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Sed0001448 (gene) of Chayote v1 genome

Gene IDSed0001448
OrganismSechium edule (Chayote v1)
DescriptionDDE Tnp4 domain-containing protein
Genome locationLG06:2470449..2471256
RNA-Seq ExpressionSed0001448
SyntenySed0001448
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3433792.1 hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]6.4e-4753.44Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRK------------------IFL--------RIPNAR---KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCE
        MDE+DG++Y+K +KLLH DV                      IFL        +I + R   +  L+  HDYV+ELLNG+++RC+DCFRM K  F+ FCE
Subjt:  MDELDGETYAKVLKLLHGDVTWRK------------------IFL--------RIPNAR---KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCE

Query:  DLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRSKSKYFPFFK
        +LK+KTNLK SR+++VQE+VAIFLL I HNERNR+ AERFQHSG+TISR FN VLKKVC LGVE+IC  + D +  EIR   KY+PFFK
Subjt:  DLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRSKSKYFPFFK

KAF7123090.1 hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]7.3e-4345.93Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNAR-------------------------------------------------KRDLIYSHDYVIELLNGN
        MD+LD ++Y KVL+ LHGDV WR++F+ +P  R                                                 +  ++  HDYV+E+LNG+
Subjt:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNAR-------------------------------------------------KRDLIYSHDYVIELLNGN

Query:  DTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRS
        + RC   FRMK   F+AFCE LK   NLK SRYL++QE+V IFLL I HNERNR+  ERFQHSG TIS  F+ VLK VCKLGV II PP  D+IP +IR 
Subjt:  DTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRS

Query:  KSKYFPFFK
         +KYFPFFK
Subjt:  KSKYFPFFK

KAF7148819.1 hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]9.6e-4345.24Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNAR--------------------------------------------------KRDLIYSHDYVIELLNG
        MD+LD ++Y KVL+ LHGD+ WR++F+ +P  R                                                  +  ++  HDYV+E+LNG
Subjt:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNAR--------------------------------------------------KRDLIYSHDYVIELLNG

Query:  NDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIR
        ++ RC   FRMK   F+AFCE LK   NLK SRYL++QE+V IFLL I HNERNR+  ERFQHSG TIS  F+ VLK VCKLGV II PP  D+IP +IR
Subjt:  NDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIR

Query:  SKSKYFPFFK
          +KYFPFFK
Subjt:  SKSKYFPFFK

XP_028094390.1 uncharacterized protein LOC114294454 [Camellia sinensis]3.3e-3554.96Show/hide
Query:  PNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKV
        P   +  ++  HDYV+E+LNG++ R  + FRM+ D F+  CE LK    L+ SRYL+VQE+V IFLL I HNERNR+  ERFQHSGQTIS+ FN VLK V
Subjt:  PNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKV

Query:  CKLGVEIICPPDGDNIPQEIRSKSKYFPFFK
        C+LG ++I PPD D +P EIR   +++PFFK
Subjt:  CKLGVEIICPPDGDNIPQEIRSKSKYFPFFK

XP_028100667.1 uncharacterized protein LOC114300013 [Camellia sinensis]5.6e-3554.96Show/hide
Query:  PNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKV
        P   +  ++  HDYV+E+LNG++ R  + FRM+ D F+  CE LK    L+ SRYL+VQE+V IFLL I HNERNR+  ERFQHSGQTIS+ FN VLK V
Subjt:  PNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKV

Query:  CKLGVEIICPPDGDNIPQEIRSKSKYFPFFK
        C+LG ++I PPD D +P EIR   +++PFFK
Subjt:  CKLGVEIICPPDGDNIPQEIRSKSKYFPFFK

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ7 Uncharacterized protein1.5e-3852.25Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNL---------------------
        MD++DGE Y K+LKL HG                      HDYVIELLNGND+RCFDCFR ++ TFV FCEDLK+KTNL                     
Subjt:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNL---------------------

Query:  ----------------KASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD
                        KASRYL+VQEKVAIFLL+ISHNE NRI  ERFQHSG TIS  FN VL+KVCKLG+EII PP+
Subjt:  ----------------KASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD

A0A1S3E695 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like4.7e-2751.26Show/hide
Query:  DYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD
        ++V E+LNG++T CFD FRMKK+ F+ FC +L+ K  L  SR + V+EKVA FL +I HN R+R+A+ RFQHS +TISR F  VL+ VC+LG E+I   +
Subjt:  DYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD

Query:  GDNIPQEIRSKSKYFPFFK
           +P+ I++ SKY+P+FK
Subjt:  GDNIPQEIRSKSKYFPFFK

A0A2N9GND4 Uncharacterized protein3.6e-2748.84Show/hide
Query:  RKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKL
        +++D    H+Y++E+LNG D+ C++ FRM+K+ F++ C+ LK+   L+ SR++SVQEKVAIF+L I H+ RNR+  +RFQHSG+TISR FN VL  + KL
Subjt:  RKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKL

Query:  GVEIICPPDG-DNIPQEIRSKSKYFPFFK
          ++I P      IP  IR K KY+P+FK
Subjt:  GVEIICPPDG-DNIPQEIRSKSKYFPFFK

A0A3Q7Y331 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like4.7e-2751.26Show/hide
Query:  DYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD
        ++V E+LNG++T CFD FRMKK+ F+ FC +L+ K  L  SR + V+EKVA FL +I HN R+R+A+ RFQHS +TISR F  VL+ VC+LG E+I   +
Subjt:  DYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD

Query:  GDNIPQEIRSKSKYFPFFK
           +P+ I++ SKY+P+FK
Subjt:  GDNIPQEIRSKSKYFPFFK

A0A6A4KNZ4 Myb_DNA-bind_3 domain-containing protein (Fragment)3.8e-2948.61Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDL---------------IYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYL
        M++L  ++Y  VL+ LHGDV WR++FL +P  ++  L                  HDYV+E+LNG++ RC   FRMK   F+AFCE LK   NLK SRYL
Subjt:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDL---------------IYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYL

Query:  SVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKV
        ++QE+V IFLL I HNER+R+  E FQHSG TIS  F IV+  V
Subjt:  SVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein7.4e-0929.63Show/hide
Query:  CFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGD---NIPQEIRS
        C    RM    F   C  L+   +L+ +  +S++E VA+FL +  HNE  R    RF  + +T+ R F  VL     L  + I  P       IP+ ++ 
Subjt:  CFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGD---NIPQEIRS

Query:  KSKYFPFF
          +Y+P+F
Subjt:  KSKYFPFF

AT5G28730.1 unknown protein3.8e-1336.04Show/hide
Query:  NDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDN---IPQ
        N+  C    RM  + F   CE L  K  L++S  +S+ E VAIFL++ + N+  R  A RF H+ +TI R F+ VLK + +L VE I P   +    I  
Subjt:  NDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDN---IPQ

Query:  EIRSKSKYFPF
         ++  ++Y+PF
Subjt:  EIRSKSKYFPF

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.6e-1438.14Show/hide
Query:  YVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICP
        +V ++LNG + +CF+ FRM K  F   C+ L+ +  L+ +  + ++ ++AIFL +I HN R R   E F +SG+TISR FN VL  V  +  +   P
Subjt:  YVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAERFQHSGQTISRVFNIVLKKVCKLGVEIICP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAGATGTTACTTGGAGAAAGATATTTTTGCGCATACCCAATGCAAGGAAGAGAGATTT
GATTTATAGTCATGATTATGTGATTGAGTTATTGAATGGAAACGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGATACATTTGTAGCTTTTTGTGAAGATTTAA
AAGCGAAGACAAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGTTGCCATTTTTTTATTAGTCATATCACATAATGAAAGAAATCGTATAGCAGCTGAAAGG
TTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAAAAGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCCGACGGAGATAATATACCACA
AGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTCAAGGTAAGAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAGATGTTACTTGGAGAAAGATATTTTTGCGCATACCCAATGCAAGGAAGAGAGATTT
GATTTATAGTCATGATTATGTGATTGAGTTATTGAATGGAAACGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGATACATTTGTAGCTTTTTGTGAAGATTTAA
AAGCGAAGACAAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGTTGCCATTTTTTTATTAGTCATATCACATAATGAAAGAAATCGTATAGCAGCTGAAAGG
TTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAAAAGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCCGACGGAGATAATATACCACA
AGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTCAAGGTAAGAGCTTAA
Protein sequenceShow/hide protein sequence
MDELDGETYAKVLKLLHGDVTWRKIFLRIPNARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIAAER
FQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRSKSKYFPFFKVRA