCAATTTTTAGCCTTGAGAAAAATATCATCCAACATCTCAAGAAGTTTGTAGACATTTAATTTTCTTTATGGCAAC
TTTTTTTAACATTCGTGAATGTTTT
Protein sequenceShow/hide protein sequence
MDESQAQAQSQSQDQAQAQPVCAKEALDLLNCVTESPFDQEKCYNLLHSLRECVLSKKVKKFSLAEEEQVKPTKKSA