; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001488 (gene) of Chayote v1 genome

Gene IDSed0001488
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase RHA2B-like
Genome locationLG10:6643091..6644808
RNA-Seq ExpressionSed0001488
SyntenySed0001488
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036272.1 putative E3 ubiquitin-protein ligase RHA2B [Cucumis melo var. makuwa]1.2e-7791.14Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT VFFTLLLLEFVILIRTIFGL+PNAD  VITTAQFLKLIEDKNPTIRFSNK+  + AD CAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY
        CLDNWLKLC ATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEEL+FLLSALHGNS+Y
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY

XP_022132528.1 E3 ubiquitin-protein ligase RHA2B-like [Momordica charantia]1.2e-7789.87Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT VFFTLLLLEFVILIRTIFGL+P AD  VITT Q+ KLIE++NPTIRFSNKL S+PAD CAVCLSEFEEGDKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY
        CLDNWLKLC ATCPLCRSKVLPDD+VAGYHRLRDRVEYDGSDEEL+FLLSALHGNSIY
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY

XP_022963436.1 E3 ubiquitin-protein ligase RHA2B-like isoform X1 [Cucurbita moschata]3.4e-7789.24Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT VFFTLL+LE VIL+RTIFGL+PN D  VI TAQFLKLIE+KNPTIRFSNK+ S+PAD CAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY
        CLDNWLKLC ATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEEL+FLLSALHGNSIY
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY

XP_023003552.1 E3 ubiquitin-protein ligase RHA2B-like isoform X1 [Cucurbita maxima]4.1e-7587.34Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT  F TLL+LE VIL+RTIFGL+PN D  VI TAQFLKLIE+KNPTIRFSNK+ S+PAD CAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY
        CLDNWLKLC ATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEEL+FLLSALHGNSIY
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY

XP_038883588.1 E3 ubiquitin-protein ligase RHA2B-like [Benincasa hispida]8.3e-7691.56Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT VFFTLLLLEFVILIRTIFGL+PNAD  V+TTAQFLKLIE+KNPTIRFSNKL S+ AD CAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHG
        CLDNWLKLC ATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEEL+FLLSALHG
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHG

TrEMBL top hitse value%identityAlignment
A0A0A0KM08 RING-type domain-containing protein1.6e-7790.51Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT VFFTLLLLEFVILIRTIFGL+PN+D  VITTAQF KLIEDKNPTIRFSNK+  + AD CAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY
        CLDNWLKLC ATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEEL+FLLSALHGNSIY
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY

A0A5A7SYH1 Putative E3 ubiquitin-protein ligase RHA2B5.6e-7891.14Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT VFFTLLLLEFVILIRTIFGL+PNAD  VITTAQFLKLIEDKNPTIRFSNK+  + AD CAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY
        CLDNWLKLC ATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEEL+FLLSALHGNS+Y
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY

A0A6J1BWI1 E3 ubiquitin-protein ligase RHA2B-like5.6e-7889.87Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT VFFTLLLLEFVILIRTIFGL+P AD  VITT Q+ KLIE++NPTIRFSNKL S+PAD CAVCLSEFEEGDKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY
        CLDNWLKLC ATCPLCRSKVLPDD+VAGYHRLRDRVEYDGSDEEL+FLLSALHGNSIY
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY

A0A6J1HG49 E3 ubiquitin-protein ligase RHA2B-like isoform X11.6e-7789.24Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT VFFTLL+LE VIL+RTIFGL+PN D  VI TAQFLKLIE+KNPTIRFSNK+ S+PAD CAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY
        CLDNWLKLC ATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEEL+FLLSALHGNSIY
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY

A0A6J1KMW2 E3 ubiquitin-protein ligase RHA2B-like isoform X12.0e-7587.34Show/hide
Query:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD
        MGALSEFFSHLHTMT  F TLL+LE VIL+RTIFGL+PN D  VI TAQFLKLIE+KNPTIRFSNK+ S+PAD CAVCLSEFEEG+KVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKD

Query:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY
        CLDNWLKLC ATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEEL+FLLSALHGNSIY
Subjt:  CLDNWLKLCLATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY

SwissProt top hitse value%identityAlignment
Q0VD51 E3 ubiquitin-protein ligase RNF133.3e-1152Show/hide
Query:  DHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLP
        D CA+CL E+E+GDK+R L C+H +H  C+D WL     TCP+C+ KV+P
Subjt:  DHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLP

Q8LPN7 E3 ubiquitin-protein ligase RING1-like2.6e-1140.58Show/hide
Query:  DKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDD
        D  PT++ +  +  +  + CAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  DKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDD

Q90972 E3 ubiquitin-protein ligase RNF133.3e-1152Show/hide
Query:  DHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLP
        D CA+CL E+E+GDK+R L C+H +H  C+D WL     TCP+C+ KV+P
Subjt:  DHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLP

Q9ZT50 E3 ubiquitin-protein ligase RHA2A4.7e-1354.39Show/hide
Query:  CAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDDIVAGYHR
        C VCLS+ +EG++VRKL+C H FHK CL+ WL     TCPLCRS ++ DD V+   R
Subjt:  CAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDDIVAGYHR

Q9ZU51 E3 ubiquitin-protein ligase RHA2B8.5e-1540.59Show/hide
Query:  LLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVL
        LL  F   +R++  L P++   V+ T+    L +  N    FS + + N A  C VCLS+ + G++VRKL C H FHK CL+ WL+     CPLCRS +L
Subjt:  LLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVL

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A3.3e-1454.39Show/hide
Query:  CAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDDIVAGYHR
        C VCLS+ +EG++VRKL+C H FHK CL+ WL     TCPLCRS ++ DD V+   R
Subjt:  CAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDDIVAGYHR

AT2G01150.1 RING-H2 finger protein 2B6.0e-1640.59Show/hide
Query:  LLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVL
        LL  F   +R++  L P++   V+ T+    L +  N    FS + + N A  C VCLS+ + G++VRKL C H FHK CL+ WL+     CPLCRS +L
Subjt:  LLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVL

Query:  P
        P
Subjt:  P

AT3G19950.1 RING/U-box superfamily protein1.8e-1240.58Show/hide
Query:  DKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDD
        D  PT++ +  +  +  + CAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  DKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDD

AT4G00305.1 RING/U-box superfamily protein4.1e-1240.28Show/hide
Query:  IEDKNPTIRFSN-KLASNPADHCAVCLSEFEEGDKVRKLQ-CNHTFHKDCLDNWLKLCLATCPLCRSKVLPD
        ++D  P  +F +     NP + C +C  EF+ GD+VR L+ C H +HK C+D W++    TCPLCR+ ++PD
Subjt:  IEDKNPTIRFSN-KLASNPADHCAVCLSEFEEGDKVRKLQ-CNHTFHKDCLDNWLKLCLATCPLCRSKVLPD

AT5G45290.1 RING/U-box superfamily protein1.8e-1241.43Show/hide
Query:  IRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDDIVAGYH
        I+   K  S     C +CL E+EE D +R L C+H FHK C+D WLK     CPLCR  +   D  +  H
Subjt:  IRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCLATCPLCRSKVLPDDIVAGYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTCTCTCCGAGTTCTTCTCTCACCTCCACACAATGACCACCGTCTTCTTCACCCTCCTACTCCTCGAATTCGTCATTCTCATCCGCACGATCTTCGGCCTGAA
ACCCAACGCCGACAACTGCGTGATCACGACGGCGCAGTTCTTGAAGCTGATCGAGGACAAGAATCCGACGATTCGATTCTCCAACAAGCTCGCCTCCAATCCCGCCGACC
ACTGCGCCGTTTGCCTCTCCGAATTCGAGGAAGGCGACAAGGTACGGAAATTGCAATGCAACCACACTTTCCACAAGGACTGCCTCGACAACTGGCTGAAACTCTGTTTG
GCTACTTGTCCGCTCTGCCGGAGTAAGGTTTTGCCGGACGATATCGTCGCCGGTTACCACCGGCTGCGGGATCGCGTGGAGTACGACGGCAGCGACGAGGAGCTTGTCTT
TCTCTTGTCGGCATTACATGGTAACAGTATATACTGA
mRNA sequenceShow/hide mRNA sequence
CTTTGTTATAAAATTAAAAGAATTGAATGATTAGAATGTATCCGTTCATCTCTATCAGGCAGCCATGGGAGCTCTCTCCGAGTTCTTCTCTCACCTCCACACAATGACCA
CCGTCTTCTTCACCCTCCTACTCCTCGAATTCGTCATTCTCATCCGCACGATCTTCGGCCTGAAACCCAACGCCGACAACTGCGTGATCACGACGGCGCAGTTCTTGAAG
CTGATCGAGGACAAGAATCCGACGATTCGATTCTCCAACAAGCTCGCCTCCAATCCCGCCGACCACTGCGCCGTTTGCCTCTCCGAATTCGAGGAAGGCGACAAGGTACG
GAAATTGCAATGCAACCACACTTTCCACAAGGACTGCCTCGACAACTGGCTGAAACTCTGTTTGGCTACTTGTCCGCTCTGCCGGAGTAAGGTTTTGCCGGACGATATCG
TCGCCGGTTACCACCGGCTGCGGGATCGCGTGGAGTACGACGGCAGCGACGAGGAGCTTGTCTTTCTCTTGTCGGCATTACATGGTAACAGTATATACTGATTTTTCTAG
AGCCAAATATATATATAGTTATAGTTTCATTTTGTTTGTTTGTTCATCACAGAATAGAATCAAATAGCCTTTAGAATGTTGATTTCTGTAGATTAATTAGGGAAATATTG
TTTTCTGGTTTGGTTGATCTGTGGCTAGATCGAGTAAAATCGTGTGCGTTTATTTACCTGCAATTACTCTACCCAACTGTTTGATGCTTTGTTGCATGATTGCTTCCTAC
ATTTCCTGGATATTCGTCAACGAGAGTTTAATTTTGGGGACAACTTGTTTACATCTTGACAGGGACCTGAAATCTTGCCCTAAATGATCCAAATCACAAAAACTTTCCTC
CACAAGGGAGTTTACTTGGCCTGATTTCAAAGGGTCTTTCAAAAACAATTCTTTGATGTTAGTTTGGTGATCCATTAAGGGGCTTCTTATCTTTGTAGGGCCAGGAGTTA
TAGAACTTGTACTCATGGTAGATGAGAGTTGAAGACCTTATTTATGGTGCTGTTGGTATGTGAAGGCATTTATTAAGAACTTATAGGGATTTGAGAGAGGAGGCCATCCA
AGTTTAAAAGAGTTTTCCTGCCAACAATGCCTAGCACTACTTTACCTCAAGTATTGGCTTATTAATGTTCATGAGTTCGAATTCCCGACCCGAATGTCTTTTTATAGAGT
TTCACTTTATATTTCCGTGAGTATAGCTGGAGATGGTAGGAGAAGGACTCAATGCTCTCTTTGCGACCGAAAAGAGCAATACTTGCCTCCTTAAAGGAGACAAACGCTTC
TTAAGGGTGACGTGACACCATTTGGTGTCACAAATTTGTTATCTTATTTTAAAATACATTGTTGAAACAAAAAAATTATGGCACCAAATAGTGCTACATTATCCTTAAGG
AGGGCTTGCTTCCTTAGTCACAAGAGGAAATTATTTTTTCAAAATCTATCTTGGTATTAGAGCAAAACGTCTTGGCAGGCCCTAACCCGAACCCTCTCAAGTCTCATCCC
AGCAGCTTCTACCCCTCTTTTTTTGTTGACTACTCATGTTTGTTCAATCTCATCTCTACTTTTTGAACACCCATCAACATATGAGGGAAACTGAGAACATGCTTAGCTCT
CTAAACCAAAGTTTAAGGCTGATTAGGCAACATGTAAATAAGTTCATTGTGTAGCTCTTCACATTTTC
Protein sequenceShow/hide protein sequence
MGALSEFFSHLHTMTTVFFTLLLLEFVILIRTIFGLKPNADNCVITTAQFLKLIEDKNPTIRFSNKLASNPADHCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCL
ATCPLCRSKVLPDDIVAGYHRLRDRVEYDGSDEELVFLLSALHGNSIY