; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001472 (gene) of Chayote v1 genome

Gene IDSed0001472
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG13:4472339..4477633
RNA-Seq ExpressionSed0001472
SyntenySed0001472
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5445531.1 hypothetical protein F2P56_034577 [Juglans regia]4.0e-2130.1Show/hide
Query:  EFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFD
        E +++    +++ DEE  C IE      DS  +    S+  K++  R    E+ R +M + W +   +E +  G N F   F NR +K + ++G PW FD
Subjt:  EFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFD

Query:  KGLIVL-------------------------RTLLEMNDQDMEFRLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVA
          L VL                           L  MN Q  E  LIG+ +G   +VDV  +G   G  LRVK+  D++KP+ RG  I V   +   WV 
Subjt:  KGLIVL-------------------------RTLLEMNDQDMEFRLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVA

Query:  FAYEKLPEICYGCGQCGDGEELGLKNNFSSKQKEGGVNTAPNSSHPRQVAIEDYFGGGRGRGRG-----------------HQEEGRAR
        F YEKLP +C+ CG+   G++ G K +  S  + G    A   +    V + +  GGGRG  RG                 +QEEGR +
Subjt:  FAYEKLPEICYGCGQCGDGEELGLKNNFSSKQKEGGVNTAPNSSHPRQVAIEDYFGGGRGRGRG-----------------HQEEGRAR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.1e-2632.2Show/hide
Query:  RITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVL-RTL
        ++T EE    ++   + +  A +GL  S+  KL+  R  +A++  R++   W +++ + +ES G+N+F  HF    +  + M+ GPWFFDK LIVL +  
Subjt:  RITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVL-RTL

Query:  LEMNDQDMEFRLI----------------------GNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICYG
           N  ++EF  +                      GN IG F+DVD +  G   G  LR++++IDI KPL+RG+ I +       W+   YE+LP+ CY 
Subjt:  LEMNDQDMEFRLI----------------------GNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICYG

Query:  CGQCG
        CG  G
Subjt:  CGQCG

XP_035546596.1 uncharacterized protein LOC118348645 [Juglans regia]2.4e-2132.24Show/hide
Query:  MAEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWF
        M E I     ++++T+EE+       + EI  ++    + +   +  +R  N   F+  M R W+ +  +  +  GRN F   F N   + + + G PW 
Subjt:  MAEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWF

Query:  FDKGLIVLRTL---LEMND------------QDMEF--------RLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVA
        FD+ LI ++     L + D            QD+ F          +G   G  + VDVD  GR  G VLRVK+MID+ KPL RG +I VG  R  +W+ 
Subjt:  FDKGLIVLRTL---LEMND------------QDMEF--------RLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVA

Query:  FAYEKLPEICYGCG
        F YEKLP  CY CG
Subjt:  FAYEKLPEICYGCG

XP_042969110.1 uncharacterized protein LOC122301800 [Carya illinoinensis]5.2e-2128.71Show/hide
Query:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVLRTL
        +++T++E+   +   +  + S N+     ++C +M +R  N    +  + R W ++    I+  GRN F    +N  +K++ M+G PW FDK L+ ++  
Subjt:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVLRTL

Query:  LEMN---------------DQDMEF--------RLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICY
           N                 D+ F          IG+ +G  L VD D++G C G  LR+K+M+D+ KPL RG  + +G  +   W++F YE+LP  CY
Subjt:  LEMN---------------DQDMEF--------RLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICY

Query:  GCGQCGDGE
         CG+    E
Subjt:  GCGQCGDGE

XP_042983333.1 uncharacterized protein LOC122312736 [Carya illinoinensis]6.2e-2229.19Show/hide
Query:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVLRTL
        +++T++E+   +   D  + S N+     ++C +M +R  N    +  + R W ++    I+  GRN F    +N  +K++ M+G PW FDK L+ ++  
Subjt:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVLRTL

Query:  LEMN---------------DQDMEF--------RLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICY
           N                 D+ F          IG+ +G  L VD D++G C G  LR+K+M+D+ KPL RG  + +G  +   W++F YE+LP  CY
Subjt:  LEMN---------------DQDMEF--------RLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICY

Query:  GCGQCGDGE
         CG+    E
Subjt:  GCGQCGDGE

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein9.6e-2130.48Show/hide
Query:  DSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVLRTLLEMND-QDMEFRLI-----
        +   + L  S+  K + N+  N E F+  +   W   N V +E  G NIF+  F+N  ++++ +EGGPW FDK L+VLR         D++FR +     
Subjt:  DSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVLRTLLEMND-QDMEFRLI-----

Query:  -----------------GNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICYGCGQCG
                         G  +G   ++D   +G C G  +R++++ID+  PLKRG+ + +G   +   V   YE+LP  CY CG+ G
Subjt:  -----------------GNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICYGCGQCG

A0A5E4G034 PREDICTED: DUF4283 domain-containing2.1e-2029.95Show/hide
Query:  MAEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWF
        M E I      + +T++E+   I+   N+ID     L+ S+  K++   + N E F++ M + W     V ++  G N+F   F    ++ + +  GPW 
Subjt:  MAEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWF

Query:  FDKGLIVLRT----------LLEMNDQDMEF-------------RLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVA
        FDK L++L T          LL+  D  ++              R IGN  G  LDV    +G+C G  LR+++ +D+ KPL+RG  + + S     +V 
Subjt:  FDKGLIVLRT----------LLEMNDQDMEF-------------RLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVA

Query:  FAYEKLPEICYGCGQCG
        F YE+LPE C+ CG+ G
Subjt:  FAYEKLPEICYGCGQCG

A0A6J1BSZ1 uncharacterized protein LOC1110054815.7e-2127.44Show/hide
Query:  AEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLD-NNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWF
        A  + ++  N ++T EE    ++   + ++   + L  S+ CKL+  RS +  + +  +   W LD     ++  G NIF  +F    ++ + +  GPW 
Subjt:  AEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLD-NNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWF

Query:  FDKGLIVLRTLLEMNDQ-DMEFR----------------------LIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVA
        FD+ LI++   + +    DM+FR                       +GN IG F DV+ +AN  C G+ LRV++  D+ KPL RG+ + +       W+ 
Subjt:  FDKGLIVLRTLLEMNDQ-DMEFR----------------------LIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVA

Query:  FAYEKLPEICYGCGQ
          YE+LP+  Y CG+
Subjt:  FAYEKLPEICYGCGQ

A0A6J1DU55 uncharacterized protein LOC1110231353.4e-2632.2Show/hide
Query:  RITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVL-RTL
        ++T EE    ++   + +  A +GL  S+  KL+  R  +A++  R++   W +++ + +ES G+N+F  HF    +  + M+ GPWFFDK LIVL +  
Subjt:  RITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVL-RTL

Query:  LEMNDQDMEFRLI----------------------GNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICYG
           N  ++EF  +                      GN IG F+DVD +  G   G  LR++++IDI KPL+RG+ I +       W+   YE+LP+ CY 
Subjt:  LEMNDQDMEFRLI----------------------GNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICYG

Query:  CGQCG
        CG  G
Subjt:  CGQCG

A0A803MW53 Uncharacterized protein5.1e-2230.45Show/hide
Query:  MAEFIQDQMGNMRITDEEKSCRIEFGDNEI----DSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEG
        M E +      +++TDEE    + FG +++    + +N  +  S+  KL+  +S N E  +R++   W +D+NV I     NIF   F N D++++ +EG
Subjt:  MAEFIQDQMGNMRITDEEKSCRIEFGDNEI----DSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEG

Query:  GPWFFDKGLIVLRTLLEMNDQ---------------DMEFRL--------IGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMRED
         PW FD  +++L+ +                     D+ F +        IGN IG  +DVD +++  C    +RVK+M++I KPL+RGM I V    ED
Subjt:  GPWFFDKGLIVLRTLLEMNDQ---------------DMEFRL--------IGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMRED

Query:  A---WVAFAYEKLPEICYGCGQCGDGEELGLKNNFSSKQKEGG
            W+ F YE+L + CY CG+ G  ++         +QK+GG
Subjt:  A---WVAFAYEKLPEICYGCGQCGDGEELGLKNNFSSKQKEGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGTTCATTCAAGATCAGATGGGTAATATGAGAATTACAGATGAAGAAAAAAGTTGCAGGATCGAATTTGGGGACAACGAAATTGATTCGGCAAATAGAGGTCT
AAGAAATTCGGTTTATTGCAAGTTAATGGTGAATAGATCGACGAACGCAGAAATATTTCGAAGACTCATGCCTCGAAAATGGGATCTGGATAACAATGTGGAAATAGAAT
CATGGGGAAGAAATATTTTTCAATGCCACTTTAGAAACAGAGATGAAAAGCAACAAACAATGGAAGGTGGTCCTTGGTTTTTCGATAAGGGGTTAATAGTTTTGAGGACT
CTGTTGGAGATGAACGACCAAGATATGGAGTTTAGGTTAATAGGGAATAAAATTGGCGGTTTCCTAGACGTGGATGTTGATGCTAATGGAAGATGCAGAGGAAATGTTCT
TAGAGTAAAAATTATGATTGATATTCAGAAGCCATTGAAGAGAGGTATGCTTATCAAGGTGGGATCTATGCGTGAGGATGCTTGGGTAGCCTTTGCTTATGAAAAATTAC
CGGAAATATGTTATGGTTGTGGTCAGTGTGGCGATGGGGAAGAGTTAGGGTTAAAAAACAACTTCTCTTCAAAGCAAAAGGAAGGGGGAGTGAATACAGCTCCGAACAGC
AGTCACCCAAGACAAGTCGCCATAGAAGATTACTTCGGGGGAGGAAGAGGGAGAGGGAGGGGTCATCAAGAGGAGGGTCGGGCCCGAGGGGGTCAGAGTAGAAAAAGCAA
TTCAAATTTAGTGGAAGAGCTCCATGTTCATTCAGAGCAAGGTGGCGAGCATTCGCCATTTTCGAAGAAAGAAGTTGGAAGTTTTCAGTCGGATTTTGCTAATCGGAAGG
GGAAAGCGGTGATCGGAGGGGAAGGGATCGATTTCCAACGGTCAACTACTGAGAAGGCGGTTCAGTCGAGGCAGCAGAGTCGTATGATTGAGACGATGCAGGGGCTGAGT
TCTGATGTATTGGCAGAAATTAGGGAAGATAGGTCAGAAAAAGTTAAAAAGCAGGTGGTGAATTCAGGTTTAGGGGAGGTTTTGGGCTTCGTGGAGTCAGGGGTTTCAAT
TGGGCCAGAACTGGTGGAACAGTTGGAAAAAGAAAAGAAAGTGGCTAGTGGGCTTGAGTCAACAGTTGGGCTTGATAAAAAGTGGGAAGTGGGGGAAGGAATTCATTTAG
TGGCCAACATTGATTGTTCAAAAAAAATCCTTCTGCCAGATCAAAATGGGTTGGAAAAAAAAGAAAATTCCTGTAATTTAGGCCATGAGTTTTGGAAAATTTCTGGAATT
AAAATGCCAGCACAAATTGGTTTAGAGGAGAAAGGAAAAAATCTAGCTGATGAGTTTTTTGAAAATGGAAAAGGGTCGAAGGATAATTTTAAAGAGAATGGGTCGGTTGC
CCTTAGTGCCAAGGACCCTTGGAAAGAGGTGAAAGTTGCGAATATTATTGGTGAAGGGAATAAGTGGGACACGAAGCTAATTAAGTCAATTTTTTCTAGGGAAGAAGCTA
ATGCTATTTGTGGCATTCCGTTGGGGTCCCTCGAAAGGAGAATTGTTTTGGCAGGGGATCTGTGCCAAGATTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGTTCATTCAAGATCAGATGGGTAATATGAGAATTACAGATGAAGAAAAAAGTTGCAGGATCGAATTTGGGGACAACGAAATTGATTCGGCAAATAGAGGTCT
