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Sed0001460 (gene) of Chayote v1 genome

Gene IDSed0001460
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationContig00297:89935..90481
RNA-Seq ExpressionSed0001460
SyntenySed0001460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7013176.1 unnamed protein product [Microthlaspi erraticum]1.8e-3568.33Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN
        MDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRG                                 L  DPSSMGHVES VN
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN

Query:  QQGPPCKAKYSWVTDSEVVP
        QQGPPCKAKYSWVTDSEVVP
Subjt:  QQGPPCKAKYSWVTDSEVVP

CAF1728876.1 unnamed protein product [Brassica napus]8.7e-3567.5Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN
        MDVDKI PFSSTLGWHSLKVK EVQT+KGLRWIPRHPETRKGVVSDEMLRG                                 L  DPSSMGHVES VN
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN

Query:  QQGPPCKAKYSWVTDSEVVP
        QQGPPCKAKYSWVTDSEVVP
Subjt:  QQGPPCKAKYSWVTDSEVVP

CAF1751020.1 unnamed protein product [Brassica napus]8.7e-3567.5Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN
        MDVDKI PFSSTLGWHSLKVK EVQT+KGLRWIPRHPETRKGVVSDEMLRG                                 L  DPSSMGHVES VN
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN

Query:  QQGPPCKAKYSWVTDSEVVP
        QQGPPCKAKYSWVTDSEVVP
Subjt:  QQGPPCKAKYSWVTDSEVVP

CAF4958888.1 unnamed protein product [Pieris macdunnoughi]1.8e-3568.33Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN
        MDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRG                                 L  DPSSMGHVES VN
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN

Query:  QQGPPCKAKYSWVTDSEVVP
        QQGPPCKAKYSWVTDSEVVP
Subjt:  QQGPPCKAKYSWVTDSEVVP

KAD0832391.1 hypothetical protein E3N88_43649 [Mikania micrantha]1.9e-3466.67Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN
        MDVDKI PFSSTLGWHSLK+KGEVQT+KGLRWIPRHPETRKGVVSDEMLRG                                 L  DPSSMGHVES VN
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN

Query:  QQGPPCKAKYSWVTDSEVVP
        QQGPPCKAKYSWVTD+EVVP
Subjt:  QQGPPCKAKYSWVTDSEVVP

TrEMBL top hitse value%identityAlignment
A0A445C644 Uncharacterized protein3.3e-3261.07Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG--------------------------------------------LTPDP
        MDVDKILP SSTLGWHSL+VKGEVQT+KGL WIPRHPETRKGVVSDEMLRG                                            L  DP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG--------------------------------------------LTPDP

Query:  SSMGHVESCVNQQGPPCKAKYSWVTDSEVVP
        SSMGHVES VNQQGPPCKAKYSWVTDSEVVP
Subjt:  SSMGHVESCVNQQGPPCKAKYSWVTDSEVVP

A0A445C6D4 Uncharacterized protein1.2e-3261.07Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG--------------------------------------------LTPDP
        MDVDKILP SSTLGWHSL+VKGEVQT+KGL WIPRHPETRKGVVSDEMLRG                                            L  DP
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG--------------------------------------------LTPDP

Query:  SSMGHVESCVNQQGPPCKAKYSWVTDSEVVP
        SSMGHVES VNQQGPPCKAKYSWVTDSEVVP
Subjt:  SSMGHVESCVNQQGPPCKAKYSWVTDSEVVP

A0A5N6MLP8 Uncharacterized protein ycf686.1e-3466.39Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN
        MDVDKI PFSSTLGWHSLK+KGEVQT+KGLRWIPRHPETRKGVVSDEMLRG                                 L  DPSSMGHVES VN
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN

Query:  QQGPPCKAKYSWVTDSEVV
        QQGPPCKAKYSWVTDSE V
Subjt:  QQGPPCKAKYSWVTDSEVV

A0A5N6P9A0 Uncharacterized protein9.4e-3566.67Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN
        MDVDKI PFSSTLGWHSLK+KGEVQT+KGLRWIPRHPETRKGVVSDEMLRG                                 L  DPSSMGHVES VN
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN

Query:  QQGPPCKAKYSWVTDSEVVP
        QQGPPCKAKYSWVTD+EVVP
Subjt:  QQGPPCKAKYSWVTDSEVVP

A0A6D2I321 Uncharacterized protein ycf688.5e-3668.33Show/hide
Query:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN
        MDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRG                                 L  DPSSMGHVES VN
Subjt:  MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRG---------------------------------LTPDPSSMGHVESCVN

Query:  QQGPPCKAKYSWVTDSEVVP
        QQGPPCKAKYSWVTDSEVVP
Subjt:  QQGPPCKAKYSWVTDSEVVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCC
AGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGACTTACGCCTGACCCGAGTAGCATGGGGCACGTGGAATCCTGTGTGAATCAGCAAGGACCACCTTGCA
AGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCC
AGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGACTTACGCCTGACCCGAGTAGCATGGGGCACGTGGAATCCTGTGTGAATCAGCAAGGACCACCTTGCA
AGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA
Protein sequenceShow/hide protein sequence
MDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGLTPDPSSMGHVESCVNQQGPPCKAKYSWVTDSEVVP