| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004147619.1 30S ribosomal protein S1, chloroplastic [Cucumis sativus] | 1.2e-151 | 82.4 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
RF LKE+FE+AYERCRNAPVEGI FT++DFHAALEK DFDSE GTKVKGTVFCTD NGALVDITAKSSAYLP + EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
ENE+DDSL+LSLRSIQYDLAWER RQLQAEDVVVKGKVVD NKGGVVAVVEGL+G VPFSQ+STKS AEELL+KELPLKFVEVDEEQSRLVL
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVVTGTV+SLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIAQAEA+ARAD+LRFQ ESGLTLTTDGILGPIT ELPVEGLDLNDVPPAEE
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| XP_008438974.1 PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo] | 8.4e-153 | 82.96 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
RF LKE+FE+AYERCRNAPVEGI FT++DFHAALEK DFDSE GTKVKGTVFCTD NGALVDITAKSSAYLP + EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
ENE+DDSL+LSLRSIQYDLAWER RQLQAEDVVVKGKVVD NKGGVVAVVEGL+G VPFSQ+STKSTAEELLNKELPLKFVEVDEEQSRLVL
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVVTGTV+SLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIAQAEA+ARAD+LRFQ ESGLTLTTDGILGPIT ELPVEGLDLNDVPPAEE
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| XP_022138241.1 30S ribosomal protein S1, chloroplastic [Momordica charantia] | 4.4e-154 | 84.08 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
RF LKE+FEDAYERCRNAPVEGI FT++DFHAALEK DFDSE GTKVKGTVFCTDANGALVDITAKSSAYLP V EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
ENEADDSLVLSLRSIQYDLAWER RQLQAEDVVVKGKVVD NKGGVVAVVEGL+G VPFSQ+S+KSTAEELLNKELPLKFVEVDEEQSRLVL
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVVTGTV+SLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIAQAEAMARAD+LRFQ ESGLTLTTDGILGPIT ELPVEGLDL+DVPPAEE
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| XP_022935757.1 30S ribosomal protein S1, chloroplastic-like [Cucurbita moschata] | 3.9e-150 | 81.84 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
RF LKEIFE+AYERCRNAPVEGI FTV+DFH+A+EK DF+SE GTKVKGTVFCTDANGALVDITAKSSAYLP + EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
ENEADDSLVLSLRSIQYDLAWER RQLQAEDVVVKGKVVD NKGGVVAVVEGL+G VPFSQ+STKSTAEELL KE+PLKFVEVDEEQSRLVL
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVV GTV+SLKPYGAFIDIGG+NGLLHVSQISHDRISDIATVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIA AEAMARAD+L+FQ ESGLTLTTDGILGP+T ELPVEGLDLNDVPPAEE
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| XP_038878013.1 30S ribosomal protein S1, chloroplastic-like [Benincasa hispida] | 6.4e-153 | 83.24 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV--------------------IGEFVVI
RF LKE+FE+AYERCRNAPVEGI FT++DFHAALEK DFDSE GTKVKGTVFCTD NGALVDITAKSSAYLPV EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV--------------------IGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
ENEADDSL+LSLRSIQYDLAWER RQLQAEDVVVKGKVVD NKGGVVAVVEGL+G VPFSQ+S+KSTAEELLNKELPLKFVEVDEEQSRLVL
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVVTGTV+SLKPYGAFIDIGGINGLLHVSQISHDRISDI TVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIAQAEAMARAD+LRFQ ESGLTLTTDGILGPIT ELPVEGLDLNDVPPAEE
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3AXL6 30S ribosomal protein S1, chloroplastic | 4.1e-153 | 82.96 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
RF LKE+FE+AYERCRNAPVEGI FT++DFHAALEK DFDSE GTKVKGTVFCTD NGALVDITAKSSAYLP + EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
ENE+DDSL+LSLRSIQYDLAWER RQLQAEDVVVKGKVVD NKGGVVAVVEGL+G VPFSQ+STKSTAEELLNKELPLKFVEVDEEQSRLVL
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVVTGTV+SLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIAQAEA+ARAD+LRFQ ESGLTLTTDGILGPIT ELPVEGLDLNDVPPAEE
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| A0A200R1Z5 Ribosomal protein S1 | 8.2e-146 | 78.21 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV--------------------IGEFVVI