AAGAAATTCGGTTTATTGCAAGTTAATGGTGAATAGATCGACGAACGCAGAAATATTTCGAAGACTCATGCCTCGAAAATGGGATCTGGATAACAATGTGGAAATAGAAT
CATGGGGAAGAAATATTTTTCAATGCCACTTTAGAAACAGAGATGAAAAGCAACAAACAATGGAAGGTGGTCCTTGGTTTTTCGATAAGGGGTTAATAGTTTTGAGGACT
CTGTTGGAGATGAACGACCAAGATATGGAGTTTAGGTTAATAGGGAATAAAATTGGCGGTTTCCTAGACGTGGATGTTGATGCTAATGGAAGATGCAGAGGAAATGTTCT
TAGAGTAAAAATTATGATTGATATTCAGAAGCCATTGAAGAGAGGTATGCTTATCAAGGTGGGATCTATGCGTGAGGATGCTTGGGTAGCCTTTGCTTATGAAAAATTAC
CGGAAATATGTTATGGTTGTGGTCAGTGTGGCGATGGGGAAGAGTTAGGGTTAAAAAACAACTTCTCTTCAAAGCAAAAGGAAGGGGGAGTGAATACAGCTCCGAACAGC
AGTCACCCAAGACAAGTCGCCATAGAAGATTACTTCGGGGGAGGAAGAGGGAGAGGGAGGGGTCATCAAGAGGAGGGTCGGGCCCGAGGGGGTCAGAGTAGAAAAAGCAA
TTCAAATTTAGTGGAAGAGCTCCATGTTCATTCAGAGCAAGGTGGCGAGCATTCGCCATTTTCGAAGAAAGAAGTTGGAAGTTTTCAGTCGGATTTTGCTAATCGGAAGG
GGAAAGCGGTGATCGGAGGGGAAGGGATCGATTTCCAACGGTCAACTACTGAGAAGGCGGTTCAGTCGAGGCAGCAGAGTCGTATGATTGAGACGATGCAGGGGCTGAGT
TCTGATGTATTGGCAGAAATTAGGGAAGATAGGTCAGAAAAAGTTAAAAAGCAGGTGGTGAATTCAGGTTTAGGGGAGGTTTTGGGCTTCGTGGAGTCAGGGGTTTCAAT
TGGGCCAGAACTGGTGGAACAGTTGGAAAAAGAAAAGAAAGTGGCTAGTGGGCTTGAGTCAACAGTTGGGCTTGATAAAAAGTGGGAAGTGGGGGAAGGAATTCATTTAG
TGGCCAACATTGATTGTTCAAAAAAAATCCTTCTGCCAGATCAAAATGGGTTGGAAAAAAAAGAAAATTCCTGTAATTTAGGCCATGAGTTTTGGAAAATTTCTGGAATT
AAAATGCCAGCACAAATTGGTTTAGAGGAGAAAGGAAAAAATCTAGCTGATGAGTTTTTTGAAAATGGAAAAGGGTCGAAGGATAATTTTAAAGAGAATGGGTCGGTTGC
CCTTAGTGCCAAGGACCCTTGGAAAGAGGTGAAAGTTGCGAATATTATTGGTGAAGGGAATAAGTGGGACACGAAGCTAATTAAGTCAATTTTTTCTAGGGAAGAAGCTA
ATGCTATTTGTGGCATTCCGTTGGGGTCCCTCGAAAGGAGAATTGTTTTGGCAGGGGATCTGTGCCAAGATTCCTAG
Protein sequenceShow/hide protein sequence
MAEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVLRT
LLEMNDQDMEFRLIGNKIGGFLDVDVDANGRCRGNVLRVKIMIDIQKPLKRGMLIKVGSMREDAWVAFAYEKLPEICYGCGQCGDGEELGLKNNFSSKQKEGGVNTAPNS
SHPRQVAIEDYFGGGRGRGRGHQEEGRARGGQSRKSNSNLVEELHVHSEQGGEHSPFSKKEVGSFQSDFANRKGKAVIGGEGIDFQRSTTEKAVQSRQQSRMIETMQGLS
SDVLAEIREDRSEKVKKQVVNSGLGEVLGFVESGVSIGPELVEQLEKEKKVASGLESTVGLDKKWEVGEGIHLVANIDCSKKILLPDQNGLEKKENSCNLGHEFWKISGI
KMPAQIGLEEKGKNLADEFFENGKGSKDNFKENGSVALSAKDPWKEVKVANIIGEGNKWDTKLIKSIFSREEANAICGIPLGSLERRIVLAGDLCQDS