R LK++FE+AYERCR P+EG+ FTV DFHAALEK D++SE GT+VKGTVFCTD NGALVDITAKSSAYLPV EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV--------------------IGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
EN+ADDSL+LSLRSIQYDLAWER RQLQAEDVVVKGK+V GNKGGVVA+VEGL+G VPFSQ+STKSTAEEL++KELPLKFVEVDEEQSRLVL
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVVTGTV+SLKPYGAFIDIGGINGLLHVSQISHDR+SDIATVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIAQAEAMARAD+LRFQ ESGLTL++DGILGP+T +LPVEGLDL+D+PPAEE
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| A0A5A7UEP7 30S ribosomal protein S1 | 6.1e-149 | 77.55 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTK-------------------------VKGTVFCTDANGALVDITAKSSAYLP---
RF LKE+FE+AYERCRNAPVEGI FT++DFHAALEK DFDSE GTK VKGTVFCTD NGALVDITAKSSAYLP
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTK-------------------------VKGTVFCTDANGALVDITAKSSAYLP---
Query: -----------------VIGEFVVIVENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNK
+ EFV+I ENE+DDSL+LSLRSIQYDLAWER RQLQAEDVVVKGKVVD NKGGVVAVVEGL+G VPFSQ+STKSTAEELLNK
Subjt: -----------------VIGEFVVIVENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNK
Query: ELPLKFVEVDEEQSRLVL----------AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLS
ELPLKFVEVDEEQSRLVL AQLGIGSVVTGTV+SLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG VMILSHDRERGRVSLS
Subjt: ELPLKFVEVDEEQSRLVL----------AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLS
Query: TKKLEPTPGDMIRNPKLVFERAEEMAQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
TKKLEPTPGDMIRNPKLVFE+AEEMAQTFRQRIAQAEA+ARAD+LRFQ ESGLTLTTDGILGPIT ELPVEGLDLNDVPPAEE
Subjt: TKKLEPTPGDMIRNPKLVFERAEEMAQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| A0A6J1F6H4 30S ribosomal protein S1, chloroplastic-like | 1.9e-150 | 81.84 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
RF LKEIFE+AYERCRNAPVEGI FTV+DFH+A+EK DF+SE GTKVKGTVFCTDANGALVDITAKSSAYLP + EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
ENEADDSLVLSLRSIQYDLAWER RQLQAEDVVVKGKVVD NKGGVVAVVEGL+G VPFSQ+STKSTAEELL KE+PLKFVEVDEEQSRLVL
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVV GTV+SLKPYGAFIDIGG+NGLLHVSQISHDRISDIATVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIA AEAMARAD+L+FQ ESGLTLTTDGILGP+T ELPVEGLDLNDVPPAEE
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| A0A6J1IAT2 30S ribosomal protein S1, chloroplastic | 4.2e-150 | 81.56 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
RF LKEIFE+AYERCRNAPVEGI FTV+DFH+A+EK DF+SE GTKVKGTVFCTD+NGALVDITAKSSAYLP + EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
ENEADDSLVLSLRSIQYDLAWER RQLQAEDVVVKGKVVD NKGGVVAVVEGL+G VPFSQ+STKSTAEELL KE+PLKFVEVDEEQSRLVL
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVV GTV+SLKPYGAFIDIGG+NGLLHVSQISHDRISDIATVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIA AEAMARAD+L+FQ ESGLTLTTDGILGP+T ELPVEGLDLNDVPPAEE
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O33698 30S ribosomal protein S1 | 1.3e-34 | 33.21 | Show/hide |
Query: DFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------VIG-----------EFVVIVENEADDSLVLSLRSIQYDLAWERVRQLQ
DF ALE DS+ G V+G V +GA +DI K+ A+LP V+ EF+VI + D + +SLR++ + AW RV +LQ
Subjt: DFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------VIG-----------EFVVIVENEADDSLVLSLRSIQYDLAWERVRQLQ
Query: AEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVLA-----------QLGIGSVVTGTVRSLKPYGAFIDI
V+ KV NKGGV A +EGL+ +P S L+ K + L K L + F+EV+ +LVL+ ++ +G ++ G V LKP+G F+D+
Subjt: AEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVLA-----------QLGIGSVVTGTVRSLKPYGAFIDI
Query: GGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEMAQTFRQRI
GG LL ++QIS ++D+ + + G ++++ D +GR+SLSTK LE PG+++ N + A + A+ R+++
Subjt: GGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEMAQTFRQRI
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| P29344 30S ribosomal protein S1, chloroplastic | 3.9e-145 | 76.54 | Show/hide |
Query: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
R LK++FEDAYERCRNAP+EG+ FT+ DFH AL+K DF+SE G++VKGTVFCTDANGALVDITAKSSAYLP V EFV+I
Subjt: RFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLP--------------------VIGEFVVI
Query: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
ENEADDSL+LSLR IQY+LAWER RQLQAEDVVVKGK+V NKGGVVA+VEGL+G VPFSQ+S+KS+AEELL KE+PLKFVEVDEEQSRLV+
Subjt: VENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL-------
Query: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
AQLGIGSVVTGTV+SLKPYGAFIDIGGINGLLHVSQISHDR+SDIATVLQPG VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE+AEEM
Subjt: ---AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
AQTFRQRIAQAEAMARAD+LRFQ ESGLTL++DGILGP+T++LP EGLDL+ VPPA E
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDLNDVPPAEE
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| P46228 30S ribosomal protein S1 | 1.8e-65 | 46.1 | Show/hide |
Query: RNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV-------------------IGEFVVIVENEADDSLVLSLRSI
++ P I FT +DF A L++ D+ G V GTVF + GAL+DI AK++A+LPV + EF ++ + D L LS+R I
Subjt: RNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV-------------------IGEFVVIVENEADDSLVLSLRSI
Query: QYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVLA-----------QLGIGSVVTGT
+Y AWERVRQLQ ED V+ +V N+GG + +EGL+G +P S +ST+ E+L+ +ELPLKF+EVDE+++RLVL+ +L +G VV G
Subjt: QYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVLA-----------QLGIGSVVTGT
Query: VRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVL----QPGVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEMAQTFRQRIAQ
VR +KPYGAFIDIGG++GLLH+S+ISHD I +V + VMI+ D ERGR+SLSTK+LEP PGDM+RNP++V+E+AEEMA +R+++ Q
Subjt: VRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVL----QPGVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEMAQTFRQRIAQ
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| P73530 30S ribosomal protein S1 homolog A | 9.2e-62 | 45.73 | Show/hide |
Query: IFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV-------------------IGEFVVIVENEADDSLVLSLRSIQYDLAWE
I FT++DF A L+K D+ G V GTVF ++ GAL+DI AK++AY+P+ EF ++ + D L LS+R I+Y AWE
Subjt: IFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV-------------------IGEFVVIVENEADDSLVLSLRSIQYDLAWE
Query: RVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVLAQ-----------LGIGSVVTGTVRSLKPY
RVRQLQAED V+ V N+GG + +EGL+G +P S +S + E+L+ ++LPLKF+EVDEE++RLVL+ L + VV G+VR +KPY
Subjt: RVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVLAQ-----------LGIGSVVTGTVRSLKPY
Query: GAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEMAQTFRQ-RIAQAEAM
GAFIDIGG++GLLH+S+ISHD I +V VMI+ D ERGR+SLSTK+LEP PG M+++ LV E A+EMA+ FRQ R+A+A+ +
Subjt: GAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEMAQTFRQ-RIAQAEAM
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| Q93VC7 30S ribosomal protein S1, chloroplastic | 1.4e-134 | 71.07 | Show/hide |
Query: GPFTSRFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV--------------------IG
G R LK++FEDAYERCR +P+EG+ FTV DF AA+E+ DF+SE GT+VKGTVF TDANGALVDI+AKSSAYL V +
Subjt: GPFTSRFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV--------------------IG
Query: EFVVIVENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL--
EFV+I ENE+DDSL+LSLR+IQY+LAWER RQLQAEDV+VK KV+ NKGG+VA+VEGL+G VPFSQ+S+K+ AEELL KE+PLKFVEVDEEQ++LVL
Subjt: EFVVIVENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL--
Query: --------AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE
AQLGIGSVV G V+SLKPYGAFIDIGGINGLLHVSQISHDR+SDIATVLQPG VMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFE
Subjt: --------AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE
Query: RAEEMAQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDL--NDVPPA
+AEEMAQTFRQRIAQAEAMARAD+LRFQ ESGLTL++DGILGP+ +ELP +G+DL +D+P A
Subjt: RAEEMAQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDL--NDVPPA
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G71720.1 Nucleic acid-binding proteins superfamily | 3.8e-18 | 29.7 | Show/hide |
Query: VLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQL----STKSTAEELLNKELPLKFVEVDEEQSRLVLAQ--------LG
+LS R +AW RVRQ++ + ++ K+ + N GG++ +EGL+ +P +L +T + +E + + ++ ++E+++ L+L++ L
Subjt: VLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQL----STKSTAEELLNKELPLKFVEVDEEQSRLVLAQ--------LG
Query: IGSVVTGTVRSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPG---VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEMAQTFRQ
G+++ GTV + PYGA + +G +GLLH+S I+ RI ++ VLQ +++ ++SLS LE PG I + + VF AEEMA+ +R+
Subjt: IGSVVTGTVRSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPG---VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEMAQTFRQ
Query: RI
++
Subjt: RI
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| AT3G11964.1 RNA binding;RNA binding | 3.5e-08 | 29.03 | Show/hide |
Query: LAQLGIGSVVTGTVRSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
L +L +G +++G +R ++P+G FIDI G+ GL H+SQ+S DR+ ++ + G IL D E+ R+SL K GD + L +
Subjt: LAQLGIGSVVTGTVRSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFERAEEM
Query: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITT--ELPVEGLDLNDV
++E +A D FQ SG T +L + + +P +DL+D+
Subjt: AQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITT--ELPVEGLDLNDV
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| AT3G23700.1 Nucleic acid-binding proteins superfamily | 4.6e-16 | 30 | Show/hide |
Query: WERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEE-----------LLNKELPLKFVEVDEEQSRLVLAQ-----------LGIG
W+ + +G+V N GG++ L G +P+ QLS + +E L+ +LP+K V+ DEE +L+L++ + +G
Subjt: WERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEE-----------LLNKELPLKFVEVDEEQSRLVLAQ-----------LGIG
Query: SVVTGTVRSLKPYGAFIDIG------GINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTP
V G V S++ YGAFI + + GL+HVS++S D + D+ VL+ G V++ + D+E+ R++LS K+LE P
Subjt: SVVTGTVRSLKPYGAFIDIG------GINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTP
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| AT5G14580.1 polyribonucleotide nucleotidyltransferase, putative | 4.9e-10 | 39.56 | Show/hide |
Query: EVDEEQSRLVLAQLGIGSVVTGTVRSLKPYGAFIDI-GGINGLLHVSQISHDRISDIATVLQPGVMILSHDRE---RGRVSLSTKKLEPTP
+ E+ ++ +L +G V GTV S+K YGAF++ GG GLLH+S++SH+ +S ++ VL G I + E RG + LS K L P P
Subjt: EVDEEQSRLVLAQLGIGSVVTGTVRSLKPYGAFIDI-GGINGLLHVSQISHDRISDIATVLQPGVMILSHDRE---RGRVSLSTKKLEPTP
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| AT5G30510.1 ribosomal protein S1 | 9.9e-136 | 71.07 | Show/hide |
Query: GPFTSRFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV--------------------IG
G R LK++FEDAYERCR +P+EG+ FTV DF AA+E+ DF+SE GT+VKGTVF TDANGALVDI+AKSSAYL V +
Subjt: GPFTSRFNLKEIFEDAYERCRNAPVEGIFFTVQDFHAALEKCDFDSEFGTKVKGTVFCTDANGALVDITAKSSAYLPV--------------------IG
Query: EFVVIVENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL--
EFV+I ENE+DDSL+LSLR+IQY+LAWER RQLQAEDV+VK KV+ NKGG+VA+VEGL+G VPFSQ+S+K+ AEELL KE+PLKFVEVDEEQ++LVL
Subjt: EFVVIVENEADDSLVLSLRSIQYDLAWERVRQLQAEDVVVKGKVVDGNKGGVVAVVEGLKGLVPFSQLSTKSTAEELLNKELPLKFVEVDEEQSRLVL--
Query: --------AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE
AQLGIGSVV G V+SLKPYGAFIDIGGINGLLHVSQISHDR+SDIATVLQPG VMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFE
Subjt: --------AQLGIGSVVTGTVRSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPG----VMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFE
Query: RAEEMAQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDL--NDVPPA
+AEEMAQTFRQRIAQAEAMARAD+LRFQ ESGLTL++DGILGP+ +ELP +G+DL +D+P A
Subjt: RAEEMAQTFRQRIAQAEAMARADVLRFQLESGLTLTTDGILGPITTELPVEGLDL--NDVPPA
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